RNA–Protein interactions for RNA: ENST00000533990.1

XRRA1-218, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 3

Gene XRRA1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-218ENST00000533990 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
XRRA1-218ENST00000533990 ABCC9O60706 1549 aa25.45■■□□□ 1.66
XRRA1-218ENST00000533990 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
XRRA1-218ENST00000533990 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
XRRA1-218ENST00000533990 DNAJC5BQ9UF47 199 aa24.12■■□□□ 1.45
XRRA1-218ENST00000533990 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
XRRA1-218ENST00000533990 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
XRRA1-218ENST00000533990 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
XRRA1-218ENST00000533990 NACADO15069 1562 aa23.78■■□□□ 1.4
XRRA1-218ENST00000533990 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
XRRA1-218ENST00000533990 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
XRRA1-218ENST00000533990 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
XRRA1-218ENST00000533990 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
XRRA1-218ENST00000533990 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.3
XRRA1-218ENST00000533990 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
XRRA1-218ENST00000533990 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
XRRA1-218ENST00000533990 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
XRRA1-218ENST00000533990 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
XRRA1-218ENST00000533990 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
XRRA1-218ENST00000533990 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
XRRA1-218ENST00000533990 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
XRRA1-218ENST00000533990 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
XRRA1-218ENST00000533990 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
XRRA1-218ENST00000533990 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
XRRA1-218ENST00000533990 NESP48681 1621 aa21.89■■□□□ 1.09
XRRA1-218ENST00000533990 CUX2O14529 1486 aa21.85■■□□□ 1.09
XRRA1-218ENST00000533990 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
XRRA1-218ENST00000533990 ERCC6Q03468 1493 aa21.83■■□□□ 1.08
XRRA1-218ENST00000533990 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
XRRA1-218ENST00000533990 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
XRRA1-218ENST00000533990 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
XRRA1-218ENST00000533990 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
XRRA1-218ENST00000533990 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
XRRA1-218ENST00000533990 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
XRRA1-218ENST00000533990 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
XRRA1-218ENST00000533990 LAMC3Q9Y6N6 1575 aa21.52■■□□□ 1.04
XRRA1-218ENST00000533990 WIZO95785 1651 aa21.44■■□□□ 1.02
XRRA1-218ENST00000533990 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
XRRA1-218ENST00000533990 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
XRRA1-218ENST00000533990 WDR62O43379 1518 aa21.26■□□□□ 0.99
XRRA1-218ENST00000533990 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
XRRA1-218ENST00000533990 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
XRRA1-218ENST00000533990 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
XRRA1-218ENST00000533990 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
XRRA1-218ENST00000533990 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
XRRA1-218ENST00000533990 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
XRRA1-218ENST00000533990 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
XRRA1-218ENST00000533990 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
XRRA1-218ENST00000533990 CFTRP13569 1480 aa21.03■□□□□ 0.96
XRRA1-218ENST00000533990 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
XRRA1-218ENST00000533990 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
XRRA1-218ENST00000533990 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
XRRA1-218ENST00000533990 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
XRRA1-218ENST00000533990 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
XRRA1-218ENST00000533990 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
XRRA1-218ENST00000533990 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
XRRA1-218ENST00000533990 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
XRRA1-218ENST00000533990 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
XRRA1-218ENST00000533990 EIF4G3O43432 1585 aaKnown RBP20.7■□□□□ 0.9
XRRA1-218ENST00000533990 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
XRRA1-218ENST00000533990 CHD1O14646 1710 aa20.64■□□□□ 0.89
XRRA1-218ENST00000533990 TARBP1Q13395 1621 aaKnown RBP20.62■□□□□ 0.89
XRRA1-218ENST00000533990 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
XRRA1-218ENST00000533990 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
XRRA1-218ENST00000533990 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.88
XRRA1-218ENST00000533990 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
XRRA1-218ENST00000533990 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
XRRA1-218ENST00000533990 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
XRRA1-218ENST00000533990 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
XRRA1-218ENST00000533990 CUX1P39880 1505 aa20.36■□□□□ 0.85
XRRA1-218ENST00000533990 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
XRRA1-218ENST00000533990 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
XRRA1-218ENST00000533990 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
XRRA1-218ENST00000533990 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.85
XRRA1-218ENST00000533990 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
XRRA1-218ENST00000533990 CYB5RLQ6IPT4 315 aa20.33■□□□□ 0.85
XRRA1-218ENST00000533990 SOGA1O94964 1423 aa20.27■□□□□ 0.84
XRRA1-218ENST00000533990 FBLN2P98095 1184 aa20.26■□□□□ 0.83
XRRA1-218ENST00000533990 PBRM1Q86U86 1689 aa20.24■□□□□ 0.83
XRRA1-218ENST00000533990 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
XRRA1-218ENST00000533990 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
XRRA1-218ENST00000533990 ABCA5Q8WWZ7 1642 aa20.15■□□□□ 0.82
XRRA1-218ENST00000533990 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
XRRA1-218ENST00000533990 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
XRRA1-218ENST00000533990 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
XRRA1-218ENST00000533990 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
XRRA1-218ENST00000533990 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
XRRA1-218ENST00000533990 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
XRRA1-218ENST00000533990 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
XRRA1-218ENST00000533990 CEP170Q5SW79 1584 aa20.01■□□□□ 0.79
XRRA1-218ENST00000533990 ADAMTS12P58397 1594 aa20■□□□□ 0.79
XRRA1-218ENST00000533990 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
XRRA1-218ENST00000533990 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
XRRA1-218ENST00000533990 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
XRRA1-218ENST00000533990 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
XRRA1-218ENST00000533990 NUP160Q12769 1436 aa19.89■□□□□ 0.77
XRRA1-218ENST00000533990 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
XRRA1-218ENST00000533990 KIF13AQ9H1H9 1805 aa19.83■□□□□ 0.77
XRRA1-218ENST00000533990 FOXD1Q16676 465 aa19.81■□□□□ 0.76
XRRA1-218ENST00000533990 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms