RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 COL23A1Q86Y22 540 aaPredicted RBP22.85■■□□□ 1.25
CCS-203ENST00000526058 LINC00116Q8NCU8 138 aa22.85■■□□□ 1.25
CCS-203ENST00000526058 LGR6Q9HBX8 967 aa22.85■■□□□ 1.25
CCS-203ENST00000526058 SLC16A10Q8TF71 515 aa22.84■■□□□ 1.25
CCS-203ENST00000526058 DDX10Q13206 875 aaKnown RBP22.83■■□□□ 1.25
CCS-203ENST00000526058 SLC4A9Q96Q91 983 aa22.83■■□□□ 1.25
CCS-203ENST00000526058 UBR3Q6ZT12 1888 aa22.82■■□□□ 1.24
CCS-203ENST00000526058 MSH5O43196 834 aa22.82■■□□□ 1.24
CCS-203ENST00000526058 HMGB2P26583 209 aaKnown RBP22.82■■□□□ 1.24
CCS-203ENST00000526058 AMIGO3Q86WK7 504 aa22.82■■□□□ 1.24
CCS-203ENST00000526058 RBM42Q9BTD8 480 aaKnown RBP22.82■■□□□ 1.24
CCS-203ENST00000526058 RNMTO43148 476 aaKnown RBP22.81■■□□□ 1.24
CCS-203ENST00000526058 SMIM5Q71RC9 77 aa22.81■■□□□ 1.24
CCS-203ENST00000526058 AK7Q96M32 723 aa22.81■■□□□ 1.24
CCS-203ENST00000526058 COL24A1Q17RW2 1714 aa22.81■■□□□ 1.24
CCS-203ENST00000526058 RSPH6AQ9H0K4 717 aa22.8■■□□□ 1.24
CCS-203ENST00000526058 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
CCS-203ENST00000526058 ADAMTS7Q9UKP4 1686 aa22.79■■□□□ 1.24
CCS-203ENST00000526058 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
CCS-203ENST00000526058 SLC52A2Q9HAB3 445 aa22.79■■□□□ 1.24
CCS-203ENST00000526058 ZNF831Q5JPB2 1677 aa22.78■■□□□ 1.24
CCS-203ENST00000526058 U2AF1L5P0DN76 240 aaPredicted RBP22.78■■□□□ 1.24
CCS-203ENST00000526058 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
CCS-203ENST00000526058 U2AF1Q01081 240 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCS-203ENST00000526058 ARXQ96QS3 562 aa22.78■■□□□ 1.24
CCS-203ENST00000526058 PTCD1O75127 700 aaKnown RBP22.77■■□□□ 1.24
CCS-203ENST00000526058 PHF14O94880 888 aa22.77■■□□□ 1.24
CCS-203ENST00000526058 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
CCS-203ENST00000526058 FHDC1Q9C0D6 1143 aaPredicted RBP22.77■■□□□ 1.24
CCS-203ENST00000526058 COL5A3P25940 1745 aaPredicted RBP22.77■■□□□ 1.23
CCS-203ENST00000526058 MRC1P22897 1456 aa22.76■■□□□ 1.23
CCS-203ENST00000526058 GNPATO15228 680 aa22.75■■□□□ 1.23
CCS-203ENST00000526058 POLD1P28340 1107 aa22.75■■□□□ 1.23
CCS-203ENST00000526058 MSL1Q68DK7 614 aa22.75■■□□□ 1.23
CCS-203ENST00000526058 GAS2L2Q8NHY3 880 aa22.75■■□□□ 1.23
CCS-203ENST00000526058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.74■■□□□ 1.23
CCS-203ENST00000526058 SYT17Q9BSW7 474 aa22.74■■□□□ 1.23
CCS-203ENST00000526058 MAP3K5Q99683 1374 aa22.74■■□□□ 1.23
CCS-203ENST00000526058 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
CCS-203ENST00000526058 GNAT3A8MTJ3 354 aa22.73■■□□□ 1.23
CCS-203ENST00000526058 SLC39A6Q13433 755 aa22.73■■□□□ 1.23
CCS-203ENST00000526058 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
CCS-203ENST00000526058 FCHSD2O94868 740 aa22.72■■□□□ 1.23
CCS-203ENST00000526058 SSFA2P28290 1259 aa22.72■■□□□ 1.23
CCS-203ENST00000526058 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
CCS-203ENST00000526058 TJP1Q07157 1748 aa22.71■■□□□ 1.23
CCS-203ENST00000526058 RALBP1Q15311 655 aa22.71■■□□□ 1.23
CCS-203ENST00000526058 RC3H1Q5TC82 1133 aaKnown RBP22.7■■□□□ 1.22
CCS-203ENST00000526058 UTRNP46939 3433 aa22.7■■□□□ 1.22
CCS-203ENST00000526058 CNTNAP4Q9C0A0 1308 aa22.69■■□□□ 1.22
CCS-203ENST00000526058 KLHL34Q8N239 644 aa22.69■■□□□ 1.22
CCS-203ENST00000526058 SIPA1L3O60292 1781 aaPredicted RBP22.68■■□□□ 1.22
CCS-203ENST00000526058 RTCBQ9Y3I0 505 aaKnown RBP22.68■■□□□ 1.22
CCS-203ENST00000526058 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
CCS-203ENST00000526058 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
CCS-203ENST00000526058 UBR2Q8IWV8 1755 aa22.66■■□□□ 1.22
CCS-203ENST00000526058 CRKLP46109 303 aaKnown RBP22.66■■□□□ 1.22
CCS-203ENST00000526058 TEFQ10587 303 aa22.66■■□□□ 1.22
CCS-203ENST00000526058 TRAPPC3LQ5T215 181 aa22.66■■□□□ 1.22
CCS-203ENST00000526058 DNAJC10Q8IXB1 793 aa22.66■■□□□ 1.22
CCS-203ENST00000526058 RPS6KA4O75676 772 aa22.65■■□□□ 1.22
CCS-203ENST00000526058 CEMIPQ8WUJ3 1361 aa22.64■■□□□ 1.22
CCS-203ENST00000526058 ARHGEF1Q92888 912 aaKnown RBP22.64■■□□□ 1.21
CCS-203ENST00000526058 GOLGB1Q14789 3259 aaKnown RBP22.63■■□□□ 1.21
CCS-203ENST00000526058 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
CCS-203ENST00000526058 INTS5Q6P9B9 1019 aaKnown RBP22.62■■□□□ 1.21
CCS-203ENST00000526058 MCM10Q7L590 875 aa22.62■■□□□ 1.21
CCS-203ENST00000526058 TTC5Q8N0Z6 440 aa22.62■■□□□ 1.21
CCS-203ENST00000526058 PLEKHF1Q96S99 279 aa22.62■■□□□ 1.21
CCS-203ENST00000526058 DLG5Q8TDM6 1919 aa22.62■■□□□ 1.21
CCS-203ENST00000526058 C4AP0C0L4 1744 aa22.62■■□□□ 1.21
CCS-203ENST00000526058 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
CCS-203ENST00000526058 ADRA2BP18089 450 aa22.61■■□□□ 1.21
CCS-203ENST00000526058 DCTN1Q14203 1278 aa22.61■■□□□ 1.21
CCS-203ENST00000526058 ZNF790Q6PG37 636 aa22.61■■□□□ 1.21
CCS-203ENST00000526058 NLGN2Q8NFZ4 835 aa22.61■■□□□ 1.21
CCS-203ENST00000526058 CYP19A1P11511 503 aaPredicted RBP22.6■■□□□ 1.21
CCS-203ENST00000526058 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
CCS-203ENST00000526058 RFC4P35249 363 aa22.59■■□□□ 1.21
CCS-203ENST00000526058 VSIG10Q8N0Z9 540 aa22.59■■□□□ 1.21
CCS-203ENST00000526058 ZNF496Q96IT1 587 aaPredicted RBP22.59■■□□□ 1.21
CCS-203ENST00000526058 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
CCS-203ENST00000526058 BTBD11A6QL63 1104 aa22.58■■□□□ 1.21
CCS-203ENST00000526058 KCNQ3O43525 872 aa22.58■■□□□ 1.21
CCS-203ENST00000526058 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
CCS-203ENST00000526058 NEFMP07197 916 aa22.57■■□□□ 1.2
CCS-203ENST00000526058 HEG1Q9ULI3 1381 aa22.56■■□□□ 1.2
CCS-203ENST00000526058 GYS1P13807 737 aa22.56■■□□□ 1.2
CCS-203ENST00000526058 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
CCS-203ENST00000526058 SRP68Q9UHB9 627 aaKnown RBP22.56■■□□□ 1.2
CCS-203ENST00000526058 MMP10P09238 476 aa22.55■■□□□ 1.2
CCS-203ENST00000526058 NLGN1Q8N2Q7 840 aa22.55■■□□□ 1.2
CCS-203ENST00000526058 ZBTB1Q9Y2K1 713 aa22.55■■□□□ 1.2
CCS-203ENST00000526058 FMNL2Q96PY5 1086 aa22.54■■□□□ 1.2
CCS-203ENST00000526058 PNNQ9H307 717 aaKnown RBP22.54■■□□□ 1.2
CCS-203ENST00000526058 CD2APQ9Y5K6 639 aa22.54■■□□□ 1.2
CCS-203ENST00000526058 SOS1Q07889 1333 aaPredicted RBP22.54■■□□□ 1.2
CCS-203ENST00000526058 NFE2L2Q16236 605 aa22.53■■□□□ 1.2
CCS-203ENST00000526058 MAPK8IP3Q9UPT6 1336 aa22.53■■□□□ 1.2
CCS-203ENST00000526058 STARD3NLO95772 234 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms