RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SPRYD3Q8NCJ5 442 aa14.32□□□□□ -0.12
USP35-207ENST00000530546 PDCL3Q9H2J4 239 aa14.32□□□□□ -0.12
USP35-207ENST00000530546 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
USP35-207ENST00000530546 NFAT5O94916 1531 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 MRE11P49959 708 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 MPRIPQ6WCQ1 1025 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 ANKRD24Q8TF21 1146 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 C19orf44Q9H6X5 657 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
USP35-207ENST00000530546 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 DCTPP1Q9H773 170 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 LTN1O94822 1766 aa14.31□□□□□ -0.12
USP35-207ENST00000530546 ATF3P18847 181 aa14.3□□□□□ -0.12
USP35-207ENST00000530546 HSPA2P54652 639 aa14.3□□□□□ -0.12
USP35-207ENST00000530546 HDGFL1Q5TGJ6 251 aa14.3□□□□□ -0.12
USP35-207ENST00000530546 RPAP2Q8IXW5 612 aaPredicted RBP14.3□□□□□ -0.12
USP35-207ENST00000530546 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
USP35-207ENST00000530546 KCNQ3O43525 872 aa14.3□□□□□ -0.12
USP35-207ENST00000530546 CCT4P50991 539 aaKnown RBP14.3□□□□□ -0.12
USP35-207ENST00000530546 BMP2KLQ5H9B9 411 aa14.3□□□□□ -0.12
USP35-207ENST00000530546 TEFQ10587 303 aa14.29□□□□□ -0.12
USP35-207ENST00000530546 TBC1D2Q9BYX2 928 aa14.29□□□□□ -0.12
USP35-207ENST00000530546 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
USP35-207ENST00000530546 PLEKHO1Q53GL0 409 aaPredicted RBP14.29□□□□□ -0.12
USP35-207ENST00000530546 OTUD7AQ8TE49 926 aaPredicted RBP14.29□□□□□ -0.12
USP35-207ENST00000530546 ESPNB1AK53 854 aa14.28□□□□□ -0.12
USP35-207ENST00000530546 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
USP35-207ENST00000530546 C1orf167Q5SNV9 1468 aa14.28□□□□□ -0.12
USP35-207ENST00000530546 USP54Q70EL1 1684 aa14.27□□□□□ -0.12
USP35-207ENST00000530546 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.12
USP35-207ENST00000530546 PLEKHM2Q8IWE5 1019 aa14.27□□□□□ -0.12
USP35-207ENST00000530546 TMEM94Q12767 1356 aa14.27□□□□□ -0.12
USP35-207ENST00000530546 PANK2Q9BZ23 570 aa14.27□□□□□ -0.13
USP35-207ENST00000530546 BTBD11A6QL63 1104 aa14.26□□□□□ -0.13
USP35-207ENST00000530546 ANXA1P04083 346 aa14.26□□□□□ -0.13
USP35-207ENST00000530546 TBC1D9Q6ZT07 1266 aa14.26□□□□□ -0.13
USP35-207ENST00000530546 CABLES1Q8TDN4 633 aa14.26□□□□□ -0.13
USP35-207ENST00000530546 GNAI2P04899 355 aa14.26□□□□□ -0.13
USP35-207ENST00000530546 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
USP35-207ENST00000530546 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
USP35-207ENST00000530546 MCM4P33991 863 aa14.25□□□□□ -0.13
USP35-207ENST00000530546 HMMRO75330 724 aa14.25□□□□□ -0.13
USP35-207ENST00000530546 EIF4A1P60842 406 aaKnown RBP14.25□□□□□ -0.13
USP35-207ENST00000530546 EXOC6BQ9Y2D4 811 aa14.25□□□□□ -0.13
USP35-207ENST00000530546 BABAM1Q9NWV8 329 aa14.25□□□□□ -0.13
USP35-207ENST00000530546 CEMIPQ8WUJ3 1361 aa14.24□□□□□ -0.13
USP35-207ENST00000530546 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
USP35-207ENST00000530546 RGPD2P0DJD1 1756 aa14.24□□□□□ -0.13
USP35-207ENST00000530546 LRRC37A3O60309 1634 aa14.24□□□□□ -0.13
USP35-207ENST00000530546 CHPF2Q9P2E5 772 aa14.24□□□□□ -0.13
USP35-207ENST00000530546 RNMTO43148 476 aaKnown RBP14.23□□□□□ -0.13
USP35-207ENST00000530546 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
USP35-207ENST00000530546 LRRFIP2Q9Y608 721 aaKnown RBP14.23□□□□□ -0.13
USP35-207ENST00000530546 CDC45O75419 566 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 CHRNA2Q15822 529 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 TTC22Q5TAA0 569 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 PXDNQ92626 1479 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 GNAI3P08754 354 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 GRPEL1Q9HAV7 217 aa14.22□□□□□ -0.13
USP35-207ENST00000530546 SLIT3O75094 1523 aa14.21□□□□□ -0.14
USP35-207ENST00000530546 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.14
USP35-207ENST00000530546 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 TRAK2O60296 914 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 UBTFL1P0CB47 393 aaPredicted RBP14.2□□□□□ -0.14
USP35-207ENST00000530546 TSHZ3Q63HK5 1081 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 ARXQ96QS3 562 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 MST1RQ04912 1400 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 ERBB3P21860 1342 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
USP35-207ENST00000530546 RAPGEF4Q8WZA2 1011 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 USP44Q9H0E7 712 aa14.2□□□□□ -0.14
USP35-207ENST00000530546 PI4KAP2A4QPH2 592 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
USP35-207ENST00000530546 PI4KAP1Q8N8J0 262 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 ERBB4Q15303 1308 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 SDSP20132 328 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 AEBP2Q6ZN18 517 aaPredicted RBP14.19□□□□□ -0.14
USP35-207ENST00000530546 DDX11L8A8MPP1 907 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 TERF1P54274 439 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 CADPS2Q86UW7 1296 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 CHMP5Q9NZZ3 219 aa14.19□□□□□ -0.14
USP35-207ENST00000530546 ATP8B2P98198 1209 aa14.18□□□□□ -0.14
USP35-207ENST00000530546 MAP7D2Q96T17 732 aa14.18□□□□□ -0.14
USP35-207ENST00000530546 GZF1Q9H116 711 aaPredicted RBP14.18□□□□□ -0.14
USP35-207ENST00000530546 FAM208AQ9UK61 1670 aaKnown RBP14.18□□□□□ -0.14
USP35-207ENST00000530546 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
USP35-207ENST00000530546 SLC39A6Q13433 755 aa14.17□□□□□ -0.14
USP35-207ENST00000530546 PRDM4Q9UKN5 801 aa14.17□□□□□ -0.14
USP35-207ENST00000530546 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
USP35-207ENST00000530546 PROSER3Q2NL68 480 aa14.17□□□□□ -0.14
USP35-207ENST00000530546 DNAAF4Q8WXU2 420 aa14.17□□□□□ -0.14
USP35-207ENST00000530546 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
USP35-207ENST00000530546 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
USP35-207ENST00000530546 TATP17735 454 aaPredicted RBP14.16□□□□□ -0.14
USP35-207ENST00000530546 HOXB7P09629 217 aa14.16□□□□□ -0.14
USP35-207ENST00000530546 NBPF7P0C2Y1 421 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms