RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
VPS26B-207ENST00000532160 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
VPS26B-207ENST00000532160 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
VPS26B-207ENST00000532160 SIK1P57059 783 aa12.78□□□□□ -0.36
VPS26B-207ENST00000532160 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
VPS26B-207ENST00000532160 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
VPS26B-207ENST00000532160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
VPS26B-207ENST00000532160 GRIN3BO60391 1043 aa12.77□□□□□ -0.37
VPS26B-207ENST00000532160 PHKG2P15735 406 aa12.77□□□□□ -0.37
VPS26B-207ENST00000532160 ITPK1Q13572 414 aa12.77□□□□□ -0.37
VPS26B-207ENST00000532160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS26B-207ENST00000532160 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
VPS26B-207ENST00000532160 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
VPS26B-207ENST00000532160 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
VPS26B-207ENST00000532160 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
VPS26B-207ENST00000532160 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
VPS26B-207ENST00000532160 SSFA2P28290 1259 aa12.75□□□□□ -0.37
VPS26B-207ENST00000532160 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
VPS26B-207ENST00000532160 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
VPS26B-207ENST00000532160 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
VPS26B-207ENST00000532160 WWC3Q9ULE0 1092 aa12.75□□□□□ -0.37
VPS26B-207ENST00000532160 KNSTRNQ9Y448 316 aa12.75□□□□□ -0.37
VPS26B-207ENST00000532160 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
VPS26B-207ENST00000532160 IGSF1Q8N6C5 1336 aa12.74□□□□□ -0.37
VPS26B-207ENST00000532160 GNPATO15228 680 aa12.74□□□□□ -0.37
VPS26B-207ENST00000532160 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
VPS26B-207ENST00000532160 KDRP35968 1356 aa12.73□□□□□ -0.37
VPS26B-207ENST00000532160 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
VPS26B-207ENST00000532160 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
VPS26B-207ENST00000532160 ADCY9O60503 1353 aa12.72□□□□□ -0.37
VPS26B-207ENST00000532160 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
VPS26B-207ENST00000532160 SLC4A9Q96Q91 983 aa12.72□□□□□ -0.37
VPS26B-207ENST00000532160 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
VPS26B-207ENST00000532160 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.37
VPS26B-207ENST00000532160 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.37
VPS26B-207ENST00000532160 MYH14Q7Z406 1995 aaKnown RBP12.71□□□□□ -0.37
VPS26B-207ENST00000532160 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.37
VPS26B-207ENST00000532160 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.38
VPS26B-207ENST00000532160 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
VPS26B-207ENST00000532160 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
VPS26B-207ENST00000532160 MMP10P09238 476 aa12.7□□□□□ -0.38
VPS26B-207ENST00000532160 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
VPS26B-207ENST00000532160 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
VPS26B-207ENST00000532160 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
VPS26B-207ENST00000532160 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
VPS26B-207ENST00000532160 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
VPS26B-207ENST00000532160 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
VPS26B-207ENST00000532160 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
VPS26B-207ENST00000532160 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
VPS26B-207ENST00000532160 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
VPS26B-207ENST00000532160 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
VPS26B-207ENST00000532160 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
VPS26B-207ENST00000532160 RTCBQ9Y3I0 505 aaKnown RBP12.68□□□□□ -0.38
VPS26B-207ENST00000532160 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
VPS26B-207ENST00000532160 TRAPPC3LQ5T215 181 aa12.67□□□□□ -0.38
VPS26B-207ENST00000532160 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
VPS26B-207ENST00000532160 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
VPS26B-207ENST00000532160 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
VPS26B-207ENST00000532160 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
VPS26B-207ENST00000532160 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
VPS26B-207ENST00000532160 TJP1Q07157 1748 aa12.65□□□□□ -0.38
VPS26B-207ENST00000532160 GYS1P13807 737 aa12.65□□□□□ -0.38
VPS26B-207ENST00000532160 CABP4P57796 275 aa12.65□□□□□ -0.38
VPS26B-207ENST00000532160 AMOTQ4VCS5 1084 aa12.65□□□□□ -0.38
VPS26B-207ENST00000532160 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
VPS26B-207ENST00000532160 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
VPS26B-207ENST00000532160 SCN11AQ9UI33 1791 aa12.65□□□□□ -0.38
VPS26B-207ENST00000532160 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
VPS26B-207ENST00000532160 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
VPS26B-207ENST00000532160 MTHFSP49914 203 aa12.64□□□□□ -0.39
VPS26B-207ENST00000532160 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
VPS26B-207ENST00000532160 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
VPS26B-207ENST00000532160 RPS6KA4O75676 772 aa12.63□□□□□ -0.39
VPS26B-207ENST00000532160 IL13P35225 146 aa12.63□□□□□ -0.39
VPS26B-207ENST00000532160 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
VPS26B-207ENST00000532160 C1orf141Q5JVX7 400 aa12.63□□□□□ -0.39
VPS26B-207ENST00000532160 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
VPS26B-207ENST00000532160 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
VPS26B-207ENST00000532160 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
VPS26B-207ENST00000532160 RFC4P35249 363 aa12.62□□□□□ -0.39
VPS26B-207ENST00000532160 CRKLP46109 303 aaKnown RBP12.62□□□□□ -0.39
VPS26B-207ENST00000532160 TGFB2P61812 414 aa12.62□□□□□ -0.39
VPS26B-207ENST00000532160 SRP68Q9UHB9 627 aaKnown RBP12.62□□□□□ -0.39
VPS26B-207ENST00000532160 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
VPS26B-207ENST00000532160 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
VPS26B-207ENST00000532160 ZBTB22O15209 634 aa12.61□□□□□ -0.39
VPS26B-207ENST00000532160 DPEP1P16444 411 aa12.61□□□□□ -0.39
VPS26B-207ENST00000532160 CCDC87Q9NVE4 849 aa12.61□□□□□ -0.39
VPS26B-207ENST00000532160 KIF3CO14782 793 aa12.6□□□□□ -0.39
VPS26B-207ENST00000532160 PARP3Q9Y6F1 533 aa12.6□□□□□ -0.39
VPS26B-207ENST00000532160 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
VPS26B-207ENST00000532160 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
VPS26B-207ENST00000532160 HSPA6P17066 643 aa12.59□□□□□ -0.39
VPS26B-207ENST00000532160 KCNA3P22001 575 aa12.59□□□□□ -0.39
VPS26B-207ENST00000532160 PPP2R1AP30153 589 aa12.59□□□□□ -0.39
VPS26B-207ENST00000532160 DDR1Q08345 913 aa12.59□□□□□ -0.39
VPS26B-207ENST00000532160 FKBP8Q14318 412 aa12.59□□□□□ -0.39
VPS26B-207ENST00000532160 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
VPS26B-207ENST00000532160 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
VPS26B-207ENST00000532160 MRC1P22897 1456 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms