RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 IFT57Q9NWB7 429 aa22.98■■□□□ 1.27
CTSB-222ENST00000531551 IL16Q14005 1332 aa22.97■■□□□ 1.27
CTSB-222ENST00000531551 PIGBQ92521 554 aa22.97■■□□□ 1.27
CTSB-222ENST00000531551 TSR2Q969E8 191 aaKnown RBP22.97■■□□□ 1.27
CTSB-222ENST00000531551 E9PSI1 815 aa22.96■■□□□ 1.27
CTSB-222ENST00000531551 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
CTSB-222ENST00000531551 SLC39A6Q13433 755 aa22.96■■□□□ 1.27
CTSB-222ENST00000531551 MYH16Q9H6N6 1097 aa22.96■■□□□ 1.27
CTSB-222ENST00000531551 ADAMTS7Q9UKP4 1686 aa22.95■■□□□ 1.26
CTSB-222ENST00000531551 SLFN5Q08AF3 891 aa22.95■■□□□ 1.26
CTSB-222ENST00000531551 MBIPQ9NS73 344 aa22.95■■□□□ 1.26
CTSB-222ENST00000531551 TOGARAM1Q9Y4F4 1720 aa22.95■■□□□ 1.26
CTSB-222ENST00000531551 CHL1O00533 1208 aa22.94■■□□□ 1.26
CTSB-222ENST00000531551 ZNF853P0CG23 659 aa22.94■■□□□ 1.26
CTSB-222ENST00000531551 DOT1LQ8TEK3 1739 aa22.94■■□□□ 1.26
CTSB-222ENST00000531551 PTF1AQ7RTS3 328 aa22.94■■□□□ 1.26
CTSB-222ENST00000531551 EP400Q96L91 3159 aa22.94■■□□□ 1.26
CTSB-222ENST00000531551 BCL9O00512 1426 aa22.93■■□□□ 1.26
CTSB-222ENST00000531551 MRC1P22897 1456 aa22.93■■□□□ 1.26
CTSB-222ENST00000531551 TRIM37O94972 964 aa22.93■■□□□ 1.26
CTSB-222ENST00000531551 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
CTSB-222ENST00000531551 KCNQ3O43525 872 aa22.92■■□□□ 1.26
CTSB-222ENST00000531551 FANCIQ9NVI1 1328 aa22.92■■□□□ 1.26
CTSB-222ENST00000531551 KAT6BQ8WYB5 2073 aa22.91■■□□□ 1.26
CTSB-222ENST00000531551 ZNF790Q6PG37 636 aa22.91■■□□□ 1.26
CTSB-222ENST00000531551 BABAM1Q9NWV8 329 aa22.91■■□□□ 1.26
CTSB-222ENST00000531551 ASAP1Q9ULH1 1129 aa22.91■■□□□ 1.26
CTSB-222ENST00000531551 VIRMAQ69YN4 1812 aaKnown RBP22.9■■□□□ 1.26
CTSB-222ENST00000531551 DUSP27Q5VZP5 1158 aa22.89■■□□□ 1.25
CTSB-222ENST00000531551 BCL11BQ9C0K0 894 aaPredicted RBP22.89■■□□□ 1.25
CTSB-222ENST00000531551 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
CTSB-222ENST00000531551 PTCD1O75127 700 aaKnown RBP22.88■■□□□ 1.25
CTSB-222ENST00000531551 EXOSC9Q06265 439 aaKnown RBP22.87■■□□□ 1.25
CTSB-222ENST00000531551 TRMT2AQ8IZ69 625 aaKnown RBP22.87■■□□□ 1.25
CTSB-222ENST00000531551 ELL2O00472 640 aaPredicted RBP22.86■■□□□ 1.25
CTSB-222ENST00000531551 KRT24Q2M2I5 525 aa22.86■■□□□ 1.25
CTSB-222ENST00000531551 RBM42Q9BTD8 480 aaKnown RBP22.86■■□□□ 1.25
CTSB-222ENST00000531551 ITGB4P16144 1822 aa22.86■■□□□ 1.25
CTSB-222ENST00000531551 EIF4A1P60842 406 aaKnown RBP22.85■■□□□ 1.25
CTSB-222ENST00000531551 ZNF496Q96IT1 587 aaPredicted RBP22.85■■□□□ 1.25
CTSB-222ENST00000531551 SIPA1L3O60292 1781 aaPredicted RBP22.84■■□□□ 1.25
CTSB-222ENST00000531551 FMNL2Q96PY5 1086 aa22.84■■□□□ 1.25
CTSB-222ENST00000531551 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
CTSB-222ENST00000531551 C8orf58Q8NAV2 365 aa22.83■■□□□ 1.25
CTSB-222ENST00000531551 SMARCC1Q92922 1105 aaPredicted RBP22.83■■□□□ 1.25
CTSB-222ENST00000531551 PALLDQ8WX93 1383 aa22.83■■□□□ 1.24
CTSB-222ENST00000531551 APBA3O96018 575 aa22.81■■□□□ 1.24
CTSB-222ENST00000531551 TSPYL6Q8N831 410 aa22.81■■□□□ 1.24
CTSB-222ENST00000531551 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
CTSB-222ENST00000531551 SBF2Q86WG5 1849 aa22.8■■□□□ 1.24
CTSB-222ENST00000531551 KDM3BQ7LBC6 1761 aa22.79■■□□□ 1.24
CTSB-222ENST00000531551 PRAMEF22A3QJZ6 481 aa22.79■■□□□ 1.24
CTSB-222ENST00000531551 HEG1Q9ULI3 1381 aa22.78■■□□□ 1.24
CTSB-222ENST00000531551 GIGYF1O75420 1035 aaPredicted RBP22.78■■□□□ 1.24
CTSB-222ENST00000531551 SNRPA1P09661 255 aaKnown RBP22.78■■□□□ 1.24
CTSB-222ENST00000531551 SF3B2Q13435 895 aaKnown RBP22.78■■□□□ 1.24
CTSB-222ENST00000531551 LOC102724428A0A0B4J2F2 783 aa22.77■■□□□ 1.24
CTSB-222ENST00000531551 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
CTSB-222ENST00000531551 SIK1P57059 783 aa22.77■■□□□ 1.24
CTSB-222ENST00000531551 NECTIN2Q92692 538 aa22.77■■□□□ 1.24
CTSB-222ENST00000531551 BTAF1O14981 1849 aa22.77■■□□□ 1.24
CTSB-222ENST00000531551 KCPQ6ZWJ8 1503 aa22.77■■□□□ 1.24
CTSB-222ENST00000531551 EIF2S2P20042 333 aaKnown RBP22.77■■□□□ 1.24
CTSB-222ENST00000531551 PAPPAQ13219 1627 aa22.76■■□□□ 1.23
CTSB-222ENST00000531551 KCNQ4P56696 695 aa22.76■■□□□ 1.23
CTSB-222ENST00000531551 SLC4A9Q96Q91 983 aa22.76■■□□□ 1.23
CTSB-222ENST00000531551 VAMP4O75379 141 aa22.75■■□□□ 1.23
CTSB-222ENST00000531551 ILDR2Q71H61 639 aa22.74■■□□□ 1.23
CTSB-222ENST00000531551 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
CTSB-222ENST00000531551 VSIG10Q8N0Z9 540 aa22.74■■□□□ 1.23
CTSB-222ENST00000531551 CCNL1Q9UK58 526 aaPredicted RBP22.74■■□□□ 1.23
CTSB-222ENST00000531551 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
CTSB-222ENST00000531551 TCERG1O14776 1098 aaKnown RBP22.73■■□□□ 1.23
CTSB-222ENST00000531551 CENPBP07199 599 aaPredicted RBP22.73■■□□□ 1.23
CTSB-222ENST00000531551 HDGFL1Q5TGJ6 251 aa22.73■■□□□ 1.23
CTSB-222ENST00000531551 HOXB7P09629 217 aa22.71■■□□□ 1.23
CTSB-222ENST00000531551 PLSCR1O15162 318 aa22.71■■□□□ 1.23
CTSB-222ENST00000531551 CT47B1P0C2W7 299 aaPredicted RBP22.71■■□□□ 1.23
CTSB-222ENST00000531551 ITPK1Q13572 414 aa22.71■■□□□ 1.23
CTSB-222ENST00000531551 TEX13AQ9BXU3 409 aaPredicted RBP22.71■■□□□ 1.23
CTSB-222ENST00000531551 UBR2Q8IWV8 1755 aa22.7■■□□□ 1.22
CTSB-222ENST00000531551 EN1Q05925 392 aaPredicted RBP22.7■■□□□ 1.22
CTSB-222ENST00000531551 SOS1Q07889 1333 aaPredicted RBP22.69■■□□□ 1.22
CTSB-222ENST00000531551 STARD3NLO95772 234 aa22.69■■□□□ 1.22
CTSB-222ENST00000531551 BAG6P46379 1132 aa22.69■■□□□ 1.22
CTSB-222ENST00000531551 TXNRD1Q16881 649 aa22.69■■□□□ 1.22
CTSB-222ENST00000531551 BCL2L13Q9BXK5 485 aa22.69■■□□□ 1.22
CTSB-222ENST00000531551 CCDC30Q5VVM6 783 aa22.68■■□□□ 1.22
CTSB-222ENST00000531551 DEFB132Q7Z7B7 95 aa22.68■■□□□ 1.22
CTSB-222ENST00000531551 RCAN3Q9UKA8 241 aa22.68■■□□□ 1.22
CTSB-222ENST00000531551 PIP4K2AP48426 406 aaPredicted RBP22.67■■□□□ 1.22
CTSB-222ENST00000531551 CCDC125Q86Z20 511 aa22.67■■□□□ 1.22
CTSB-222ENST00000531551 LRRC4BQ9NT99 713 aa22.67■■□□□ 1.22
CTSB-222ENST00000531551 A1BGP04217 495 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 EZH2Q15910 746 aaKnown RBP22.66■■□□□ 1.22
CTSB-222ENST00000531551 SLC27A3Q5K4L6 730 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 PROM2Q8N271 834 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 STK31Q9BXU1 1019 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 CHMP4AQ9BY43 222 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 TNS1Q9HBL0 1735 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms