RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 USHBP1Q8N6Y0 703 aa10.35□□□□□ -0.75
SORL1-207ENST00000528339 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
SORL1-207ENST00000528339 PRDM11Q9NQV5 511 aa10.35□□□□□ -0.75
SORL1-207ENST00000528339 PDIA6Q15084 440 aa10.35□□□□□ -0.75
SORL1-207ENST00000528339 HNRNPUQ00839 825 aaKnown RBP eCLIP10.35□□□□□ -0.75
SORL1-207ENST00000528339 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
SORL1-207ENST00000528339 ABCC4O15439 1325 aa10.35□□□□□ -0.75
SORL1-207ENST00000528339 EIF4A1P60842 406 aaKnown RBP10.34□□□□□ -0.75
SORL1-207ENST00000528339 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
SORL1-207ENST00000528339 MARCH10Q8NA82 808 aaPredicted RBP10.34□□□□□ -0.75
SORL1-207ENST00000528339 RARSP54136 660 aaKnown RBP10.34□□□□□ -0.75
SORL1-207ENST00000528339 COL11A2P13942 1736 aaPredicted RBP10.33□□□□□ -0.76
SORL1-207ENST00000528339 PLEKHO1Q53GL0 409 aaPredicted RBP10.33□□□□□ -0.76
SORL1-207ENST00000528339 AFF2P51816 1311 aa10.33□□□□□ -0.76
SORL1-207ENST00000528339 COL4A1P02462 1669 aa10.33□□□□□ -0.76
SORL1-207ENST00000528339 RGL2O15211 777 aa10.33□□□□□ -0.76
SORL1-207ENST00000528339 GJD4Q96KN9 370 aaPredicted RBP10.32□□□□□ -0.76
SORL1-207ENST00000528339 GNAI1P63096 354 aa10.32□□□□□ -0.76
SORL1-207ENST00000528339 IFNL2Q8IZJ0 200 aa10.32□□□□□ -0.76
SORL1-207ENST00000528339 VSIG10Q8N0Z9 540 aa10.32□□□□□ -0.76
SORL1-207ENST00000528339 ARHGAP45Q92619 1136 aa10.32□□□□□ -0.76
SORL1-207ENST00000528339 RIC1Q4ADV7 1423 aa10.31□□□□□ -0.76
SORL1-207ENST00000528339 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
SORL1-207ENST00000528339 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
SORL1-207ENST00000528339 SLC4A9Q96Q91 983 aa10.31□□□□□ -0.76
SORL1-207ENST00000528339 SPG7Q9UQ90 795 aa10.31□□□□□ -0.76
SORL1-207ENST00000528339 CALD1Q05682 793 aaKnown RBP10.31□□□□□ -0.76
SORL1-207ENST00000528339 U2SURPO15042 1029 aaKnown RBP10.31□□□□□ -0.76
SORL1-207ENST00000528339 PIP4K2BP78356 416 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 C8orf58Q8NAV2 365 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 PSME4Q14997 1843 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 SPEF2Q9C093 1822 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 TATP17735 454 aaPredicted RBP10.3□□□□□ -0.76
SORL1-207ENST00000528339 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
SORL1-207ENST00000528339 ERICH6BQ5W0A0 696 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 MCM10Q7L590 875 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 DOCK2Q92608 1830 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 TSPYL6Q8N831 410 aa10.3□□□□□ -0.76
SORL1-207ENST00000528339 UTYO14607 1347 aa10.29□□□□□ -0.76
SORL1-207ENST00000528339 MAPK8IP3Q9UPT6 1336 aa10.29□□□□□ -0.76
SORL1-207ENST00000528339 HSP90AB1P08238 724 aaKnown RBP10.29□□□□□ -0.76
SORL1-207ENST00000528339 ADCY9O60503 1353 aa10.29□□□□□ -0.76
SORL1-207ENST00000528339 MYH16Q9H6N6 1097 aa10.29□□□□□ -0.76
SORL1-207ENST00000528339 RRP7AQ9Y3A4 280 aaKnown RBP10.29□□□□□ -0.76
SORL1-207ENST00000528339 GIGYF1O75420 1035 aaPredicted RBP10.28□□□□□ -0.76
SORL1-207ENST00000528339 THUMPD2Q9BTF0 503 aaKnown RBP10.28□□□□□ -0.76
SORL1-207ENST00000528339 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
SORL1-207ENST00000528339 TRPC5Q9UL62 973 aaPredicted RBP10.27□□□□□ -0.77
SORL1-207ENST00000528339 RRP1P56182 461 aaKnown RBP10.27□□□□□ -0.77
SORL1-207ENST00000528339 ZNF530Q6P9A1 599 aaPredicted RBP10.27□□□□□ -0.77
SORL1-207ENST00000528339 ATG3Q9NT62 314 aa10.27□□□□□ -0.77
SORL1-207ENST00000528339 USP21Q9UK80 565 aa10.27□□□□□ -0.77
SORL1-207ENST00000528339 KCNQ3O43525 872 aa10.26□□□□□ -0.77
SORL1-207ENST00000528339 ZNF790Q6PG37 636 aa10.26□□□□□ -0.77
SORL1-207ENST00000528339 TSR2Q969E8 191 aaKnown RBP10.26□□□□□ -0.77
SORL1-207ENST00000528339 PPM1GO15355 546 aaPredicted RBP10.25□□□□□ -0.77
SORL1-207ENST00000528339 PIGBQ92521 554 aa10.25□□□□□ -0.77
SORL1-207ENST00000528339 EXOSC9Q06265 439 aaKnown RBP10.25□□□□□ -0.77
SORL1-207ENST00000528339 TOM1L2Q6ZVM7 507 aa10.25□□□□□ -0.77
SORL1-207ENST00000528339 KDM2BQ8NHM5 1336 aa10.25□□□□□ -0.77
SORL1-207ENST00000528339 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
SORL1-207ENST00000528339 RAPGEF4Q8WZA2 1011 aa10.24□□□□□ -0.77
SORL1-207ENST00000528339 NLRP2Q9NX02 1062 aa10.24□□□□□ -0.77
SORL1-207ENST00000528339 RCAN3Q9UKA8 241 aa10.24□□□□□ -0.77
SORL1-207ENST00000528339 PTPRCP08575 1304 aa10.24□□□□□ -0.77
SORL1-207ENST00000528339 SSH1Q8WYL5 1049 aa10.24□□□□□ -0.77
SORL1-207ENST00000528339 INTS3Q68E01 1043 aaKnown RBP10.23□□□□□ -0.77
SORL1-207ENST00000528339 CNTNAP4Q9C0A0 1308 aa10.23□□□□□ -0.77
SORL1-207ENST00000528339 SOX12O15370 315 aa10.23□□□□□ -0.77
SORL1-207ENST00000528339 ZNF772Q68DY9 489 aaPredicted RBP10.23□□□□□ -0.77
SORL1-207ENST00000528339 MPRIPQ6WCQ1 1025 aa10.22□□□□□ -0.77
SORL1-207ENST00000528339 ARFGEF1Q9Y6D6 1849 aa10.22□□□□□ -0.77
SORL1-207ENST00000528339 POTEAQ6S8J7 498 aa10.22□□□□□ -0.77
SORL1-207ENST00000528339 KRT24Q2M2I5 525 aa10.22□□□□□ -0.77
SORL1-207ENST00000528339 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
SORL1-207ENST00000528339 RBM6P78332 1123 aaKnown RBP10.21□□□□□ -0.77
SORL1-207ENST00000528339 NBPF26B4DH59 902 aa10.21□□□□□ -0.77
SORL1-207ENST00000528339 RLBP1P12271 317 aa10.21□□□□□ -0.77
SORL1-207ENST00000528339 AAMPQ13685 434 aa10.21□□□□□ -0.77
SORL1-207ENST00000528339 NBPF14Q5TI25 921 aa10.21□□□□□ -0.77
SORL1-207ENST00000528339 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.77
SORL1-207ENST00000528339 NBPF15Q8N660 670 aa10.21□□□□□ -0.77
SORL1-207ENST00000528339 CASP7P55210 303 aa10.21□□□□□ -0.78
SORL1-207ENST00000528339 INTS5Q6P9B9 1019 aaKnown RBP10.21□□□□□ -0.78
SORL1-207ENST00000528339 C8orf37Q96NL8 207 aa10.21□□□□□ -0.78
SORL1-207ENST00000528339 SNED1Q8TER0 1413 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 AKAP11Q9UKA4 1901 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 BCAR3O75815 825 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 ADAMTS2O95450 1211 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 MAST2Q6P0Q8 1798 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 CYP19A1P11511 503 aaPredicted RBP10.2□□□□□ -0.78
SORL1-207ENST00000528339 TWISTNBQ3B726 338 aaPredicted RBP10.2□□□□□ -0.78
SORL1-207ENST00000528339 NFATC2IPQ8NCF5 419 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 ZBTB22O15209 634 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
SORL1-207ENST00000528339 FOCADQ5VW36 1801 aa10.2□□□□□ -0.78
SORL1-207ENST00000528339 PRAMEF22A3QJZ6 481 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 PTF1AQ7RTS3 328 aa10.19□□□□□ -0.78
SORL1-207ENST00000528339 BCL11BQ9C0K0 894 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms