RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 C4AP0C0L4 1744 aa15.18■□□□□ 0.02
CTSB-212ENST00000526645 COL13A1Q5TAT6 717 aaPredicted RBP15.18■□□□□ 0.02
CTSB-212ENST00000526645 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
CTSB-212ENST00000526645 ARHGAP27Q6ZUM4 889 aa15.17■□□□□ 0.02
CTSB-212ENST00000526645 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
CTSB-212ENST00000526645 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
CTSB-212ENST00000526645 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
CTSB-212ENST00000526645 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
CTSB-212ENST00000526645 PRELPP51888 382 aa15.16■□□□□ 0.02
CTSB-212ENST00000526645 HSP90AB2PQ58FF8 381 aa15.16■□□□□ 0.02
CTSB-212ENST00000526645 SMIM5Q71RC9 77 aa15.16■□□□□ 0.02
CTSB-212ENST00000526645 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
CTSB-212ENST00000526645 FYB1O15117 783 aa15.15■□□□□ 0.02
CTSB-212ENST00000526645 FCHSD2O94868 740 aa15.15■□□□□ 0.02
CTSB-212ENST00000526645 ADRA2BP18089 450 aa15.15■□□□□ 0.02
CTSB-212ENST00000526645 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
CTSB-212ENST00000526645 TESK2Q96S53 571 aa15.15■□□□□ 0.02
CTSB-212ENST00000526645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.02
CTSB-212ENST00000526645 ANKRD26Q9UPS8 1709 aa15.14■□□□□ 0.01
CTSB-212ENST00000526645 KDRP35968 1356 aa15.14■□□□□ 0.01
CTSB-212ENST00000526645 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
CTSB-212ENST00000526645 TMF1P82094 1093 aa15.14■□□□□ 0.01
CTSB-212ENST00000526645 ITPK1Q13572 414 aa15.14■□□□□ 0.01
CTSB-212ENST00000526645 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
CTSB-212ENST00000526645 RTCBQ9Y3I0 505 aaKnown RBP15.14■□□□□ 0.01
CTSB-212ENST00000526645 KCPQ6ZWJ8 1503 aa15.13■□□□□ 0.01
CTSB-212ENST00000526645 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
CTSB-212ENST00000526645 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
CTSB-212ENST00000526645 C9orf131Q5VYM1 1079 aa15.13■□□□□ 0.01
CTSB-212ENST00000526645 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
CTSB-212ENST00000526645 CAPN15O75808 1086 aa15.12■□□□□ 0.01
CTSB-212ENST00000526645 DPEP1P16444 411 aa15.12■□□□□ 0.01
CTSB-212ENST00000526645 ASAP1Q9ULH1 1129 aa15.12■□□□□ 0.01
CTSB-212ENST00000526645 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
CTSB-212ENST00000526645 HTRA3P83110 453 aa15.11■□□□□ 0.01
CTSB-212ENST00000526645 SMC1BQ8NDV3 1235 aa15.11■□□□□ 0.01
CTSB-212ENST00000526645 ZC3H4Q9UPT8 1303 aaKnown RBP15.11■□□□□ 0.01
CTSB-212ENST00000526645 RC3H1Q5TC82 1133 aaKnown RBP15.1■□□□□ 0.01
CTSB-212ENST00000526645 IFNL2Q8IZJ0 200 aa15.1■□□□□ 0.01
CTSB-212ENST00000526645 DCAF5Q96JK2 942 aa15.1■□□□□ 0.01
CTSB-212ENST00000526645 PIM2Q9P1W9 311 aa15.1■□□□□ 0.01
CTSB-212ENST00000526645 CNTNAP4Q9C0A0 1308 aa15.1■□□□□ 0.01
CTSB-212ENST00000526645 ST20-MTHFSA0A0A6YYL1 179 aa15.09■□□□□ 0.01
CTSB-212ENST00000526645 GYS1P13807 737 aa15.09■□□□□ 0.01
CTSB-212ENST00000526645 ATG3Q9NT62 314 aa15.09■□□□□ 0.01
CTSB-212ENST00000526645 RNF181Q9P0P0 153 aa15.09■□□□□ 0.01
CTSB-212ENST00000526645 PHKG2P15735 406 aa15.08■□□□□ 0
CTSB-212ENST00000526645 RFC4P35249 363 aa15.08■□□□□ 0
CTSB-212ENST00000526645 DALRD3Q5D0E6 543 aaKnown RBP15.08■□□□□ 0
CTSB-212ENST00000526645 ARHGEF1Q92888 912 aaKnown RBP15.08■□□□□ 0
CTSB-212ENST00000526645 RPS6KA4O75676 772 aa15.07■□□□□ 0
CTSB-212ENST00000526645 KCNA3P22001 575 aa15.07■□□□□ 0
CTSB-212ENST00000526645 RRAGCQ9HB90 399 aa15.06■□□□□ 0
CTSB-212ENST00000526645 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
CTSB-212ENST00000526645 SBF1O95248 1867 aa15.06■□□□□ 0
CTSB-212ENST00000526645 HSPA1AP0DMV8 641 aaKnown RBP15.05■□□□□ -0
CTSB-212ENST00000526645 HSPA1BP0DMV9 641 aaKnown RBP15.05■□□□□ -0
CTSB-212ENST00000526645 WASHC2AQ641Q2 1341 aa15.05■□□□□ -0
CTSB-212ENST00000526645 KDM6AO15550 1401 aaPredicted RBP15.05■□□□□ -0
CTSB-212ENST00000526645 ERVV-2B6SEH9 535 aa15.04■□□□□ -0
CTSB-212ENST00000526645 CDCA8Q53HL2 280 aa15.04■□□□□ -0
CTSB-212ENST00000526645 HSP90AB1P08238 724 aaKnown RBP15.03■□□□□ -0
CTSB-212ENST00000526645 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
CTSB-212ENST00000526645 EYA1Q99502 592 aa15.03■□□□□ -0
CTSB-212ENST00000526645 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
CTSB-212ENST00000526645 TIAM2Q8IVF5 1701 aa15.02□□□□□ -0.01
CTSB-212ENST00000526645 USP42Q9H9J4 1324 aaKnown RBP15.01□□□□□ -0.01
CTSB-212ENST00000526645 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
CTSB-212ENST00000526645 VEGFAP15692 232 aaPredicted RBP15.01□□□□□ -0.01
CTSB-212ENST00000526645 MYH14Q7Z406 1995 aaKnown RBP15.01□□□□□ -0.01
CTSB-212ENST00000526645 DLEC1Q9Y238 1755 aa15□□□□□ -0.01
CTSB-212ENST00000526645 GLTPD2A6NH11 291 aa14.99□□□□□ -0.01
CTSB-212ENST00000526645 LMNB1P20700 586 aa14.99□□□□□ -0.01
CTSB-212ENST00000526645 DDR1Q08345 913 aa14.99□□□□□ -0.01
CTSB-212ENST00000526645 TJP1Q07157 1748 aa14.99□□□□□ -0.01
CTSB-212ENST00000526645 PCNTO95613 3336 aa14.99□□□□□ -0.01
CTSB-212ENST00000526645 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
CTSB-212ENST00000526645 CHRNA5P30532 468 aa14.97□□□□□ -0.01
CTSB-212ENST00000526645 CRKLP46109 303 aaKnown RBP14.97□□□□□ -0.01
CTSB-212ENST00000526645 FKBP8Q14318 412 aa14.97□□□□□ -0.01
CTSB-212ENST00000526645 NRXN2Q9P2S2 1712 aa14.97□□□□□ -0.01
CTSB-212ENST00000526645 POLRMTO00411 1230 aaKnown RBP14.96□□□□□ -0.01
CTSB-212ENST00000526645 CABP4P57796 275 aa14.96□□□□□ -0.01
CTSB-212ENST00000526645 RASSF7Q02833 373 aa14.96□□□□□ -0.01
CTSB-212ENST00000526645 SRP68Q9UHB9 627 aaKnown RBP14.96□□□□□ -0.01
CTSB-212ENST00000526645 AMOTQ4VCS5 1084 aa14.95□□□□□ -0.02
CTSB-212ENST00000526645 PLEKHO1Q53GL0 409 aaPredicted RBP14.95□□□□□ -0.02
CTSB-212ENST00000526645 CARD14Q9BXL6 1004 aa14.95□□□□□ -0.02
CTSB-212ENST00000526645 TM4SF1P30408 202 aa14.94□□□□□ -0.02
CTSB-212ENST00000526645 EIF4A2Q14240 407 aaKnown RBP14.94□□□□□ -0.02
CTSB-212ENST00000526645 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
CTSB-212ENST00000526645 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
CTSB-212ENST00000526645 ZPR1O75312 459 aa14.93□□□□□ -0.02
CTSB-212ENST00000526645 ZNF530Q6P9A1 599 aaPredicted RBP14.93□□□□□ -0.02
CTSB-212ENST00000526645 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
CTSB-212ENST00000526645 AFDNP55196 1824 aaKnown RBP14.93□□□□□ -0.02
CTSB-212ENST00000526645 DPY19L2Q6NUT2 758 aa14.92□□□□□ -0.02
CTSB-212ENST00000526645 SLC34A2O95436 690 aa14.91□□□□□ -0.02
CTSB-212ENST00000526645 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
CTSB-212ENST00000526645 TTLL6Q8N841 843 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms