RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 LMO7Q8WWI1 1683 aa21.78■■□□□ 1.08
USH1C-205ENST00000527020 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.07
USH1C-205ENST00000527020 PXDNLA1KZ92 1463 aa21.76■■□□□ 1.07
USH1C-205ENST00000527020 BRPF3Q9ULD4 1205 aa21.76■■□□□ 1.07
USH1C-205ENST00000527020 PSME1Q06323 249 aa21.75■■□□□ 1.07
USH1C-205ENST00000527020 HSP90AB1P08238 724 aaKnown RBP21.75■■□□□ 1.07
USH1C-205ENST00000527020 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
USH1C-205ENST00000527020 OSBPL3Q9H4L5 887 aa21.75■■□□□ 1.07
USH1C-205ENST00000527020 K7ELQ4 463 aaPredicted RBP21.74■■□□□ 1.07
USH1C-205ENST00000527020 GNAI3P08754 354 aa21.73■■□□□ 1.07
USH1C-205ENST00000527020 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
USH1C-205ENST00000527020 EXOC6BQ9Y2D4 811 aa21.73■■□□□ 1.07
USH1C-205ENST00000527020 NPHP4O75161 1426 aaPredicted RBP21.73■■□□□ 1.07
USH1C-205ENST00000527020 SALL3Q9BXA9 1300 aa21.73■■□□□ 1.07
USH1C-205ENST00000527020 PNMA6EA0A0J9YXQ4 647 aa21.72■■□□□ 1.07
USH1C-205ENST00000527020 EIF5BO60841 1220 aaKnown RBP21.72■■□□□ 1.07
USH1C-205ENST00000527020 KCNH5Q8NCM2 988 aa21.72■■□□□ 1.07
USH1C-205ENST00000527020 SLIT3O75094 1523 aa21.72■■□□□ 1.07
USH1C-205ENST00000527020 PDE1AP54750 535 aa21.72■■□□□ 1.07
USH1C-205ENST00000527020 CIZ1Q9ULV3 898 aaPredicted RBP21.72■■□□□ 1.07
USH1C-205ENST00000527020 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
USH1C-205ENST00000527020 HDGFL1Q5TGJ6 251 aa21.71■■□□□ 1.07
USH1C-205ENST00000527020 TRPM3Q9HCF6 1732 aaPredicted RBP21.71■■□□□ 1.07
USH1C-205ENST00000527020 LRRC59Q96AG4 307 aaKnown RBP21.71■■□□□ 1.07
USH1C-205ENST00000527020 ORAI2Q96SN7 254 aa21.71■■□□□ 1.07
USH1C-205ENST00000527020 PHAXQ9H814 394 aaKnown RBP21.71■■□□□ 1.07
USH1C-205ENST00000527020 NCAPD2Q15021 1401 aa21.7■■□□□ 1.06
USH1C-205ENST00000527020 EIF4A1P60842 406 aaKnown RBP21.7■■□□□ 1.06
USH1C-205ENST00000527020 USP44Q9H0E7 712 aa21.7■■□□□ 1.06
USH1C-205ENST00000527020 LRRFIP2Q9Y608 721 aaKnown RBP21.69■■□□□ 1.06
USH1C-205ENST00000527020 IBTKQ9P2D0 1353 aaPredicted RBP21.69■■□□□ 1.06
USH1C-205ENST00000527020 ZBTB7CA1YPR0 619 aa21.68■■□□□ 1.06
USH1C-205ENST00000527020 RAB3GAP1Q15042 981 aa21.68■■□□□ 1.06
USH1C-205ENST00000527020 CAMTA1Q9Y6Y1 1673 aa21.68■■□□□ 1.06
USH1C-205ENST00000527020 RABEP1Q15276 862 aa21.68■■□□□ 1.06
USH1C-205ENST00000527020 TNPO1Q92973 898 aaKnown RBP21.68■■□□□ 1.06
USH1C-205ENST00000527020 PXDNQ92626 1479 aa21.67■■□□□ 1.06
USH1C-205ENST00000527020 KCNQ3O43525 872 aa21.67■■□□□ 1.06
USH1C-205ENST00000527020 XPCQ01831 940 aaPredicted RBP21.67■■□□□ 1.06
USH1C-205ENST00000527020 ARHGEF25Q86VW2 580 aa21.67■■□□□ 1.06
USH1C-205ENST00000527020 LRRCC1Q9C099 1032 aa21.67■■□□□ 1.06
USH1C-205ENST00000527020 FOXD4L1Q9NU39 408 aa21.67■■□□□ 1.06
USH1C-205ENST00000527020 GCP02774 474 aa21.66■■□□□ 1.06
USH1C-205ENST00000527020 TSHZ3Q63HK5 1081 aa21.66■■□□□ 1.06
USH1C-205ENST00000527020 CASC1Q6TDU7 716 aa21.66■■□□□ 1.06
USH1C-205ENST00000527020 TRAK2O60296 914 aa21.65■■□□□ 1.06
USH1C-205ENST00000527020 AKAP4Q5JQC9 854 aa21.65■■□□□ 1.06
USH1C-205ENST00000527020 RGPD5Q99666 1765 aa21.65■■□□□ 1.06
USH1C-205ENST00000527020 HOXB7P09629 217 aa21.65■■□□□ 1.06
USH1C-205ENST00000527020 ZNF530Q6P9A1 599 aaPredicted RBP21.65■■□□□ 1.06
USH1C-205ENST00000527020 AK9Q5TCS8 1911 aa21.65■■□□□ 1.06
USH1C-205ENST00000527020 DDX11L8A8MPP1 907 aa21.64■■□□□ 1.05
USH1C-205ENST00000527020 EIF2S2P20042 333 aaKnown RBP21.64■■□□□ 1.05
USH1C-205ENST00000527020 SIPA1L3O60292 1781 aaPredicted RBP21.64■■□□□ 1.05
USH1C-205ENST00000527020 ERC2O15083 957 aa21.63■■□□□ 1.05
USH1C-205ENST00000527020 UBTFL1P0CB47 393 aaPredicted RBP21.63■■□□□ 1.05
USH1C-205ENST00000527020 CHPF2Q9P2E5 772 aa21.63■■□□□ 1.05
USH1C-205ENST00000527020 HSP90AA1P07900 732 aaKnown RBP21.63■■□□□ 1.05
USH1C-205ENST00000527020 MX1P20591 662 aa21.63■■□□□ 1.05
USH1C-205ENST00000527020 PLEKHO1Q53GL0 409 aaPredicted RBP21.63■■□□□ 1.05
USH1C-205ENST00000527020 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
USH1C-205ENST00000527020 SSH3Q8TE77 659 aa21.63■■□□□ 1.05
USH1C-205ENST00000527020 REC8O95072 547 aa21.62■■□□□ 1.05
USH1C-205ENST00000527020 STAP2Q9UGK3 403 aa21.61■■□□□ 1.05
USH1C-205ENST00000527020 SRCIN1Q9C0H9 1055 aa21.61■■□□□ 1.05
USH1C-205ENST00000527020 KIF1AQ12756 1690 aa21.61■■□□□ 1.05
USH1C-205ENST00000527020 FSD2A1L4K1 749 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 RNMTO43148 476 aaKnown RBP21.6■■□□□ 1.05
USH1C-205ENST00000527020 TEFQ10587 303 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 AMOTQ4VCS5 1084 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 ANKRD24Q8TF21 1146 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 GZF1Q9H116 711 aaPredicted RBP21.6■■□□□ 1.05
USH1C-205ENST00000527020 AXIN2Q9Y2T1 843 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 OVOS2A0A0G2JMS6 1433 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 PLEKHG5O94827 1062 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 POLA2Q14181 598 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 BEND3Q5T5X7 828 aa21.6■■□□□ 1.05
USH1C-205ENST00000527020 ALS2Q96Q42 1657 aa21.59■■□□□ 1.05
USH1C-205ENST00000527020 ADCY9O60503 1353 aa21.59■■□□□ 1.05
USH1C-205ENST00000527020 RTN4Q9NQC3 1192 aaKnown RBP21.58■■□□□ 1.05
USH1C-205ENST00000527020 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
USH1C-205ENST00000527020 PI4KAP2A4QPH2 592 aa21.58■■□□□ 1.04
USH1C-205ENST00000527020 ANXA1P04083 346 aa21.58■■□□□ 1.04
USH1C-205ENST00000527020 SSFA2P28290 1259 aa21.58■■□□□ 1.04
USH1C-205ENST00000527020 PPP1R42Q7Z4L9 355 aa21.58■■□□□ 1.04
USH1C-205ENST00000527020 PI4KAP1Q8N8J0 262 aa21.58■■□□□ 1.04
USH1C-205ENST00000527020 DNAAF4Q8WXU2 420 aa21.58■■□□□ 1.04
USH1C-205ENST00000527020 GBP4Q96PP9 640 aa21.58■■□□□ 1.04
USH1C-205ENST00000527020 NBPF7P0C2Y1 421 aaPredicted RBP21.57■■□□□ 1.04
USH1C-205ENST00000527020 L1TD1Q5T7N2 865 aaKnown RBP21.57■■□□□ 1.04
USH1C-205ENST00000527020 ESYT1Q9BSJ8 1104 aa21.57■■□□□ 1.04
USH1C-205ENST00000527020 HEG1Q9ULI3 1381 aa21.57■■□□□ 1.04
USH1C-205ENST00000527020 MST1RQ04912 1400 aa21.57■■□□□ 1.04
USH1C-205ENST00000527020 KRT28Q7Z3Y7 464 aa21.57■■□□□ 1.04
USH1C-205ENST00000527020 LMOD2Q6P5Q4 547 aa21.56■■□□□ 1.04
USH1C-205ENST00000527020 C1orf141Q5JVX7 400 aa21.55■■□□□ 1.04
USH1C-205ENST00000527020 UNC5CLQ8IV45 518 aa21.55■■□□□ 1.04
USH1C-205ENST00000527020 IL1RAPL2Q9NP60 686 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms