RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
CHD7-206ENST00000527900 AEBP1Q8IUX7 1158 aa11.64□□□□□ -0.55
CHD7-206ENST00000527900 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
CHD7-206ENST00000527900 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
CHD7-206ENST00000527900 SLC4A9Q96Q91 983 aa11.64□□□□□ -0.55
CHD7-206ENST00000527900 AMOTQ4VCS5 1084 aa11.63□□□□□ -0.55
CHD7-206ENST00000527900 PLEKHO1Q53GL0 409 aaPredicted RBP11.63□□□□□ -0.55
CHD7-206ENST00000527900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.62□□□□□ -0.55
CHD7-206ENST00000527900 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
CHD7-206ENST00000527900 SSFA2P28290 1259 aa11.62□□□□□ -0.55
CHD7-206ENST00000527900 MSL1Q68DK7 614 aa11.62□□□□□ -0.55
CHD7-206ENST00000527900 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
CHD7-206ENST00000527900 AK7Q96M32 723 aa11.62□□□□□ -0.55
CHD7-206ENST00000527900 COL5A3P25940 1745 aaPredicted RBP11.61□□□□□ -0.55
CHD7-206ENST00000527900 ATP6V1AP38606 617 aa11.61□□□□□ -0.55
CHD7-206ENST00000527900 MTHFSP49914 203 aa11.61□□□□□ -0.55
CHD7-206ENST00000527900 ZNF530Q6P9A1 599 aaPredicted RBP11.61□□□□□ -0.55
CHD7-206ENST00000527900 ZNF784Q8NCA9 323 aaPredicted RBP11.61□□□□□ -0.55
CHD7-206ENST00000527900 CD2APQ9Y5K6 639 aa11.61□□□□□ -0.55
CHD7-206ENST00000527900 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
CHD7-206ENST00000527900 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
CHD7-206ENST00000527900 NPC1L1Q9UHC9 1359 aa11.6□□□□□ -0.55
CHD7-206ENST00000527900 GPR162Q16538 588 aa11.6□□□□□ -0.55
CHD7-206ENST00000527900 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHD7-206ENST00000527900 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
CHD7-206ENST00000527900 CICQ96RK0 1608 aaPredicted RBP11.58□□□□□ -0.56
CHD7-206ENST00000527900 PHF14O94880 888 aa11.58□□□□□ -0.56
CHD7-206ENST00000527900 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
CHD7-206ENST00000527900 NFATC2IPQ8NCF5 419 aa11.58□□□□□ -0.56
CHD7-206ENST00000527900 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
CHD7-206ENST00000527900 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
CHD7-206ENST00000527900 GNPATO15228 680 aa11.57□□□□□ -0.56
CHD7-206ENST00000527900 CABP4P57796 275 aa11.57□□□□□ -0.56
CHD7-206ENST00000527900 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
CHD7-206ENST00000527900 C1orf141Q5JVX7 400 aa11.57□□□□□ -0.56
CHD7-206ENST00000527900 CNTNAP4Q9C0A0 1308 aa11.57□□□□□ -0.56
CHD7-206ENST00000527900 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
CHD7-206ENST00000527900 KIF13BQ9NQT8 1826 aa11.56□□□□□ -0.56
CHD7-206ENST00000527900 RPS6KA4O75676 772 aa11.56□□□□□ -0.56
CHD7-206ENST00000527900 CC2D1BQ5T0F9 858 aaKnown RBP11.56□□□□□ -0.56
CHD7-206ENST00000527900 ARHGEF1Q92888 912 aaKnown RBP11.56□□□□□ -0.56
CHD7-206ENST00000527900 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
CHD7-206ENST00000527900 LGR6Q9HBX8 967 aa11.56□□□□□ -0.56
CHD7-206ENST00000527900 TJP1Q07157 1748 aa11.55□□□□□ -0.56
CHD7-206ENST00000527900 GRIN3BO60391 1043 aa11.55□□□□□ -0.56
CHD7-206ENST00000527900 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
CHD7-206ENST00000527900 TRAPPC3LQ5T215 181 aa11.55□□□□□ -0.56
CHD7-206ENST00000527900 RTCBQ9Y3I0 505 aaKnown RBP11.55□□□□□ -0.56
CHD7-206ENST00000527900 MRC1P22897 1456 aa11.55□□□□□ -0.56
CHD7-206ENST00000527900 KIAA1551Q9HCM1 1747 aa11.55□□□□□ -0.56
CHD7-206ENST00000527900 HMOX1P09601 288 aa11.54□□□□□ -0.56
CHD7-206ENST00000527900 MTHFSDQ2M296 383 aaKnown RBP11.54□□□□□ -0.56
CHD7-206ENST00000527900 SLC52A2Q9HAB3 445 aa11.54□□□□□ -0.56
CHD7-206ENST00000527900 C4AP0C0L4 1744 aa11.54□□□□□ -0.56
CHD7-206ENST00000527900 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
CHD7-206ENST00000527900 PTCD1O75127 700 aaKnown RBP11.53□□□□□ -0.56
CHD7-206ENST00000527900 GYS1P13807 737 aa11.53□□□□□ -0.56
CHD7-206ENST00000527900 INTS5Q6P9B9 1019 aaKnown RBP11.53□□□□□ -0.56
CHD7-206ENST00000527900 PELP1Q8IZL8 1130 aaKnown RBP11.53□□□□□ -0.56
CHD7-206ENST00000527900 MMP10P09238 476 aa11.52□□□□□ -0.57
CHD7-206ENST00000527900 CRKLP46109 303 aaKnown RBP11.52□□□□□ -0.57
CHD7-206ENST00000527900 NLGN1Q8N2Q7 840 aa11.52□□□□□ -0.57
CHD7-206ENST00000527900 UBR2Q8IWV8 1755 aa11.51□□□□□ -0.57
CHD7-206ENST00000527900 KCPQ6ZWJ8 1503 aa11.5□□□□□ -0.57
CHD7-206ENST00000527900 RFC4P35249 363 aa11.5□□□□□ -0.57
CHD7-206ENST00000527900 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
CHD7-206ENST00000527900 PXDNLA1KZ92 1463 aa11.5□□□□□ -0.57
CHD7-206ENST00000527900 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
CHD7-206ENST00000527900 N4BP2Q86UW6 1770 aaPredicted RBP11.49□□□□□ -0.57
CHD7-206ENST00000527900 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
CHD7-206ENST00000527900 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
CHD7-206ENST00000527900 HOXD11P31277 338 aaPredicted RBP11.49□□□□□ -0.57
CHD7-206ENST00000527900 TGFB2P61812 414 aa11.49□□□□□ -0.57
CHD7-206ENST00000527900 SLC39A6Q13433 755 aa11.49□□□□□ -0.57
CHD7-206ENST00000527900 DNAJC10Q8IXB1 793 aa11.49□□□□□ -0.57
CHD7-206ENST00000527900 IL17REQ8NFR9 667 aa11.49□□□□□ -0.57
CHD7-206ENST00000527900 C10orf71Q711Q0 1435 aa11.49□□□□□ -0.57
CHD7-206ENST00000527900 KCNA3P22001 575 aa11.48□□□□□ -0.57
CHD7-206ENST00000527900 TM4SF1P30408 202 aa11.48□□□□□ -0.57
CHD7-206ENST00000527900 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
CHD7-206ENST00000527900 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
CHD7-206ENST00000527900 USP42Q9H9J4 1324 aaKnown RBP11.48□□□□□ -0.57
CHD7-206ENST00000527900 ADCY9O60503 1353 aa11.48□□□□□ -0.57
CHD7-206ENST00000527900 SOS1Q07889 1333 aaPredicted RBP11.47□□□□□ -0.57
CHD7-206ENST00000527900 C1QTNF8P60827 252 aa11.47□□□□□ -0.57
CHD7-206ENST00000527900 FKBP8Q14318 412 aa11.47□□□□□ -0.57
CHD7-206ENST00000527900 PHACTR3Q96KR7 559 aa11.47□□□□□ -0.57
CHD7-206ENST00000527900 CCDC87Q9NVE4 849 aa11.47□□□□□ -0.57
CHD7-206ENST00000527900 CEMIPQ8WUJ3 1361 aa11.46□□□□□ -0.57
CHD7-206ENST00000527900 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
CHD7-206ENST00000527900 U2SURPO15042 1029 aaKnown RBP11.46□□□□□ -0.57
CHD7-206ENST00000527900 PPP2R1AP30153 589 aa11.46□□□□□ -0.57
CHD7-206ENST00000527900 DDR1Q08345 913 aa11.46□□□□□ -0.57
CHD7-206ENST00000527900 PPP4R3CPQ6ZMV5 832 aa11.46□□□□□ -0.57
CHD7-206ENST00000527900 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
CHD7-206ENST00000527900 GNAT3A8MTJ3 354 aa11.45□□□□□ -0.58
CHD7-206ENST00000527900 POLRMTO00411 1230 aaKnown RBP11.45□□□□□ -0.58
CHD7-206ENST00000527900 DPEP1P16444 411 aa11.45□□□□□ -0.58
CHD7-206ENST00000527900 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
CHD7-206ENST00000527900 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms