RNA–Protein interactions for RNA: ENST00000533990.1

XRRA1-218, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 3

Gene XRRA1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-218ENST00000533990 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
XRRA1-218ENST00000533990 VIRMAQ69YN4 1812 aaKnown RBP15.2■□□□□ 0.02
XRRA1-218ENST00000533990 KDM6AO15550 1401 aaPredicted RBP15.19■□□□□ 0.02
XRRA1-218ENST00000533990 TMF1P82094 1093 aa15.19■□□□□ 0.02
XRRA1-218ENST00000533990 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
XRRA1-218ENST00000533990 CD2APQ9Y5K6 639 aa15.19■□□□□ 0.02
XRRA1-218ENST00000533990 ZNF831Q5JPB2 1677 aa15.19■□□□□ 0.02
XRRA1-218ENST00000533990 LOC102724428A0A0B4J2F2 783 aa15.18■□□□□ 0.02
XRRA1-218ENST00000533990 SIK1P57059 783 aa15.18■□□□□ 0.02
XRRA1-218ENST00000533990 AK7Q96M32 723 aa15.18■□□□□ 0.02
XRRA1-218ENST00000533990 KIF24Q5T7B8 1368 aa15.18■□□□□ 0.02
XRRA1-218ENST00000533990 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
XRRA1-218ENST00000533990 GRIN3BO60391 1043 aa15.16■□□□□ 0.02
XRRA1-218ENST00000533990 ATG3Q9NT62 314 aa15.16■□□□□ 0.02
XRRA1-218ENST00000533990 POLKQ9UBT6 870 aa15.16■□□□□ 0.02
XRRA1-218ENST00000533990 C10orf71Q711Q0 1435 aa15.16■□□□□ 0.02
XRRA1-218ENST00000533990 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
XRRA1-218ENST00000533990 KIF3CO14782 793 aa15.15■□□□□ 0.02
XRRA1-218ENST00000533990 GNPATO15228 680 aa15.15■□□□□ 0.02
XRRA1-218ENST00000533990 PHKG2P15735 406 aa15.15■□□□□ 0.02
XRRA1-218ENST00000533990 EIF4A2Q14240 407 aaKnown RBP15.15■□□□□ 0.02
XRRA1-218ENST00000533990 WASHC2AQ641Q2 1341 aa15.15■□□□□ 0.02
XRRA1-218ENST00000533990 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
XRRA1-218ENST00000533990 TNNT2P45379 298 aaPredicted RBP15.13■□□□□ 0.01
XRRA1-218ENST00000533990 SBF1O95248 1867 aa15.12■□□□□ 0.01
XRRA1-218ENST00000533990 MMP10P09238 476 aa15.12■□□□□ 0.01
XRRA1-218ENST00000533990 SSFA2P28290 1259 aa15.12■□□□□ 0.01
XRRA1-218ENST00000533990 AEBP1Q8IUX7 1158 aa15.12■□□□□ 0.01
XRRA1-218ENST00000533990 SMARCC1Q92922 1105 aaPredicted RBP15.12■□□□□ 0.01
XRRA1-218ENST00000533990 GPBP1L1Q9HC44 474 aaPredicted RBP15.12■□□□□ 0.01
XRRA1-218ENST00000533990 AFDNP55196 1824 aaKnown RBP15.11■□□□□ 0.01
XRRA1-218ENST00000533990 ATP6V1AP38606 617 aa15.11■□□□□ 0.01
XRRA1-218ENST00000533990 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
XRRA1-218ENST00000533990 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
XRRA1-218ENST00000533990 WDR90Q96KV7 1748 aa15.1■□□□□ 0.01
XRRA1-218ENST00000533990 HSPA6P17066 643 aa15.1■□□□□ 0.01
XRRA1-218ENST00000533990 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
XRRA1-218ENST00000533990 A0A0G2JLW4 131 aa15.09■□□□□ 0.01
XRRA1-218ENST00000533990 SRP68Q9UHB9 627 aaKnown RBP15.08■□□□□ 0
XRRA1-218ENST00000533990 SPG7Q9UQ90 795 aa15.08■□□□□ 0
XRRA1-218ENST00000533990 GYS1P13807 737 aa15.07■□□□□ 0
XRRA1-218ENST00000533990 DPEP1P16444 411 aa15.07■□□□□ 0
XRRA1-218ENST00000533990 KCNA3P22001 575 aa15.07■□□□□ 0
XRRA1-218ENST00000533990 ARHGEF1Q92888 912 aaKnown RBP15.07■□□□□ 0
XRRA1-218ENST00000533990 NMRK2Q9NPI5 230 aa15.07■□□□□ 0
XRRA1-218ENST00000533990 HTRA3P83110 453 aa15.06■□□□□ 0
XRRA1-218ENST00000533990 DDR1Q08345 913 aa15.06■□□□□ 0
XRRA1-218ENST00000533990 IFNL2Q8IZJ0 200 aa15.06■□□□□ 0
XRRA1-218ENST00000533990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.06■□□□□ 0
XRRA1-218ENST00000533990 KCPQ6ZWJ8 1503 aa15.06■□□□□ 0
XRRA1-218ENST00000533990 DLEC1Q9Y238 1755 aa15.06■□□□□ 0
XRRA1-218ENST00000533990 POLR3GLQ9BT43 218 aa15.05■□□□□ -0
XRRA1-218ENST00000533990 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
XRRA1-218ENST00000533990 BCS1LQ9Y276 419 aa15.05■□□□□ -0
XRRA1-218ENST00000533990 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
XRRA1-218ENST00000533990 CCDC88AQ3V6T2 1871 aa15.05■□□□□ -0
XRRA1-218ENST00000533990 CNTNAP4Q9C0A0 1308 aa15.04■□□□□ -0
XRRA1-218ENST00000533990 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
XRRA1-218ENST00000533990 ANKRD31Q8N7Z5 1873 aa15.03■□□□□ -0
XRRA1-218ENST00000533990 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
XRRA1-218ENST00000533990 COL11A2P13942 1736 aaPredicted RBP15.03■□□□□ -0
XRRA1-218ENST00000533990 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
XRRA1-218ENST00000533990 MRC1P22897 1456 aa15.02■□□□□ -0
XRRA1-218ENST00000533990 FKBP8Q14318 412 aa15.02■□□□□ -0
XRRA1-218ENST00000533990 ZNF530Q6P9A1 599 aaPredicted RBP15.02■□□□□ -0
XRRA1-218ENST00000533990 PTCD1O75127 700 aaKnown RBP15.01□□□□□ -0.01
XRRA1-218ENST00000533990 PRELPP51888 382 aa15.01□□□□□ -0.01
XRRA1-218ENST00000533990 CDCA8Q53HL2 280 aa15.01□□□□□ -0.01
XRRA1-218ENST00000533990 DNAJC5GQ8N7S2 189 aa15.01□□□□□ -0.01
XRRA1-218ENST00000533990 RTCBQ9Y3I0 505 aaKnown RBP15.01□□□□□ -0.01
XRRA1-218ENST00000533990 SLC24A1O60721 1099 aa15□□□□□ -0.01
XRRA1-218ENST00000533990 RPS6KA4O75676 772 aa15□□□□□ -0.01
XRRA1-218ENST00000533990 CHRNA5P30532 468 aa15□□□□□ -0.01
XRRA1-218ENST00000533990 CRKLP46109 303 aaKnown RBP15□□□□□ -0.01
XRRA1-218ENST00000533990 TNRC6CQ9HCJ0 1690 aaKnown RBP15□□□□□ -0.01
XRRA1-218ENST00000533990 CACNA1SQ13698 1873 aa14.99□□□□□ -0.01
XRRA1-218ENST00000533990 CARMIL3Q8ND23 1372 aa14.99□□□□□ -0.01
XRRA1-218ENST00000533990 USP42Q9H9J4 1324 aaKnown RBP14.99□□□□□ -0.01
XRRA1-218ENST00000533990 CAPN15O75808 1086 aa14.99□□□□□ -0.01
XRRA1-218ENST00000533990 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
XRRA1-218ENST00000533990 TRAPPC3LQ5T215 181 aa14.99□□□□□ -0.01
XRRA1-218ENST00000533990 INTS5Q6P9B9 1019 aaKnown RBP14.99□□□□□ -0.01
XRRA1-218ENST00000533990 PANK3Q9H999 370 aa14.99□□□□□ -0.01
XRRA1-218ENST00000533990 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
XRRA1-218ENST00000533990 PCNTO95613 3336 aa14.98□□□□□ -0.01
XRRA1-218ENST00000533990 ERVV-2B6SEH9 535 aa14.98□□□□□ -0.01
XRRA1-218ENST00000533990 FCHSD2O94868 740 aa14.98□□□□□ -0.01
XRRA1-218ENST00000533990 RC3H1Q5TC82 1133 aaKnown RBP14.98□□□□□ -0.01
XRRA1-218ENST00000533990 ARHGAP27Q6ZUM4 889 aa14.98□□□□□ -0.01
XRRA1-218ENST00000533990 DCAF5Q96JK2 942 aa14.98□□□□□ -0.01
XRRA1-218ENST00000533990 RASSF7Q02833 373 aa14.97□□□□□ -0.01
XRRA1-218ENST00000533990 C9orf131Q5VYM1 1079 aa14.97□□□□□ -0.01
XRRA1-218ENST00000533990 NFATC2IPQ8NCF5 419 aa14.97□□□□□ -0.01
XRRA1-218ENST00000533990 PLEKHG2Q9H7P9 1386 aa14.97□□□□□ -0.01
XRRA1-218ENST00000533990 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
XRRA1-218ENST00000533990 TGFB2P61812 414 aa14.96□□□□□ -0.01
XRRA1-218ENST00000533990 DNAJC10Q8IXB1 793 aa14.96□□□□□ -0.01
XRRA1-218ENST00000533990 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
XRRA1-218ENST00000533990 POLRMTO00411 1230 aaKnown RBP14.95□□□□□ -0.02
XRRA1-218ENST00000533990 IL13P35225 146 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms