RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 TEFQ10587 303 aa19.49■□□□□ 0.71
SRPRA-204ENST00000530680 NKX1-1Q15270 411 aaPredicted RBP19.49■□□□□ 0.71
SRPRA-204ENST00000530680 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
SRPRA-204ENST00000530680 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
SRPRA-204ENST00000530680 ADAMTS7Q9UKP4 1686 aa19.48■□□□□ 0.71
SRPRA-204ENST00000530680 APAF1O14727 1248 aa19.47■□□□□ 0.71
SRPRA-204ENST00000530680 BCL11BQ9C0K0 894 aaPredicted RBP19.47■□□□□ 0.71
SRPRA-204ENST00000530680 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
SRPRA-204ENST00000530680 ERVV-2B6SEH9 535 aa19.46■□□□□ 0.71
SRPRA-204ENST00000530680 RNMTO43148 476 aaKnown RBP19.46■□□□□ 0.71
SRPRA-204ENST00000530680 HTATSF1O43719 755 aaKnown RBP19.46■□□□□ 0.71
SRPRA-204ENST00000530680 MCM10Q7L590 875 aa19.45■□□□□ 0.7
SRPRA-204ENST00000530680 MRC1P22897 1456 aa19.45■□□□□ 0.7
SRPRA-204ENST00000530680 SIPA1L3O60292 1781 aaPredicted RBP19.44■□□□□ 0.7
SRPRA-204ENST00000530680 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
SRPRA-204ENST00000530680 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
SRPRA-204ENST00000530680 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
SRPRA-204ENST00000530680 PTF1AQ7RTS3 328 aa19.42■□□□□ 0.7
SRPRA-204ENST00000530680 SLC52A2Q9HAB3 445 aa19.42■□□□□ 0.7
SRPRA-204ENST00000530680 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
SRPRA-204ENST00000530680 SALL2Q9Y467 1007 aaPredicted RBP19.41■□□□□ 0.7
SRPRA-204ENST00000530680 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
SRPRA-204ENST00000530680 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
SRPRA-204ENST00000530680 TTC5Q8N0Z6 440 aa19.4■□□□□ 0.7
SRPRA-204ENST00000530680 IL17REQ8NFR9 667 aa19.4■□□□□ 0.7
SRPRA-204ENST00000530680 PIGBQ92521 554 aa19.4■□□□□ 0.7
SRPRA-204ENST00000530680 SMARCC1Q92922 1105 aaPredicted RBP19.4■□□□□ 0.7
SRPRA-204ENST00000530680 PDGFDQ9GZP0 370 aaPredicted RBP19.4■□□□□ 0.7
SRPRA-204ENST00000530680 CEMIPQ8WUJ3 1361 aa19.4■□□□□ 0.7
SRPRA-204ENST00000530680 PAPPAQ13219 1627 aa19.4■□□□□ 0.7
SRPRA-204ENST00000530680 PROM2Q8N271 834 aa19.39■□□□□ 0.69
SRPRA-204ENST00000530680 LY75O60449 1722 aa19.39■□□□□ 0.69
SRPRA-204ENST00000530680 UTRNP46939 3433 aa19.38■□□□□ 0.69
SRPRA-204ENST00000530680 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
SRPRA-204ENST00000530680 THUMPD2Q9BTF0 503 aaKnown RBP19.38■□□□□ 0.69
SRPRA-204ENST00000530680 STK32BQ9NY57 414 aa19.38■□□□□ 0.69
SRPRA-204ENST00000530680 BTBD11A6QL63 1104 aa19.37■□□□□ 0.69
SRPRA-204ENST00000530680 PTGER2P43116 358 aa19.37■□□□□ 0.69
SRPRA-204ENST00000530680 NGEFQ8N5V2 710 aa19.37■□□□□ 0.69
SRPRA-204ENST00000530680 LAS1LQ9Y4W2 734 aaKnown RBP19.37■□□□□ 0.69
SRPRA-204ENST00000530680 CHD4Q14839 1912 aa19.37■□□□□ 0.69
SRPRA-204ENST00000530680 TXNRD1Q16881 649 aa19.36■□□□□ 0.69
SRPRA-204ENST00000530680 KDM3BQ7LBC6 1761 aa19.36■□□□□ 0.69
SRPRA-204ENST00000530680 UBR2Q8IWV8 1755 aa19.35■□□□□ 0.69
SRPRA-204ENST00000530680 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
SRPRA-204ENST00000530680 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
SRPRA-204ENST00000530680 ATF5Q9Y2D1 282 aaPredicted RBP19.35■□□□□ 0.69
SRPRA-204ENST00000530680 TAF7Q15545 349 aaPredicted RBP19.34■□□□□ 0.69
SRPRA-204ENST00000530680 SLC15A2Q16348 729 aa19.34■□□□□ 0.69
SRPRA-204ENST00000530680 ASAP1Q9ULH1 1129 aa19.34■□□□□ 0.69
SRPRA-204ENST00000530680 C5P01031 1676 aa19.33■□□□□ 0.69
SRPRA-204ENST00000530680 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
SRPRA-204ENST00000530680 TSPYL4Q9UJ04 414 aa19.33■□□□□ 0.68
SRPRA-204ENST00000530680 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
SRPRA-204ENST00000530680 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
SRPRA-204ENST00000530680 SLC39A6Q13433 755 aa19.32■□□□□ 0.68
SRPRA-204ENST00000530680 ZNF784Q8NCA9 323 aaPredicted RBP19.32■□□□□ 0.68
SRPRA-204ENST00000530680 FHDC1Q9C0D6 1143 aaPredicted RBP19.32■□□□□ 0.68
SRPRA-204ENST00000530680 MTFR1LQ9H019 292 aa19.32■□□□□ 0.68
SRPRA-204ENST00000530680 ATG3Q9NT62 314 aa19.32■□□□□ 0.68
SRPRA-204ENST00000530680 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
SRPRA-204ENST00000530680 WWC1Q8IX03 1113 aa19.31■□□□□ 0.68
SRPRA-204ENST00000530680 SYT17Q9BSW7 474 aa19.31■□□□□ 0.68
SRPRA-204ENST00000530680 TAF1LQ8IZX4 1826 aa19.3■□□□□ 0.68
SRPRA-204ENST00000530680 HMGB2P26583 209 aaKnown RBP19.3■□□□□ 0.68
SRPRA-204ENST00000530680 GNAI1P63096 354 aa19.3■□□□□ 0.68
SRPRA-204ENST00000530680 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
SRPRA-204ENST00000530680 SLC27A3Q5K4L6 730 aa19.3■□□□□ 0.68
SRPRA-204ENST00000530680 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
SRPRA-204ENST00000530680 LOC102724428A0A0B4J2F2 783 aa19.29■□□□□ 0.68
SRPRA-204ENST00000530680 ATP6V1AP38606 617 aa19.29■□□□□ 0.68
SRPRA-204ENST00000530680 SIK1P57059 783 aa19.29■□□□□ 0.68
SRPRA-204ENST00000530680 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
SRPRA-204ENST00000530680 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
SRPRA-204ENST00000530680 ZNF831Q5JPB2 1677 aa19.29■□□□□ 0.68
SRPRA-204ENST00000530680 KCPQ6ZWJ8 1503 aa19.29■□□□□ 0.68
SRPRA-204ENST00000530680 SGIP1Q9BQI5 828 aa19.28■□□□□ 0.68
SRPRA-204ENST00000530680 IFT57Q9NWB7 429 aa19.28■□□□□ 0.68
SRPRA-204ENST00000530680 LAMB4A4D0S4 1761 aa19.28■□□□□ 0.68
SRPRA-204ENST00000530680 TJP1Q07157 1748 aa19.28■□□□□ 0.68
SRPRA-204ENST00000530680 BABAM1Q9NWV8 329 aa19.27■□□□□ 0.68
SRPRA-204ENST00000530680 COL5A3P25940 1745 aaPredicted RBP19.26■□□□□ 0.67
SRPRA-204ENST00000530680 WDR63Q8IWG1 891 aa19.26■□□□□ 0.67
SRPRA-204ENST00000530680 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
SRPRA-204ENST00000530680 CICQ96RK0 1608 aaPredicted RBP19.25■□□□□ 0.67
SRPRA-204ENST00000530680 C4BP0C0L5 1744 aa19.25■□□□□ 0.67
SRPRA-204ENST00000530680 IL16Q14005 1332 aa19.25■□□□□ 0.67
SRPRA-204ENST00000530680 HEG1Q9ULI3 1381 aa19.24■□□□□ 0.67
SRPRA-204ENST00000530680 KCNQ4P56696 695 aa19.24■□□□□ 0.67
SRPRA-204ENST00000530680 ARXQ96QS3 562 aa19.24■□□□□ 0.67
SRPRA-204ENST00000530680 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
SRPRA-204ENST00000530680 KCNQ3O43525 872 aa19.23■□□□□ 0.67
SRPRA-204ENST00000530680 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
SRPRA-204ENST00000530680 CHL1O00533 1208 aa19.22■□□□□ 0.67
SRPRA-204ENST00000530680 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
SRPRA-204ENST00000530680 VSIG10Q8N0Z9 540 aa19.22■□□□□ 0.67
SRPRA-204ENST00000530680 AK7Q96M32 723 aa19.22■□□□□ 0.67
SRPRA-204ENST00000530680 MBIPQ9NS73 344 aa19.22■□□□□ 0.67
SRPRA-204ENST00000530680 QSER1Q2KHR3 1735 aa19.22■□□□□ 0.67
SRPRA-204ENST00000530680 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms