RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ANXA1P04083 346 aa18.19■□□□□ 0.5
USP47-207ENST00000527733 ROBO2Q9HCK4 1378 aa18.19■□□□□ 0.5
USP47-207ENST00000527733 ERICH2A1L162 156 aa18.19■□□□□ 0.5
USP47-207ENST00000527733 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
USP47-207ENST00000527733 DCAF5Q96JK2 942 aa18.19■□□□□ 0.5
USP47-207ENST00000527733 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.19■□□□□ 0.5
USP47-207ENST00000527733 CHMP5Q9NZZ3 219 aa18.19■□□□□ 0.5
USP47-207ENST00000527733 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
USP47-207ENST00000527733 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
USP47-207ENST00000527733 KDM5CP41229 1560 aa18.18■□□□□ 0.5
USP47-207ENST00000527733 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
USP47-207ENST00000527733 CHPF2Q9P2E5 772 aa18.17■□□□□ 0.5
USP47-207ENST00000527733 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
USP47-207ENST00000527733 VAMP4O75379 141 aa18.17■□□□□ 0.5
USP47-207ENST00000527733 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
USP47-207ENST00000527733 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
USP47-207ENST00000527733 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
USP47-207ENST00000527733 BTG4Q9NY30 223 aa18.17■□□□□ 0.5
USP47-207ENST00000527733 SMC3Q9UQE7 1217 aa18.17■□□□□ 0.5
USP47-207ENST00000527733 FAM135BQ49AJ0 1406 aa18.16■□□□□ 0.5
USP47-207ENST00000527733 A2ML1A8K2U0 1454 aa18.16■□□□□ 0.5
USP47-207ENST00000527733 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
USP47-207ENST00000527733 MCTP1Q6DN14 999 aa18.16■□□□□ 0.5
USP47-207ENST00000527733 DDX17Q92841 729 aaKnown RBP18.16■□□□□ 0.5
USP47-207ENST00000527733 RABEP1Q15276 862 aa18.15■□□□□ 0.5
USP47-207ENST00000527733 NEK4P51957 841 aa18.15■□□□□ 0.5
USP47-207ENST00000527733 TRIM29Q14134 588 aa18.15■□□□□ 0.5
USP47-207ENST00000527733 NUTM1Q86Y26 1132 aa18.15■□□□□ 0.5
USP47-207ENST00000527733 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
USP47-207ENST00000527733 MX1P20591 662 aa18.15■□□□□ 0.5
USP47-207ENST00000527733 RNF17Q9BXT8 1623 aaKnown RBP18.14■□□□□ 0.5
USP47-207ENST00000527733 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 GLRX3O76003 335 aaKnown RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 MAP4K4O95819 1239 aaPredicted RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 FKBP4Q02790 459 aaKnown RBP eCLIP18.14■□□□□ 0.49
USP47-207ENST00000527733 IFIT5Q13325 482 aaKnown RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 METTL24Q5JXM2 366 aa18.14■□□□□ 0.49
USP47-207ENST00000527733 TSPYL6Q8N831 410 aa18.14■□□□□ 0.49
USP47-207ENST00000527733 FOXD4L6Q3SYB3 417 aaPredicted RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 FOXD4L3Q6VB84 417 aaPredicted RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 NUCB2P80303 420 aa18.14■□□□□ 0.49
USP47-207ENST00000527733 DNTTIP2Q5QJE6 756 aaKnown RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 RASSF8Q8NHQ8 419 aa18.14■□□□□ 0.49
USP47-207ENST00000527733 CWC25Q9NXE8 425 aaPredicted RBP18.14■□□□□ 0.49
USP47-207ENST00000527733 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
USP47-207ENST00000527733 CLTCL1P53675 1640 aa18.14■□□□□ 0.49
USP47-207ENST00000527733 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 INSRP06213 1382 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 GPTP24298 496 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 MCM2P49736 904 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 ZSCAN25Q6NSZ9 544 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 SMARCA5O60264 1052 aaPredicted RBP18.13■□□□□ 0.49
USP47-207ENST00000527733 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
USP47-207ENST00000527733 PCDH11XQ9BZA7 1347 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 PCDH11YQ9BZA8 1340 aa18.13■□□□□ 0.49
USP47-207ENST00000527733 UBE3BQ7Z3V4 1068 aa18.12■□□□□ 0.49
USP47-207ENST00000527733 DDX49Q9Y6V7 483 aaKnown RBP18.12■□□□□ 0.49
USP47-207ENST00000527733 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
USP47-207ENST00000527733 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
USP47-207ENST00000527733 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 BABAM1Q9NWV8 329 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 NBPF6Q5VWK0 638 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 NBPF4Q96M43 638 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
USP47-207ENST00000527733 ATP7BP35670 1465 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 RAD21O60216 631 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 KSR2Q6VAB6 950 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 ACSBG1Q96GR2 724 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 PHF14O94880 888 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 DRC7Q8IY82 874 aa18.11■□□□□ 0.49
USP47-207ENST00000527733 VPS37CA5D8V6 355 aaPredicted RBP18.1■□□□□ 0.49
USP47-207ENST00000527733 MARCH6O60337 910 aa18.1■□□□□ 0.49
USP47-207ENST00000527733 ALDH1L1O75891 902 aa18.1■□□□□ 0.49
USP47-207ENST00000527733 SART3Q15020 963 aaKnown RBP18.1■□□□□ 0.49
USP47-207ENST00000527733 PPP1R42Q7Z4L9 355 aa18.1■□□□□ 0.49
USP47-207ENST00000527733 MEIS3Q99687 375 aa18.1■□□□□ 0.49
USP47-207ENST00000527733 SKOR2Q2VWA4 1001 aaPredicted RBP18.1■□□□□ 0.49
USP47-207ENST00000527733 CDCA7Q9BWT1 371 aaPredicted RBP18.1■□□□□ 0.49
USP47-207ENST00000527733 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
USP47-207ENST00000527733 LMTK2Q8IWU2 1503 aa18.09■□□□□ 0.49
USP47-207ENST00000527733 PRR36Q9H6K5 1346 aa18.09■□□□□ 0.49
USP47-207ENST00000527733 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
USP47-207ENST00000527733 KAT6BQ8WYB5 2073 aa18.09■□□□□ 0.49
USP47-207ENST00000527733 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
USP47-207ENST00000527733 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
USP47-207ENST00000527733 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.09■□□□□ 0.49
USP47-207ENST00000527733 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.49
USP47-207ENST00000527733 AK7Q96M32 723 aa18.08■□□□□ 0.49
USP47-207ENST00000527733 GOLGA6L3A6NEY3 463 aa18.08■□□□□ 0.49
USP47-207ENST00000527733 IFIT1P09914 478 aaKnown RBP18.08■□□□□ 0.49
USP47-207ENST00000527733 CWC27Q6UX04 472 aaKnown RBP18.08■□□□□ 0.49
USP47-207ENST00000527733 DEKP35659 375 aaKnown RBP18.08■□□□□ 0.48
USP47-207ENST00000527733 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.48
USP47-207ENST00000527733 CHL1O00533 1208 aa18.08■□□□□ 0.48
USP47-207ENST00000527733 HDAC1Q13547 482 aaPredicted RBP18.08■□□□□ 0.48
USP47-207ENST00000527733 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.48
USP47-207ENST00000527733 AATKQ6ZMQ8 1374 aa18.08■□□□□ 0.48
USP47-207ENST00000527733 ATP6V1AP38606 617 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms