RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 ZNF428Q96B54 188 aa26.17■■□□□ 1.78
GSDMD-212ENST00000533063 SLC52A2Q9HAB3 445 aa26.17■■□□□ 1.78
GSDMD-212ENST00000533063 KCNQ3O43525 872 aa26.16■■□□□ 1.78
GSDMD-212ENST00000533063 TNS2Q63HR2 1409 aa26.16■■□□□ 1.78
GSDMD-212ENST00000533063 BTBD11A6QL63 1104 aa26.16■■□□□ 1.78
GSDMD-212ENST00000533063 ALDH1L2Q3SY69 923 aa26.15■■□□□ 1.78
GSDMD-212ENST00000533063 BARGINQ6ZT62 677 aa26.15■■□□□ 1.78
GSDMD-212ENST00000533063 USP21Q9UK80 565 aa26.15■■□□□ 1.78
GSDMD-212ENST00000533063 NFATC2IPQ8NCF5 419 aa26.14■■□□□ 1.78
GSDMD-212ENST00000533063 SMC4Q9NTJ3 1288 aa26.14■■□□□ 1.78
GSDMD-212ENST00000533063 EIF4A1P60842 406 aaKnown RBP26.13■■□□□ 1.77
GSDMD-212ENST00000533063 MEX3CQ5U5Q3 659 aaKnown RBP26.13■■□□□ 1.77
GSDMD-212ENST00000533063 CDCA7Q9BWT1 371 aaPredicted RBP26.13■■□□□ 1.77
GSDMD-212ENST00000533063 CCDC9Q9Y3X0 531 aaKnown RBP26.13■■□□□ 1.77
GSDMD-212ENST00000533063 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.12■■□□□ 1.77
GSDMD-212ENST00000533063 BRPF1P55201 1214 aaPredicted RBP26.11■■□□□ 1.77
GSDMD-212ENST00000533063 AFF2P51816 1311 aa26.1■■□□□ 1.77
GSDMD-212ENST00000533063 EXOC5O00471 708 aa26.1■■□□□ 1.77
GSDMD-212ENST00000533063 MRPL50Q8N5N7 158 aaKnown RBP26.1■■□□□ 1.77
GSDMD-212ENST00000533063 FRAT1Q92837 279 aaPredicted RBP26.1■■□□□ 1.77
GSDMD-212ENST00000533063 HEG1Q9ULI3 1381 aa26.1■■□□□ 1.77
GSDMD-212ENST00000533063 ITGB4P16144 1822 aa26.1■■□□□ 1.77
GSDMD-212ENST00000533063 GLI3P10071 1580 aa26.09■■□□□ 1.77
GSDMD-212ENST00000533063 TCERG1O14776 1098 aaKnown RBP26.09■■□□□ 1.77
GSDMD-212ENST00000533063 ERICH6BQ5W0A0 696 aa26.09■■□□□ 1.77
GSDMD-212ENST00000533063 TNNQ9UQP3 1299 aa26.09■■□□□ 1.77
GSDMD-212ENST00000533063 PAPPAQ13219 1627 aa26.08■■□□□ 1.77
GSDMD-212ENST00000533063 ERVV-2B6SEH9 535 aa26.08■■□□□ 1.77
GSDMD-212ENST00000533063 CABP4P57796 275 aa26.07■■□□□ 1.76
GSDMD-212ENST00000533063 SLC39A6Q13433 755 aa26.07■■□□□ 1.76
GSDMD-212ENST00000533063 FAM98CQ17RN3 349 aaKnown RBP26.07■■□□□ 1.76
GSDMD-212ENST00000533063 ZNF790Q6PG37 636 aa26.07■■□□□ 1.76
GSDMD-212ENST00000533063 EXOC6Q8TAG9 804 aa26.07■■□□□ 1.76
GSDMD-212ENST00000533063 DDB1Q16531 1140 aa26.07■■□□□ 1.76
GSDMD-212ENST00000533063 NOB1Q9ULX3 412 aaKnown RBP26.07■■□□□ 1.76
GSDMD-212ENST00000533063 THSD7AQ9UPZ6 1657 aa26.06■■□□□ 1.76
GSDMD-212ENST00000533063 CRBNQ96SW2 442 aa26.06■■□□□ 1.76
GSDMD-212ENST00000533063 UBR2Q8IWV8 1755 aa26.06■■□□□ 1.76
GSDMD-212ENST00000533063 ATRNO75882 1429 aa26.05■■□□□ 1.76
GSDMD-212ENST00000533063 SOS1Q07889 1333 aaPredicted RBP26.05■■□□□ 1.76
GSDMD-212ENST00000533063 CACNA1FO60840 1977 aa26.05■■□□□ 1.76
GSDMD-212ENST00000533063 RLBP1P12271 317 aa26.04■■□□□ 1.76
GSDMD-212ENST00000533063 PDE3AQ14432 1141 aa26.04■■□□□ 1.76
GSDMD-212ENST00000533063 KIF16BQ96L93 1317 aa26.04■■□□□ 1.76
GSDMD-212ENST00000533063 C5P01031 1676 aa26.04■■□□□ 1.76
GSDMD-212ENST00000533063 CANXP27824 592 aaKnown RBP26.04■■□□□ 1.76
GSDMD-212ENST00000533063 DOT1LQ8TEK3 1739 aa26.04■■□□□ 1.76
GSDMD-212ENST00000533063 TRIM27P14373 513 aa26.03■■□□□ 1.76
GSDMD-212ENST00000533063 ZKSCAN2Q63HK3 967 aa26.03■■□□□ 1.76
GSDMD-212ENST00000533063 PANK1Q8TE04 598 aa26.03■■□□□ 1.76
GSDMD-212ENST00000533063 MARCH10Q8NA82 808 aaPredicted RBP26.02■■□□□ 1.76
GSDMD-212ENST00000533063 KAT6BQ8WYB5 2073 aa26.02■■□□□ 1.76
GSDMD-212ENST00000533063 GIGYF1O75420 1035 aaPredicted RBP26.02■■□□□ 1.76
GSDMD-212ENST00000533063 HOXB7P09629 217 aa26.02■■□□□ 1.76
GSDMD-212ENST00000533063 ATF7IPQ6VMQ6 1270 aa26.01■■□□□ 1.75
GSDMD-212ENST00000533063 GJD4Q96KN9 370 aaPredicted RBP26.01■■□□□ 1.75
GSDMD-212ENST00000533063 PRAMEF22A3QJZ6 481 aa26■■□□□ 1.75
GSDMD-212ENST00000533063 ZNF496Q96IT1 587 aaPredicted RBP26■■□□□ 1.75
GSDMD-212ENST00000533063 CLUAP1Q96AJ1 413 aa25.99■■□□□ 1.75
GSDMD-212ENST00000533063 KCPQ6ZWJ8 1503 aa25.99■■□□□ 1.75
GSDMD-212ENST00000533063 ARHGAP45Q92619 1136 aa25.98■■□□□ 1.75
GSDMD-212ENST00000533063 NECTIN2Q92692 538 aa25.98■■□□□ 1.75
GSDMD-212ENST00000533063 TRPC5Q9UL62 973 aaPredicted RBP25.98■■□□□ 1.75
GSDMD-212ENST00000533063 SLC4A2P04920 1241 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 HDGFL1Q5TGJ6 251 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 CCDC30Q5VVM6 783 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 FBXO41Q8TF61 875 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 PIGBQ92521 554 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 PPP4R2Q9NY27 417 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 BCL9O00512 1426 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 RGS12O14924 1447 aa25.97■■□□□ 1.75
GSDMD-212ENST00000533063 IPO8O15397 1037 aaKnown RBP25.96■■□□□ 1.75
GSDMD-212ENST00000533063 TMOD3Q9NYL9 352 aa25.96■■□□□ 1.75
GSDMD-212ENST00000533063 COG6Q9Y2V7 657 aa25.96■■□□□ 1.75
GSDMD-212ENST00000533063 G2E3Q7L622 706 aa25.95■■□□□ 1.75
GSDMD-212ENST00000533063 DZIP1LQ8IYY4 767 aaKnown RBP25.95■■□□□ 1.75
GSDMD-212ENST00000533063 TTC5Q8N0Z6 440 aa25.95■■□□□ 1.74
GSDMD-212ENST00000533063 ONECUT3O60422 494 aaPredicted RBP25.94■■□□□ 1.74
GSDMD-212ENST00000533063 EIF2S2P20042 333 aaKnown RBP25.94■■□□□ 1.74
GSDMD-212ENST00000533063 LAMB4A4D0S4 1761 aa25.93■■□□□ 1.74
GSDMD-212ENST00000533063 QTRT2Q9H974 415 aaKnown RBP25.93■■□□□ 1.74
GSDMD-212ENST00000533063 FMNL2Q96PY5 1086 aa25.93■■□□□ 1.74
GSDMD-212ENST00000533063 STK31Q9BXU1 1019 aa25.92■■□□□ 1.74
GSDMD-212ENST00000533063 PRIM1P49642 420 aaKnown RBP25.91■■□□□ 1.74
GSDMD-212ENST00000533063 FTSJ3Q8IY81 847 aaKnown RBP25.91■■□□□ 1.74
GSDMD-212ENST00000533063 CHPF2Q9P2E5 772 aa25.91■■□□□ 1.74
GSDMD-212ENST00000533063 ASAP1Q9ULH1 1129 aa25.91■■□□□ 1.74
GSDMD-212ENST00000533063 ABCC4O15439 1325 aa25.91■■□□□ 1.74
GSDMD-212ENST00000533063 TMEM57Q8N5G2 664 aa25.9■■□□□ 1.74
GSDMD-212ENST00000533063 ATG3Q9NT62 314 aa25.9■■□□□ 1.74
GSDMD-212ENST00000533063 PTPRCP08575 1304 aa25.9■■□□□ 1.74
GSDMD-212ENST00000533063 SNRPA1P09661 255 aaKnown RBP25.89■■□□□ 1.74
GSDMD-212ENST00000533063 MS4A1P11836 297 aa25.89■■□□□ 1.74
GSDMD-212ENST00000533063 MVPQ14764 893 aaKnown RBP25.89■■□□□ 1.74
GSDMD-212ENST00000533063 B4GALNT3Q6L9W6 998 aa25.88■■□□□ 1.73
GSDMD-212ENST00000533063 USP16Q9Y5T5 823 aa25.88■■□□□ 1.73
GSDMD-212ENST00000533063 A0A0G2JS52 829 aa25.88■■□□□ 1.73
GSDMD-212ENST00000533063 MYT1Q01538 1121 aa25.88■■□□□ 1.73
GSDMD-212ENST00000533063 FLIIQ13045 1269 aa25.87■■□□□ 1.73
GSDMD-212ENST00000533063 PROSER3Q2NL68 480 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms