RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 ATP10DQ9P241 1426 aa6.13□□□□□ -1.43
CHD7-205ENST00000527825 PARP4Q9UKK3 1724 aaKnown RBP6.13□□□□□ -1.43
CHD7-205ENST00000527825 EVA1CP58658 441 aa6.12□□□□□ -1.43
CHD7-205ENST00000527825 TSR1Q2NL82 804 aaKnown RBP6.12□□□□□ -1.43
CHD7-205ENST00000527825 SPATA31A1Q5TZJ5 1347 aa6.12□□□□□ -1.43
CHD7-205ENST00000527825 ANKK1Q8NFD2 765 aa6.12□□□□□ -1.43
CHD7-205ENST00000527825 ALS2Q96Q42 1657 aa6.12□□□□□ -1.43
CHD7-205ENST00000527825 PDGFDQ9GZP0 370 aaPredicted RBP6.12□□□□□ -1.43
CHD7-205ENST00000527825 PRDM11Q9NQV5 511 aa6.12□□□□□ -1.43
CHD7-205ENST00000527825 PPLO60437 1756 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 KNDC1Q76NI1 1749 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 CRYBG1Q9Y4K1 1723 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 PRAG1Q86YV5 1406 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 MAP3K5Q99683 1374 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 TRIM6-TRIM34B2RNG4 842 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 MAP3K7O43318 606 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 GRIN3BO60391 1043 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 SLC24A1O60721 1099 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 ZEB1P37275 1124 aaPredicted RBP6.11□□□□□ -1.43
CHD7-205ENST00000527825 LAPTM4BQ86VI4 370 aa6.11□□□□□ -1.43
CHD7-205ENST00000527825 SEPT9Q9UHD8 586 aaPredicted RBP6.11□□□□□ -1.43
CHD7-205ENST00000527825 TRPM3Q9HCF6 1732 aaPredicted RBP6.11□□□□□ -1.43
CHD7-205ENST00000527825 CLTCL1P53675 1640 aa6.1□□□□□ -1.43
CHD7-205ENST00000527825 TECPR2O15040 1411 aa6.1□□□□□ -1.43
CHD7-205ENST00000527825 AATKQ6ZMQ8 1374 aa6.1□□□□□ -1.43
CHD7-205ENST00000527825 GRXCR2A6NFK2 248 aa6.1□□□□□ -1.43
CHD7-205ENST00000527825 PLSCR1O15162 318 aa6.1□□□□□ -1.43
CHD7-205ENST00000527825 BCAMP50895 628 aa6.1□□□□□ -1.43
CHD7-205ENST00000527825 ZFRQ96KR1 1074 aaKnown RBP6.1□□□□□ -1.43
CHD7-205ENST00000527825 PHRF1Q9P1Y6 1649 aaKnown RBP6.1□□□□□ -1.43
CHD7-205ENST00000527825 KAT6BQ8WYB5 2073 aa6.1□□□□□ -1.43
CHD7-205ENST00000527825 NRXN1Q9ULB1 1477 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 OVOS2A0A0G2JMS6 1433 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 OVOS2A0A0J9YW53 1432 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 OVOS2Q6IE36 1432 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 SOWAHBA6NEL2 793 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 SEMA3EO15041 775 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 POLD1P28340 1107 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 PRIM1P49642 420 aaKnown RBP6.09□□□□□ -1.43
CHD7-205ENST00000527825 SLC15A2Q16348 729 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 STK26Q9P289 416 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 WWC3Q9ULE0 1092 aa6.09□□□□□ -1.43
CHD7-205ENST00000527825 PEAK1Q9H792 1746 aa6.08□□□□□ -1.44
CHD7-205ENST00000527825 TRIM26Q12899 539 aaPredicted RBP6.08□□□□□ -1.44
CHD7-205ENST00000527825 BARGINQ6ZT62 677 aa6.08□□□□□ -1.44
CHD7-205ENST00000527825 WAPLQ7Z5K2 1190 aa6.08□□□□□ -1.44
CHD7-205ENST00000527825 TSKSQ9UJT2 592 aa6.08□□□□□ -1.44
CHD7-205ENST00000527825 WNK3Q9BYP7 1800 aa6.08□□□□□ -1.44
CHD7-205ENST00000527825 QSER1Q2KHR3 1735 aa6.08□□□□□ -1.44
CHD7-205ENST00000527825 ARHGEF28Q8N1W1 1705 aaKnown RBP6.08□□□□□ -1.44
CHD7-205ENST00000527825 NUP155O75694 1391 aa6.07□□□□□ -1.44
CHD7-205ENST00000527825 GPRASP1Q5JY77 1395 aa6.07□□□□□ -1.44
CHD7-205ENST00000527825 DHX57Q6P158 1386 aaKnown RBP6.07□□□□□ -1.44
CHD7-205ENST00000527825 OSBPP22059 807 aa6.07□□□□□ -1.44
CHD7-205ENST00000527825 MLLT3P42568 568 aaPredicted RBP6.07□□□□□ -1.44
CHD7-205ENST00000527825 CHRNA2Q15822 529 aa6.07□□□□□ -1.44
CHD7-205ENST00000527825 KANK4Q5T7N3 995 aaPredicted RBP6.07□□□□□ -1.44
CHD7-205ENST00000527825 TCP11L2Q8N4U5 519 aa6.07□□□□□ -1.44
CHD7-205ENST00000527825 LRRC37A3O60309 1634 aa6.07□□□□□ -1.44
CHD7-205ENST00000527825 FAM50AQ14320 339 aaKnown RBP6.06□□□□□ -1.44
CHD7-205ENST00000527825 TXNRD1Q16881 649 aa6.06□□□□□ -1.44
CHD7-205ENST00000527825 PACS2Q86VP3 889 aa6.06□□□□□ -1.44
CHD7-205ENST00000527825 PMFBP1Q8TBY8 1022 aa6.06□□□□□ -1.44
CHD7-205ENST00000527825 THRAP3Q9Y2W1 955 aaKnown RBP6.06□□□□□ -1.44
CHD7-205ENST00000527825 SSH2Q76I76 1423 aa6.06□□□□□ -1.44
CHD7-205ENST00000527825 UTRNP46939 3433 aa6.06□□□□□ -1.44
CHD7-205ENST00000527825 KIAA0232Q92628 1395 aa6.06□□□□□ -1.44
CHD7-205ENST00000527825 ITSN1Q15811 1721 aa6.05□□□□□ -1.44
CHD7-205ENST00000527825 COL24A1Q17RW2 1714 aa6.05□□□□□ -1.44
CHD7-205ENST00000527825 DNAJC5GQ8N7S2 189 aa6.05□□□□□ -1.44
CHD7-205ENST00000527825 CDCA7LQ96GN5 454 aa6.05□□□□□ -1.44
CHD7-205ENST00000527825 CDHR5Q9HBB8 845 aa6.05□□□□□ -1.44
CHD7-205ENST00000527825 WBP1LQ9NX94 342 aa6.05□□□□□ -1.44
CHD7-205ENST00000527825 FAM198AQ9UFP1 575 aa6.05□□□□□ -1.44
CHD7-205ENST00000527825 TUBGCP6Q96RT7 1819 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 ATP7BP35670 1465 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 TESPA1A2RU30 521 aaPredicted RBP6.04□□□□□ -1.44
CHD7-205ENST00000527825 YBX3P16989 372 aaKnown RBP eCLIP6.04□□□□□ -1.44
CHD7-205ENST00000527825 PRSS12P56730 875 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 ZC3H6P61129 1189 aaKnown RBP6.04□□□□□ -1.44
CHD7-205ENST00000527825 DDB1Q16531 1140 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 NLGN2Q8NFZ4 835 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 KLRG1Q96E93 195 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 LRCH3Q96II8 777 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.04□□□□□ -1.44
CHD7-205ENST00000527825 VPS8Q8N3P4 1428 aa6.04□□□□□ -1.44
CHD7-205ENST00000527825 RPGRIP1LQ68CZ1 1315 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 SMAPO00193 183 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 TOMM70O94826 608 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 ITGBL1O95965 494 aaPredicted RBP6.03□□□□□ -1.44
CHD7-205ENST00000527825 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
CHD7-205ENST00000527825 NYAP1Q6ZVC0 841 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 C16orf71Q8IYS4 520 aaPredicted RBP6.03□□□□□ -1.44
CHD7-205ENST00000527825 JMYQ8N9B5 988 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 HPS5Q9UPZ3 1129 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 PIK3C2AO00443 1686 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 PLEKHH1Q9ULM0 1364 aa6.03□□□□□ -1.44
CHD7-205ENST00000527825 BTAF1O14981 1849 aa6.02□□□□□ -1.45
CHD7-205ENST00000527825 NHSQ6T4R5 1651 aa6.02□□□□□ -1.45
CHD7-205ENST00000527825 C3orf80F5H4A9 247 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms