RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
PABPC4-220ENST00000525669 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
PABPC4-220ENST00000525669 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
PABPC4-220ENST00000525669 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
PABPC4-220ENST00000525669 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
PABPC4-220ENST00000525669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.611e-9■□□□□ 9.8
PABPC4-220ENST00000525669 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
PABPC4-220ENST00000525669 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
PABPC4-220ENST00000525669 SLIT2O94813 1529 aa11.22□□□□□ -0.61
PABPC4-220ENST00000525669 C8orf37Q96NL8 207 aa11.22□□□□□ -0.61
PABPC4-220ENST00000525669 PCDH11XQ9BZA7 1347 aa11.22□□□□□ -0.61
PABPC4-220ENST00000525669 PCDH11YQ9BZA8 1340 aa11.22□□□□□ -0.61
PABPC4-220ENST00000525669 PAPPAQ13219 1627 aa11.21□□□□□ -0.61
PABPC4-220ENST00000525669 MRC1P22897 1456 aa11.21□□□□□ -0.61
PABPC4-220ENST00000525669 DISP2A7MBM2 1401 aa11.21□□□□□ -0.61
PABPC4-220ENST00000525669 CCDC136Q96JN2 1154 aa11.21□□□□□ -0.61
PABPC4-220ENST00000525669 CCDC9Q9Y3X0 531 aaKnown RBP11.21□□□□□ -0.61
PABPC4-220ENST00000525669 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.62
PABPC4-220ENST00000525669 TRIM27P14373 513 aa11.2□□□□□ -0.62
PABPC4-220ENST00000525669 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
PABPC4-220ENST00000525669 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
PABPC4-220ENST00000525669 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
PABPC4-220ENST00000525669 NFATC2IPQ8NCF5 419 aa11.2□□□□□ -0.62
PABPC4-220ENST00000525669 DCAF5Q96JK2 942 aa11.2□□□□□ -0.62
PABPC4-220ENST00000525669 SLC52A2Q9HAB3 445 aa11.2□□□□□ -0.62
PABPC4-220ENST00000525669 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
PABPC4-220ENST00000525669 PLEKHG2Q9H7P9 1386 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 UBR2Q8IWV8 1755 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 KIF16BQ96L93 1317 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 ATF7IPQ6VMQ6 1270 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 DZIP1LQ8IYY4 767 aaKnown RBP11.19□□□□□ -0.62
PABPC4-220ENST00000525669 ZNF428Q96B54 188 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 NGLY1Q96IV0 654 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
PABPC4-220ENST00000525669 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
PABPC4-220ENST00000525669 SPATA31A6Q5VVP1 1343 aa11.18□□□□□ -0.62
PABPC4-220ENST00000525669 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
PABPC4-220ENST00000525669 HSP90AB1P08238 724 aaKnown RBP11.18□□□□□ -0.62
PABPC4-220ENST00000525669 CABP4P57796 275 aa11.18□□□□□ -0.62
PABPC4-220ENST00000525669 FTSJ3Q8IY81 847 aaKnown RBP11.18□□□□□ -0.62
PABPC4-220ENST00000525669 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
PABPC4-220ENST00000525669 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
PABPC4-220ENST00000525669 SPATA31A5Q5VU36 1347 aa11.17□□□□□ -0.62
PABPC4-220ENST00000525669 SPATA31A7Q8IWB4 1347 aa11.17□□□□□ -0.62
PABPC4-220ENST00000525669 GLI3P10071 1580 aa11.17□□□□□ -0.62
PABPC4-220ENST00000525669 IPO8O15397 1037 aaKnown RBP11.17□□□□□ -0.62
PABPC4-220ENST00000525669 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
PABPC4-220ENST00000525669 EIF2S2P20042 333 aaKnown RBP11.17□□□□□ -0.62
PABPC4-220ENST00000525669 MEX3CQ5U5Q3 659 aaKnown RBP11.17□□□□□ -0.62
PABPC4-220ENST00000525669 G2E3Q7L622 706 aa11.17□□□□□ -0.62
PABPC4-220ENST00000525669 TMEM57Q8N5G2 664 aa11.17□□□□□ -0.62
PABPC4-220ENST00000525669 BRPF1P55201 1214 aaPredicted RBP11.16□□□□□ -0.62
PABPC4-220ENST00000525669 MVPQ14764 893 aaKnown RBP11.16□□□□□ -0.62
PABPC4-220ENST00000525669 UNC5CLQ8IV45 518 aa11.16□□□□□ -0.62
PABPC4-220ENST00000525669 ITPRIPQ8IWB1 547 aa11.16□□□□□ -0.62
PABPC4-220ENST00000525669 N4BP2Q86UW6 1770 aaPredicted RBP11.16□□□□□ -0.62
PABPC4-220ENST00000525669 EXOC5O00471 708 aa11.15□□□□□ -0.62
PABPC4-220ENST00000525669 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
PABPC4-220ENST00000525669 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.62
PABPC4-220ENST00000525669 CCDC30Q5VVM6 783 aa11.15□□□□□ -0.62
PABPC4-220ENST00000525669 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
PABPC4-220ENST00000525669 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
PABPC4-220ENST00000525669 RGS12O14924 1447 aa11.15□□□□□ -0.62
PABPC4-220ENST00000525669 TNS2Q63HR2 1409 aa11.15□□□□□ -0.62
PABPC4-220ENST00000525669 ANXA1P04083 346 aa11.14□□□□□ -0.63
PABPC4-220ENST00000525669 MS4A1P11836 297 aa11.14□□□□□ -0.63
PABPC4-220ENST00000525669 ARHGAP45Q92619 1136 aa11.14□□□□□ -0.63
PABPC4-220ENST00000525669 USP21Q9UK80 565 aa11.14□□□□□ -0.63
PABPC4-220ENST00000525669 HEG1Q9ULI3 1381 aa11.14□□□□□ -0.63
PABPC4-220ENST00000525669 KCPQ6ZWJ8 1503 aa11.14□□□□□ -0.63
PABPC4-220ENST00000525669 ABCC4O15439 1325 aa11.13□□□□□ -0.63
PABPC4-220ENST00000525669 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
PABPC4-220ENST00000525669 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
PABPC4-220ENST00000525669 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
PABPC4-220ENST00000525669 TTC5Q8N0Z6 440 aa11.13□□□□□ -0.63
PABPC4-220ENST00000525669 ZNF496Q96IT1 587 aaPredicted RBP11.13□□□□□ -0.63
PABPC4-220ENST00000525669 API5Q9BZZ5 524 aaKnown RBP11.13□□□□□ -0.63
PABPC4-220ENST00000525669 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
PABPC4-220ENST00000525669 CHPF2Q9P2E5 772 aa11.13□□□□□ -0.63
PABPC4-220ENST00000525669 THRAP3Q9Y2W1 955 aaKnown RBP11.13□□□□□ -0.63
PABPC4-220ENST00000525669 AFF2P51816 1311 aa11.12□□□□□ -0.63
PABPC4-220ENST00000525669 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
PABPC4-220ENST00000525669 KAT6BQ8WYB5 2073 aa11.12□□□□□ -0.63
PABPC4-220ENST00000525669 THSD7AQ9UPZ6 1657 aa11.12□□□□□ -0.63
PABPC4-220ENST00000525669 F6X3S4 739 aa11.12□□□□□ -0.63
PABPC4-220ENST00000525669 VPS72Q15906 364 aa11.12□□□□□ -0.63
PABPC4-220ENST00000525669 DDB1Q16531 1140 aa11.12□□□□□ -0.63
PABPC4-220ENST00000525669 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
PABPC4-220ENST00000525669 A0A0G2JS52 829 aa11.11□□□□□ -0.63
PABPC4-220ENST00000525669 MYT1Q01538 1121 aa11.11□□□□□ -0.63
PABPC4-220ENST00000525669 PROSER3Q2NL68 480 aa11.11□□□□□ -0.63
PABPC4-220ENST00000525669 BARGINQ6ZT62 677 aa11.11□□□□□ -0.63
PABPC4-220ENST00000525669 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
PABPC4-220ENST00000525669 TMOD3Q9NYL9 352 aa11.11□□□□□ -0.63
PABPC4-220ENST00000525669 PTPRCP08575 1304 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 TJP1Q07157 1748 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
PABPC4-220ENST00000525669 IGHDP01880 384 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms