RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 ITGB4P16144 1822 aa19.19■□□□□ 0.66
NXF1-214ENST00000533048 TSPYL4Q9UJ04 414 aa19.18■□□□□ 0.66
NXF1-214ENST00000533048 LAS1LQ9Y4W2 734 aaKnown RBP19.18■□□□□ 0.66
NXF1-214ENST00000533048 UBR2Q8IWV8 1755 aa19.17■□□□□ 0.66
NXF1-214ENST00000533048 MARCH10Q8NA82 808 aaPredicted RBP19.17■□□□□ 0.66
NXF1-214ENST00000533048 RBM6P78332 1123 aaKnown RBP19.16■□□□□ 0.66
NXF1-214ENST00000533048 EXOSC9Q06265 439 aaKnown RBP19.16■□□□□ 0.66
NXF1-214ENST00000533048 RGS17Q9UGC6 210 aaPredicted RBP19.15■□□□□ 0.66
NXF1-214ENST00000533048 SOS1Q07889 1333 aaPredicted RBP19.15■□□□□ 0.66
NXF1-214ENST00000533048 BTBD11A6QL63 1104 aa19.14■□□□□ 0.65
NXF1-214ENST00000533048 CABP4P57796 275 aa19.14■□□□□ 0.65
NXF1-214ENST00000533048 NFATC2IPQ8NCF5 419 aa19.14■□□□□ 0.65
NXF1-214ENST00000533048 ZNF428Q96B54 188 aa19.14■□□□□ 0.65
NXF1-214ENST00000533048 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
NXF1-214ENST00000533048 HEG1Q9ULI3 1381 aa19.14■□□□□ 0.65
NXF1-214ENST00000533048 BRWD3Q6RI45 1802 aa19.14■□□□□ 0.65
NXF1-214ENST00000533048 SEPT12Q8IYM1 358 aa19.13■□□□□ 0.65
NXF1-214ENST00000533048 MIS18AQ9NYP9 233 aa19.13■□□□□ 0.65
NXF1-214ENST00000533048 RNF123Q5XPI4 1314 aa19.13■□□□□ 0.65
NXF1-214ENST00000533048 NHSQ6T4R5 1651 aa19.11■□□□□ 0.65
NXF1-214ENST00000533048 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
NXF1-214ENST00000533048 ZNF790Q6PG37 636 aa19.11■□□□□ 0.65
NXF1-214ENST00000533048 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
NXF1-214ENST00000533048 KCPQ6ZWJ8 1503 aa19.1■□□□□ 0.65
NXF1-214ENST00000533048 A0A0G2JS52 829 aa19.1■□□□□ 0.65
NXF1-214ENST00000533048 VAMP4O75379 141 aa19.1■□□□□ 0.65
NXF1-214ENST00000533048 HOXB7P09629 217 aa19.1■□□□□ 0.65
NXF1-214ENST00000533048 MYT1Q01538 1121 aa19.1■□□□□ 0.65
NXF1-214ENST00000533048 TSPYL6Q8N831 410 aa19.1■□□□□ 0.65
NXF1-214ENST00000533048 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
NXF1-214ENST00000533048 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
NXF1-214ENST00000533048 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
NXF1-214ENST00000533048 TMOD3Q9NYL9 352 aa19.09■□□□□ 0.65
NXF1-214ENST00000533048 KCNQ3O43525 872 aa19.08■□□□□ 0.64
NXF1-214ENST00000533048 RARSP54136 660 aaKnown RBP19.08■□□□□ 0.64
NXF1-214ENST00000533048 KRT24Q2M2I5 525 aa19.08■□□□□ 0.64
NXF1-214ENST00000533048 CICQ96RK0 1608 aaPredicted RBP19.07■□□□□ 0.64
NXF1-214ENST00000533048 LAMB4A4D0S4 1761 aa19.07■□□□□ 0.64
NXF1-214ENST00000533048 RXRBP28702 533 aa19.07■□□□□ 0.64
NXF1-214ENST00000533048 PIGBQ92521 554 aa19.07■□□□□ 0.64
NXF1-214ENST00000533048 C5P01031 1676 aa19.07■□□□□ 0.64
NXF1-214ENST00000533048 RGS12O14924 1447 aa19.07■□□□□ 0.64
NXF1-214ENST00000533048 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
NXF1-214ENST00000533048 ALDH1L2Q3SY69 923 aa19.06■□□□□ 0.64
NXF1-214ENST00000533048 POTEAQ6S8J7 498 aa19.06■□□□□ 0.64
NXF1-214ENST00000533048 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
NXF1-214ENST00000533048 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
NXF1-214ENST00000533048 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
NXF1-214ENST00000533048 KAT6BQ8WYB5 2073 aa19.05■□□□□ 0.64
NXF1-214ENST00000533048 GIGYF1O75420 1035 aaPredicted RBP19.04■□□□□ 0.64
NXF1-214ENST00000533048 KRT27Q7Z3Y8 459 aa19.04■□□□□ 0.64
NXF1-214ENST00000533048 TTC5Q8N0Z6 440 aa19.04■□□□□ 0.64
NXF1-214ENST00000533048 ZNF496Q96IT1 587 aaPredicted RBP19.04■□□□□ 0.64
NXF1-214ENST00000533048 SUPT16HQ9Y5B9 1047 aaKnown RBP19.04■□□□□ 0.64
NXF1-214ENST00000533048 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
NXF1-214ENST00000533048 BTAF1O14981 1849 aa19.03■□□□□ 0.64
NXF1-214ENST00000533048 ELL2O00472 640 aaPredicted RBP19.03■□□□□ 0.64
NXF1-214ENST00000533048 SSH1Q8WYL5 1049 aa19.03■□□□□ 0.64
NXF1-214ENST00000533048 FMNL2Q96PY5 1086 aa19.03■□□□□ 0.64
NXF1-214ENST00000533048 CHMP4AQ9BY43 222 aa19.03■□□□□ 0.64
NXF1-214ENST00000533048 ATG3Q9NT62 314 aa19.02■□□□□ 0.64
NXF1-214ENST00000533048 RRP1P56182 461 aaKnown RBP19.01■□□□□ 0.63
NXF1-214ENST00000533048 ASAP1Q9ULH1 1129 aa19.01■□□□□ 0.63
NXF1-214ENST00000533048 BCAR3O75815 825 aa19■□□□□ 0.63
NXF1-214ENST00000533048 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
NXF1-214ENST00000533048 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
NXF1-214ENST00000533048 VSIG10Q8N0Z9 540 aa19■□□□□ 0.63
NXF1-214ENST00000533048 ACSBG1Q96GR2 724 aa19■□□□□ 0.63
NXF1-214ENST00000533048 SMC4Q9NTJ3 1288 aa19■□□□□ 0.63
NXF1-214ENST00000533048 KIF16BQ96L93 1317 aa19■□□□□ 0.63
NXF1-214ENST00000533048 SYTL4Q96C24 671 aaPredicted RBP18.99■□□□□ 0.63
NXF1-214ENST00000533048 TJP1Q07157 1748 aa18.99■□□□□ 0.63
NXF1-214ENST00000533048 KCNQ2O43526 872 aa18.98■□□□□ 0.63
NXF1-214ENST00000533048 HDGFL1Q5TGJ6 251 aa18.98■□□□□ 0.63
NXF1-214ENST00000533048 CCDC30Q5VVM6 783 aa18.98■□□□□ 0.63
NXF1-214ENST00000533048 MRPL50Q8N5N7 158 aaKnown RBP18.98■□□□□ 0.63
NXF1-214ENST00000533048 FAM182BQ5T319 152 aa18.97■□□□□ 0.63
NXF1-214ENST00000533048 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.97■□□□□ 0.63
NXF1-214ENST00000533048 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
NXF1-214ENST00000533048 BCL2L13Q9BXK5 485 aa18.97■□□□□ 0.63
NXF1-214ENST00000533048 LY75O60449 1722 aa18.97■□□□□ 0.63
NXF1-214ENST00000533048 PALLDQ8WX93 1383 aa18.95■□□□□ 0.62
NXF1-214ENST00000533048 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
NXF1-214ENST00000533048 BCL11BQ9C0K0 894 aaPredicted RBP18.95■□□□□ 0.62
NXF1-214ENST00000533048 ERBB4Q15303 1308 aa18.95■□□□□ 0.62
NXF1-214ENST00000533048 PTCD1O75127 700 aaKnown RBP18.94■□□□□ 0.62
NXF1-214ENST00000533048 ARHGAP45Q92619 1136 aa18.94■□□□□ 0.62
NXF1-214ENST00000533048 STK31Q9BXU1 1019 aa18.94■□□□□ 0.62
NXF1-214ENST00000533048 TEX13AQ9BXU3 409 aaPredicted RBP18.94■□□□□ 0.62
NXF1-214ENST00000533048 RREB1Q92766 1687 aa18.94■□□□□ 0.62
NXF1-214ENST00000533048 COL5A3P25940 1745 aaPredicted RBP18.94■□□□□ 0.62
NXF1-214ENST00000533048 PTF1AQ7RTS3 328 aa18.93■□□□□ 0.62
NXF1-214ENST00000533048 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
NXF1-214ENST00000533048 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
NXF1-214ENST00000533048 EP400Q96L91 3159 aa18.92■□□□□ 0.62
NXF1-214ENST00000533048 ZKSCAN2Q63HK3 967 aa18.92■□□□□ 0.62
NXF1-214ENST00000533048 USP16Q9Y5T5 823 aa18.92■□□□□ 0.62
NXF1-214ENST00000533048 PTPRCP08575 1304 aa18.92■□□□□ 0.62
NXF1-214ENST00000533048 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
NXF1-214ENST00000533048 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms