RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 ZNF394Q53GI3 561 aa6.15□□□□□ -1.42
C11orf54-213ENST00000533585 RETREG3Q86VR2 466 aa6.15□□□□□ -1.42
C11orf54-213ENST00000533585 PCDHGB7Q9Y5F8 929 aa6.15□□□□□ -1.42
C11orf54-213ENST00000533585 COL9A1P20849 921 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 SETQ01105 290 aaPredicted RBP6.14□□□□□ -1.43
C11orf54-213ENST00000533585 PTK2Q05397 1052 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 FUT2Q10981 343 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 AAMPQ13685 434 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 USP48Q86UV5 1035 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 FMNL3Q8IVF7 1028 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 RPUSD2Q8IZ73 545 aaKnown RBP6.14□□□□□ -1.43
C11orf54-213ENST00000533585 SLKQ9H2G2 1235 aaPredicted RBP6.14□□□□□ -1.43
C11orf54-213ENST00000533585 DOLKQ9UPQ8 538 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 PRKAB1Q9Y478 270 aa6.14□□□□□ -1.43
C11orf54-213ENST00000533585 A0A0U1RQG5 324 aaPredicted RBP6.13□□□□□ -1.43
C11orf54-213ENST00000533585 KDM4FA0A1W2PPD8 638 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 SMAPO00193 183 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 MPSTP25325 297 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 WEE1P30291 646 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 RACK1P63244 317 aaKnown RBP6.13□□□□□ -1.43
C11orf54-213ENST00000533585 TSGA10IPQ3SY00 556 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 OXLD1Q5BKU9 147 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 COL26A1Q96A83 441 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 TERF2IPQ9NYB0 399 aa6.13□□□□□ -1.43
C11orf54-213ENST00000533585 MAFGO15525 162 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 ATN1P54259 1190 aaPredicted RBP6.12□□□□□ -1.43
C11orf54-213ENST00000533585 BIRC2Q13490 618 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 NBPF6Q5VWK0 638 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 ALG1LQ6GMV1 187 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 PRPF38AQ8NAV1 312 aaKnown RBP6.12□□□□□ -1.43
C11orf54-213ENST00000533585 JDP2Q8WYK2 163 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 MKL1Q969V6 931 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 NBPF4Q96M43 638 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 PURBQ96QR8 312 aaKnown RBP6.12□□□□□ -1.43
C11orf54-213ENST00000533585 SETDB2Q96T68 719 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 TMX1Q9H3N1 280 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 PRR12Q9ULL5 1215 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 GPSM3Q9Y4H4 160 aa6.12□□□□□ -1.43
C11orf54-213ENST00000533585 TRIM6-TRIM34B2RNG4 842 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 PRC1O43663 620 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 SH3BP5O60239 455 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 PDGFRBP09619 1106 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 GNA15P30679 374 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 ATP6V1AP38606 617 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 TBX4P57082 545 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 RHBDL3P58872 404 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 FAM50AQ14320 339 aaKnown RBP6.11□□□□□ -1.43
C11orf54-213ENST00000533585 PLEKHG4Q58EX7 1191 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 SP7Q8TDD2 431 aaPredicted RBP6.11□□□□□ -1.43
C11orf54-213ENST00000533585 STAG1Q8WVM7 1258 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 CRELD1Q96HD1 420 aa6.11□□□□□ -1.43
C11orf54-213ENST00000533585 SRPK1Q96SB4 655 aaKnown RBP6.11□□□□□ -1.43
C11orf54-213ENST00000533585 PNMA6FA0A0J9YX94 578 aa6.1□□□□□ -1.43
C11orf54-213ENST00000533585 ZBTB24O43167 697 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-213ENST00000533585 ATF4P18848 351 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-213ENST00000533585 ALKBH2Q6NS38 261 aa6.1□□□□□ -1.43
C11orf54-213ENST00000533585 HS2ST1Q7LGA3 356 aa6.1□□□□□ -1.43
C11orf54-213ENST00000533585 RNPC3Q96LT9 517 aaKnown RBP6.1□□□□□ -1.43
C11orf54-213ENST00000533585 FRMD6Q96NE9 622 aa6.1□□□□□ -1.43
C11orf54-213ENST00000533585 SRA1Q9HD15 236 aaKnown RBP6.1□□□□□ -1.43
C11orf54-213ENST00000533585 CCDC87Q9NVE4 849 aa6.1□□□□□ -1.43
C11orf54-213ENST00000533585 GEMIN8Q9NWZ8 242 aaKnown RBP6.1□□□□□ -1.43
C11orf54-213ENST00000533585 GPR182O15218 404 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 PPFIA4O75335 1185 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 GJA8P48165 433 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 SLC4A3P48751 1232 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 CHMP4BP1P59074 171 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 AMPD3Q01432 767 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 SERINC3Q13530 473 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 ENOX2Q16206 610 aaKnown RBP6.09□□□□□ -1.43
C11orf54-213ENST00000533585 SWT1Q5T5J6 900 aaKnown RBP6.09□□□□□ -1.43
C11orf54-213ENST00000533585 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 TSHZ1Q6ZSZ6 1077 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
C11orf54-213ENST00000533585 CCDC85AQ96PX6 553 aaPredicted RBP6.09□□□□□ -1.43
C11orf54-213ENST00000533585 RPS6KC1Q96S38 1066 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 NEUROD4Q9HD90 331 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 GGT7Q9UJ14 662 aa6.09□□□□□ -1.43
C11orf54-213ENST00000533585 LAS1LQ9Y4W2 734 aaKnown RBP6.09□□□□□ -1.43
C11orf54-213ENST00000533585 F12P00748 615 aaPredicted RBP6.08□□□□□ -1.44
C11orf54-213ENST00000533585 SSBP05455 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
C11orf54-213ENST00000533585 PAX3P23760 479 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 Q3C1V9 767 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 FOXD4L6Q3SYB3 417 aaPredicted RBP6.08□□□□□ -1.44
C11orf54-213ENST00000533585 ODR4Q5SWX8 454 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 PDXDC2PQ6P474 469 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 FOXD4L3Q6VB84 417 aaPredicted RBP6.08□□□□□ -1.44
C11orf54-213ENST00000533585 C3orf67Q6ZVT6 689 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 PPARGC1BQ86YN6 1023 aaKnown RBP6.08□□□□□ -1.44
C11orf54-213ENST00000533585 ALKBH8Q96BT7 664 aaKnown RBP6.08□□□□□ -1.44
C11orf54-213ENST00000533585 EVI5LQ96CN4 794 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 GPRASP2Q96D09 838 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 CEP89Q96ST8 783 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 FAM129BQ96TA1 746 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 PLCD4Q9BRC7 762 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 NIF3L1Q9GZT8 377 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 TYW1Q9NV66 732 aaKnown RBP6.08□□□□□ -1.44
C11orf54-213ENST00000533585 SIRPGQ9P1W8 387 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 MAP10Q9P2G4 905 aa6.08□□□□□ -1.44
C11orf54-213ENST00000533585 PCDHGA11Q9Y5H2 935 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms