RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
NXF1-211ENST00000531709 FERMT3Q86UX7 667 aa13.64□□□□□ -0.23
NXF1-211ENST00000531709 CCDC83Q8IWF9 413 aa13.64□□□□□ -0.23
NXF1-211ENST00000531709 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
NXF1-211ENST00000531709 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
NXF1-211ENST00000531709 FOSBP53539 338 aa13.64□□□□□ -0.23
NXF1-211ENST00000531709 SIL1Q9H173 461 aa13.64□□□□□ -0.23
NXF1-211ENST00000531709 PALD1Q9ULE6 856 aa13.64□□□□□ -0.23
NXF1-211ENST00000531709 RTL1A6NKG5 1358 aa13.64□□□□□ -0.23
NXF1-211ENST00000531709 GPT2Q8TD30 523 aa13.63□□□□□ -0.23
NXF1-211ENST00000531709 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
NXF1-211ENST00000531709 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
NXF1-211ENST00000531709 CHMLP26374 656 aa13.63□□□□□ -0.23
NXF1-211ENST00000531709 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
NXF1-211ENST00000531709 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 STK3Q13188 491 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 G3BP1Q13283 466 aaKnown RBP eCLIP13.62□□□□□ -0.23
NXF1-211ENST00000531709 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 EYA1Q99502 592 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
NXF1-211ENST00000531709 ABCC3O15438 1527 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 CPA1P15085 419 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 ZNF445P59923 1031 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
NXF1-211ENST00000531709 MAP3K19Q56UN5 1328 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
NXF1-211ENST00000531709 PHAXQ9H814 394 aaKnown RBP13.62□□□□□ -0.23
NXF1-211ENST00000531709 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
NXF1-211ENST00000531709 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 CNPY2Q9Y2B0 182 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
NXF1-211ENST00000531709 SETBP1Q9Y6X0 1596 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 PI4KAP2A4QPH2 592 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 AMOTL2Q9Y2J4 779 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 ARAP3Q8WWN8 1544 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
NXF1-211ENST00000531709 OFD1O75665 1012 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 PSME1Q06323 249 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
NXF1-211ENST00000531709 BICD2Q8TD16 824 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 ZMYND15Q9H091 742 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 PDRG1Q9NUG6 133 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 NRXN1Q9ULB1 1477 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 KIAA1210Q9ULL0 1709 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 GOLGA6L6A8MZA4 724 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 H3BQV1 296 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 CAMK4Q16566 473 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 RHPN1Q8TCX5 695 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 ZKSCAN5Q9Y2L8 839 aa13.6□□□□□ -0.23
NXF1-211ENST00000531709 DDIT3P35638 169 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 AACSQ86V21 672 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
NXF1-211ENST00000531709 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
NXF1-211ENST00000531709 MROH2AA6NES4 1674 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 GIMAP6Q6P9H5 292 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 UNC5CLQ8IV45 518 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 PKNOX2Q96KN3 472 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 PPP1R9BQ96SB3 815 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
NXF1-211ENST00000531709 CEBPZQ03701 1054 aaKnown RBP13.58□□□□□ -0.23
NXF1-211ENST00000531709 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.23
NXF1-211ENST00000531709 PDCL3Q9H2J4 239 aa13.58□□□□□ -0.23
NXF1-211ENST00000531709 METP08581 1390 aa13.58□□□□□ -0.24
NXF1-211ENST00000531709 STX6O43752 255 aa13.58□□□□□ -0.24
NXF1-211ENST00000531709 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
NXF1-211ENST00000531709 MPRIPQ6WCQ1 1025 aa13.58□□□□□ -0.24
NXF1-211ENST00000531709 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
NXF1-211ENST00000531709 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
NXF1-211ENST00000531709 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.24
NXF1-211ENST00000531709 FAM184AQ8NB25 1140 aa13.58□□□□□ -0.24
NXF1-211ENST00000531709 HDAC5Q9UQL6 1122 aa13.58□□□□□ -0.24
NXF1-211ENST00000531709 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
NXF1-211ENST00000531709 ADCY5O95622 1261 aa13.57□□□□□ -0.24
NXF1-211ENST00000531709 RIC3Q7Z5B4 369 aa13.57□□□□□ -0.24
NXF1-211ENST00000531709 NECAB1Q8N987 351 aa13.57□□□□□ -0.24
NXF1-211ENST00000531709 ZNF592Q92610 1267 aa13.57□□□□□ -0.24
NXF1-211ENST00000531709 CCDC8Q9H0W5 538 aaPredicted RBP13.57□□□□□ -0.24
NXF1-211ENST00000531709 NOL7Q9UMY1 257 aaKnown RBP13.57□□□□□ -0.24
NXF1-211ENST00000531709 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
NXF1-211ENST00000531709 CCDC183Q5T5S1 534 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 CHPF2Q9P2E5 772 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 GJB2P29033 226 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 AK2P54819 239 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 RNF20Q5VTR2 975 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 RAB11FIP3O75154 756 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 ANAPC15P60006 121 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
NXF1-211ENST00000531709 GLRX3O76003 335 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms