RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 FAM107BQ9H098 131 aa14.26□□□□□ -0.13
AMBRA1-212ENST00000534300 TTC21AQ8NDW8 1320 aa14.25□□□□□ -0.13
AMBRA1-212ENST00000534300 SYCE3A1L190 88 aa14.25□□□□□ -0.13
AMBRA1-212ENST00000534300 SURF6O75683 361 aaKnown RBP14.25□□□□□ -0.13
AMBRA1-212ENST00000534300 LARP1BQ659C4 914 aaKnown RBP14.25□□□□□ -0.13
AMBRA1-212ENST00000534300 FAM177A1Q8N128 213 aaPredicted RBP14.25□□□□□ -0.13
AMBRA1-212ENST00000534300 NECTIN2Q92692 538 aa14.25□□□□□ -0.13
AMBRA1-212ENST00000534300 PRKAR2BP31323 418 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 ME1P48163 572 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 CFAP45Q9UL16 551 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 BCAR3O75815 825 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 TXLNAP40222 546 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 TCEAL9Q9UHQ7 104 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 EXOSC9Q06265 439 aaKnown RBP14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 DYDC1Q8WWB3 177 aa14.24□□□□□ -0.13
AMBRA1-212ENST00000534300 SHTN1A0MZ66 631 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 CLCN1P35523 988 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 WASHC4Q2M389 1173 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 CRACR2AQ9BSW2 395 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 PPP2R1AP30153 589 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 UPF3BQ9BZI7 483 aaKnown RBP14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 CENPHQ9H3R5 247 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 CCDC30Q5VVM6 783 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 ZNF652Q9Y2D9 606 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 ABCA8O94911 1581 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 SMTNL1A8MU46 457 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 CEBPZQ03701 1054 aaKnown RBP14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 SART3Q15020 963 aaKnown RBP14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 SPATA32Q96LK8 384 aa14.23□□□□□ -0.13
AMBRA1-212ENST00000534300 ACEP12821 1306 aa14.22□□□□□ -0.13
AMBRA1-212ENST00000534300 AIMP1Q12904 312 aaKnown RBP14.22□□□□□ -0.13
AMBRA1-212ENST00000534300 MVPQ14764 893 aaKnown RBP14.22□□□□□ -0.13
AMBRA1-212ENST00000534300 CHD1LQ86WJ1 897 aa14.22□□□□□ -0.13
AMBRA1-212ENST00000534300 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
AMBRA1-212ENST00000534300 PRIMPOLQ96LW4 560 aa14.22□□□□□ -0.13
AMBRA1-212ENST00000534300 SFPQP23246 707 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■□□□□ 11
AMBRA1-212ENST00000534300 RRS1Q15050 365 aaKnown RBP14.21□□□□□ -0.13
AMBRA1-212ENST00000534300 NEUROD6Q96NK8 337 aa14.21□□□□□ -0.13
AMBRA1-212ENST00000534300 NEFHP12036 1026 aa14.21□□□□□ -0.13
AMBRA1-212ENST00000534300 ZFYVE27Q5T4F4 411 aa14.21□□□□□ -0.13
AMBRA1-212ENST00000534300 ZSCAN12O43309 604 aa14.21□□□□□ -0.14
AMBRA1-212ENST00000534300 ZPR1O75312 459 aa14.21□□□□□ -0.14
AMBRA1-212ENST00000534300 SLAIN2Q9P270 581 aa14.21□□□□□ -0.14
AMBRA1-212ENST00000534300 SCAF11Q99590 1463 aaKnown RBP14.21□□□□□ -0.14
AMBRA1-212ENST00000534300 SAMD9Q5K651 1589 aa14.21□□□□□ -0.14
AMBRA1-212ENST00000534300 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.14
AMBRA1-212ENST00000534300 ATF7IPQ6VMQ6 1270 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 ATP2B1P20020 1258 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 ARHGAP29Q52LW3 1261 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 YEATS2Q9ULM3 1422 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 MAP9Q49MG5 647 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 GNAI2P04899 355 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 STIM1Q13586 685 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 ERC1Q8IUD2 1116 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 TMEM2Q9UHN6 1383 aa14.2□□□□□ -0.14
AMBRA1-212ENST00000534300 NEMFO60524 1076 aa14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 TIGD1Q96MW7 591 aa14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 TCOF1Q13428 1488 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 TSPOAP1O95153 1857 aa14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 FAM193AP78312 1265 aa14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 CDCA7Q9BWT1 371 aaPredicted RBP14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 LRRFIP2Q9Y608 721 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 PPP4R3BQ5MIZ7 849 aa14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 CCDC183Q5T5S1 534 aa14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 NOB1Q9ULX3 412 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-212ENST00000534300 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 TNNT1P13805 278 aa14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 MCM3P25205 808 aa14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 DDB1Q16531 1140 aa14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 DDX11Q96FC9 970 aa14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 CTDP1Q9Y5B0 961 aaPredicted RBP14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 TWISTNBQ3B726 338 aaPredicted RBP14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 TTC21BQ7Z4L5 1316 aa14.18□□□□□ -0.14
AMBRA1-212ENST00000534300 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 SEPT7Q16181 437 aaKnown RBP14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 NME9Q86XW9 330 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 ANKRD18AQ8IVF6 992 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 TRPM2O94759 1503 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 FAM177BA6PVY3 158 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 BMS1Q14692 1282 aaKnown RBP14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 BLOC1S2Q6QNY1 142 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 C11orf95C9JLR9 678 aaPredicted RBP14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 JAKMIP3Q5VZ66 844 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 TAX1BP1Q86VP1 789 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 TEX13AQ9BXU3 409 aaPredicted RBP14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
AMBRA1-212ENST00000534300 URI1O94763 535 aaPredicted RBP14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 ENOX2Q16206 610 aaKnown RBP14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
AMBRA1-212ENST00000534300 FCHSD2O94868 740 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms