RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
PMS2P3-208ENST00000533167 CT47B1P0C2W7 299 aaPredicted RBP11.09□□□□□ -0.63
PMS2P3-208ENST00000533167 KRT24Q2M2I5 525 aa11.09□□□□□ -0.63
PMS2P3-208ENST00000533167 C8orf58Q8NAV2 365 aa11.09□□□□□ -0.63
PMS2P3-208ENST00000533167 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 VAMP4O75379 141 aa11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 EIF4A1P60842 406 aaKnown RBP11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 TSPYL4Q9UJ04 414 aa11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
PMS2P3-208ENST00000533167 RBM6P78332 1123 aaKnown RBP11.07□□□□□ -0.64
PMS2P3-208ENST00000533167 TEFQ10587 303 aa11.07□□□□□ -0.64
PMS2P3-208ENST00000533167 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
PMS2P3-208ENST00000533167 LAS1LQ9Y4W2 734 aaKnown RBP11.07□□□□□ -0.64
PMS2P3-208ENST00000533167 RARSP54136 660 aaKnown RBP11.06□□□□□ -0.64
PMS2P3-208ENST00000533167 CABP4P57796 275 aa11.06□□□□□ -0.64
PMS2P3-208ENST00000533167 PIGBQ92521 554 aa11.06□□□□□ -0.64
PMS2P3-208ENST00000533167 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
PMS2P3-208ENST00000533167 KCPQ6ZWJ8 1503 aa11.05□□□□□ -0.64
PMS2P3-208ENST00000533167 BTBD11A6QL63 1104 aa11.05□□□□□ -0.64
PMS2P3-208ENST00000533167 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
PMS2P3-208ENST00000533167 SLC39A6Q13433 755 aa11.05□□□□□ -0.64
PMS2P3-208ENST00000533167 ZNF790Q6PG37 636 aa11.05□□□□□ -0.64
PMS2P3-208ENST00000533167 PAPPAQ13219 1627 aa11.05□□□□□ -0.64
PMS2P3-208ENST00000533167 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
PMS2P3-208ENST00000533167 ZNF428Q96B54 188 aa11.04□□□□□ -0.64
PMS2P3-208ENST00000533167 ZNF496Q96IT1 587 aaPredicted RBP11.04□□□□□ -0.64
PMS2P3-208ENST00000533167 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
PMS2P3-208ENST00000533167 RGS12O14924 1447 aa11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 GIGYF1O75420 1035 aaPredicted RBP11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 HOXB7P09629 217 aa11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 TWISTNBQ3B726 338 aaPredicted RBP11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 PTF1AQ7RTS3 328 aa11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 ATG3Q9NT62 314 aa11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 SUPT16HQ9Y5B9 1047 aaKnown RBP11.03□□□□□ -0.64
PMS2P3-208ENST00000533167 PRAMEF22A3QJZ6 481 aa11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 ELL2O00472 640 aaPredicted RBP11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 KCNQ2O43526 872 aa11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 BCAR3O75815 825 aa11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 ALDH1L2Q3SY69 923 aa11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 SLC4A9Q96Q91 983 aa11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 TMOD3Q9NYL9 352 aa11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.65
PMS2P3-208ENST00000533167 RXRBP28702 533 aa11.01□□□□□ -0.65
PMS2P3-208ENST00000533167 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
PMS2P3-208ENST00000533167 FAM182BQ5T319 152 aa11.01□□□□□ -0.65
PMS2P3-208ENST00000533167 MRPL50Q8N5N7 158 aaKnown RBP11.01□□□□□ -0.65
PMS2P3-208ENST00000533167 KRT27Q7Z3Y8 459 aa11□□□□□ -0.65
PMS2P3-208ENST00000533167 LRP10Q7Z4F1 713 aa11□□□□□ -0.65
PMS2P3-208ENST00000533167 ACSBG1Q96GR2 724 aa11□□□□□ -0.65
PMS2P3-208ENST00000533167 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
PMS2P3-208ENST00000533167 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
PMS2P3-208ENST00000533167 PDIA6Q15084 440 aa10.99□□□□□ -0.65
PMS2P3-208ENST00000533167 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
PMS2P3-208ENST00000533167 BCL2L13Q9BXK5 485 aa10.99□□□□□ -0.65
PMS2P3-208ENST00000533167 VIRMAQ69YN4 1812 aaKnown RBP10.99□□□□□ -0.65
PMS2P3-208ENST00000533167 SNRPA1P09661 255 aaKnown RBP10.98□□□□□ -0.65
PMS2P3-208ENST00000533167 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
PMS2P3-208ENST00000533167 TNNQ9UQP3 1299 aa10.98□□□□□ -0.65
PMS2P3-208ENST00000533167 USP16Q9Y5T5 823 aa10.98□□□□□ -0.65
PMS2P3-208ENST00000533167 A0A0G2JS52 829 aa10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 TCERG1O14776 1098 aaKnown RBP10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 PLIN1O60240 522 aa10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 MYT1Q01538 1121 aa10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 G2E3Q7L622 706 aa10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 NHSQ6T4R5 1651 aa10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 ITGB4P16144 1822 aa10.97□□□□□ -0.65
PMS2P3-208ENST00000533167 CICQ96RK0 1608 aaPredicted RBP10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 PALLDQ8WX93 1383 aa10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 PROSER3Q2NL68 480 aa10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 HDGFL1Q5TGJ6 251 aa10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 FAM196AQ6ZSG2 479 aa10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 TTC5Q8N0Z6 440 aa10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 ARHGAP45Q92619 1136 aa10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.65
PMS2P3-208ENST00000533167 BRWD3Q6RI45 1802 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 PTCD1O75127 700 aaKnown RBP10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 RLBP1P12271 317 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 TRIM27P14373 513 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 ITPK1Q13572 414 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 NBPF14Q5TI25 921 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 CCDC30Q5VVM6 783 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 DNAJC10Q8IXB1 793 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 NBPF15Q8N660 670 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 SYTL4Q96C24 671 aaPredicted RBP10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 CHPF2Q9P2E5 772 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 NOB1Q9ULX3 412 aaKnown RBP10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 C5P01031 1676 aa10.95□□□□□ -0.66
PMS2P3-208ENST00000533167 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
PMS2P3-208ENST00000533167 KIF16BQ96L93 1317 aa10.94□□□□□ -0.66
PMS2P3-208ENST00000533167 LOC102724428A0A0B4J2F2 783 aa10.94□□□□□ -0.66
PMS2P3-208ENST00000533167 CYP19A1P11511 503 aaPredicted RBP10.94□□□□□ -0.66
PMS2P3-208ENST00000533167 SIK1P57059 783 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms