RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MRC1P22897 1456 aa7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 PTCD1O75127 700 aaKnown RBP7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 ATP6V1AP38606 617 aa7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 SLC15A2Q16348 729 aa7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 PROM2Q8N271 834 aa7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 RUNDC1Q96C34 613 aa7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 LGR6Q9HBX8 967 aa7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 ANO8Q9HCE9 1232 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 ATG3Q9NT62 314 aa7.11□□□□□ -1.27
HMGB1P40-201ENST00000525121 MSH5O43196 834 aa7.1□□□□□ -1.27
HMGB1P40-201ENST00000525121 KCNQ4P56696 695 aa7.1□□□□□ -1.27
HMGB1P40-201ENST00000525121 CCDC146Q8IYE0 955 aa7.1□□□□□ -1.27
HMGB1P40-201ENST00000525121 FLAD1Q8NFF5 587 aa7.1□□□□□ -1.27
HMGB1P40-201ENST00000525121 PNISRQ8TF01 805 aaKnown RBP7.1□□□□□ -1.27
HMGB1P40-201ENST00000525121 PLEKHF1Q96S99 279 aa7.1□□□□□ -1.27
HMGB1P40-201ENST00000525121 LRRC4BQ9NT99 713 aa7.1□□□□□ -1.27
HMGB1P40-201ENST00000525121 CEMIPQ8WUJ3 1361 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 ITGB4P16144 1822 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 BTBD11A6QL63 1104 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 RIPK4P57078 832 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 MCM10Q7L590 875 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 IL17REQ8NFR9 667 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 FMNL2Q96PY5 1086 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 SPON1Q9HCB6 807 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 ADAMTS8Q9UP79 889 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 LY75O60449 1722 aa7.09□□□□□ -1.27
HMGB1P40-201ENST00000525121 PAPPAQ13219 1627 aa7.09□□□□□ -1.28
HMGB1P40-201ENST00000525121 KAT6BQ8WYB5 2073 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 SCN11AQ9UI33 1791 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 GNPATO15228 680 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 STARD3NLO95772 234 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 TMPOP42166 694 aaKnown RBP7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 CALD1Q05682 793 aaKnown RBP7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 SLC39A6Q13433 755 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 TAF7Q15545 349 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 NEUROD2Q15784 382 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 ZNF827Q17R98 1081 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 ZNF790Q6PG37 636 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 NPM2Q86SE8 214 aaKnown RBP7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 AKT1S1Q96B36 256 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 TEX13AQ9BXU3 409 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 PPP1R1BQ9UD71 204 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 C5P01031 1676 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 ADAMTS7Q9UKP4 1686 aa7.08□□□□□ -1.28
HMGB1P40-201ENST00000525121 CNTNAP4Q9C0A0 1308 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 PHF14O94880 888 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 SSFA2P28290 1259 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 ITPK1Q13572 414 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 DCTN1Q14203 1278 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 VSIG10Q8N0Z9 540 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 LINC00116Q8NCU8 138 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 SLC16A10Q8TF71 515 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 MTFR1LQ9H019 292 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 RRP7AQ9Y3A4 280 aaKnown RBP7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 RTCBQ9Y3I0 505 aaKnown RBP7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 C4BP0C0L5 1744 aa7.07□□□□□ -1.28
HMGB1P40-201ENST00000525121 PNPLA7Q6ZV29 1317 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 APAF1O14727 1248 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 ZBTB7AO95365 584 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 ADRA2BP18089 450 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 POLD1P28340 1107 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 RC3H1Q5TC82 1133 aaKnown RBP7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 DIEXFQ68CQ4 756 aaKnown RBP7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 CCDC87Q9NVE4 849 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 TSPYL4Q9UJ04 414 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 HEG1Q9ULI3 1381 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 KCPQ6ZWJ8 1503 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 ZNF831Q5JPB2 1677 aa7.06□□□□□ -1.28
HMGB1P40-201ENST00000525121 SNRPA1P09661 255 aaKnown RBP7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 RFC4P35249 363 aa7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 CRKLP46109 303 aaKnown RBP7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 CCDC184Q52MB2 194 aa7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 TRAPPC3LQ5T215 181 aa7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 DNAJC10Q8IXB1 793 aa7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 FAM9BQ8IZU0 186 aa7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 ZNF496Q96IT1 587 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 THUMPD2Q9BTF0 503 aaKnown RBP7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 BABAM1Q9NWV8 329 aa7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 LAS1LQ9Y4W2 734 aaKnown RBP7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 LRP5O75197 1615 aa7.05□□□□□ -1.28
HMGB1P40-201ENST00000525121 A0A087WZG4 1122 aa7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 CCER2I3L3R5 266 aa7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 RPS6KA4O75676 772 aa7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 CYP19A1P11511 503 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 COL23A1Q86Y22 540 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 NGEFQ8N5V2 710 aa7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 SLC4A9Q96Q91 983 aa7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 ATF5Q9Y2D1 282 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 ZNF330Q9Y3S2 320 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 CICQ96RK0 1608 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P40-201ENST00000525121 CASZ1Q86V15 1759 aa7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 ZPR1O75312 459 aa7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 CANXP27824 592 aaKnown RBP7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 PDGFDQ9GZP0 370 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 MIS18AQ9NYP9 233 aa7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 TJP1Q07157 1748 aa7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 QSER1Q2KHR3 1735 aa7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 SIPA1L3O60292 1781 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P40-201ENST00000525121 UBR2Q8IWV8 1755 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms