RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 SLC39A6Q13433 755 aa20.55■□□□□ 0.88
RB1-205ENST00000525036 ATG3Q9NT62 314 aa20.55■□□□□ 0.88
RB1-205ENST00000525036 BTAF1O14981 1849 aa20.54■□□□□ 0.88
RB1-205ENST00000525036 MRC1P22897 1456 aa20.54■□□□□ 0.88
RB1-205ENST00000525036 VIRMAQ69YN4 1812 aaKnown RBP20.54■□□□□ 0.88
RB1-205ENST00000525036 KCNQ3O43525 872 aa20.54■□□□□ 0.88
RB1-205ENST00000525036 KCNQ4P56696 695 aa20.53■□□□□ 0.88
RB1-205ENST00000525036 TEFQ10587 303 aa20.53■□□□□ 0.88
RB1-205ENST00000525036 PROM2Q8N271 834 aa20.53■□□□□ 0.88
RB1-205ENST00000525036 CCDC125Q86Z20 511 aa20.52■□□□□ 0.88
RB1-205ENST00000525036 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
RB1-205ENST00000525036 EZH2Q15910 746 aaKnown RBP20.51■□□□□ 0.87
RB1-205ENST00000525036 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
RB1-205ENST00000525036 CAMKK2Q96RR4 588 aa20.51■□□□□ 0.87
RB1-205ENST00000525036 SOCS7O14512 581 aa20.5■□□□□ 0.87
RB1-205ENST00000525036 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
RB1-205ENST00000525036 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
RB1-205ENST00000525036 SIPA1L3O60292 1781 aaPredicted RBP20.49■□□□□ 0.87
RB1-205ENST00000525036 BTBD11A6QL63 1104 aa20.49■□□□□ 0.87
RB1-205ENST00000525036 PLSCR1O15162 318 aa20.49■□□□□ 0.87
RB1-205ENST00000525036 CCDC27Q2M243 656 aa20.49■□□□□ 0.87
RB1-205ENST00000525036 SLC4A9Q96Q91 983 aa20.49■□□□□ 0.87
RB1-205ENST00000525036 PALLDQ8WX93 1383 aa20.48■□□□□ 0.87
RB1-205ENST00000525036 BAG6P46379 1132 aa20.48■□□□□ 0.87
RB1-205ENST00000525036 LRRC4BQ9NT99 713 aa20.48■□□□□ 0.87
RB1-205ENST00000525036 PTCD1O75127 700 aaKnown RBP20.47■□□□□ 0.87
RB1-205ENST00000525036 TXNRD1Q16881 649 aa20.47■□□□□ 0.87
RB1-205ENST00000525036 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
RB1-205ENST00000525036 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
RB1-205ENST00000525036 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
RB1-205ENST00000525036 SMARCC1Q92922 1105 aaPredicted RBP20.45■□□□□ 0.86
RB1-205ENST00000525036 RBM42Q9BTD8 480 aaKnown RBP20.45■□□□□ 0.86
RB1-205ENST00000525036 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
RB1-205ENST00000525036 ZNF521Q96K83 1311 aa20.45■□□□□ 0.86
RB1-205ENST00000525036 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
RB1-205ENST00000525036 PAPPAQ13219 1627 aa20.44■□□□□ 0.86
RB1-205ENST00000525036 CHL1O00533 1208 aa20.43■□□□□ 0.86
RB1-205ENST00000525036 ZNF853P0CG23 659 aa20.43■□□□□ 0.86
RB1-205ENST00000525036 ITPK1Q13572 414 aa20.43■□□□□ 0.86
RB1-205ENST00000525036 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
RB1-205ENST00000525036 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
RB1-205ENST00000525036 SIK1P57059 783 aa20.43■□□□□ 0.86
RB1-205ENST00000525036 HNRNPUQ00839 825 aaKnown RBP eCLIP20.43■□□□□ 0.86
RB1-205ENST00000525036 TSPYL4Q9UJ04 414 aa20.43■□□□□ 0.86
RB1-205ENST00000525036 PRAMEF22A3QJZ6 481 aa20.42■□□□□ 0.86
RB1-205ENST00000525036 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
RB1-205ENST00000525036 KRT24Q2M2I5 525 aa20.41■□□□□ 0.86
RB1-205ENST00000525036 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
RB1-205ENST00000525036 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
RB1-205ENST00000525036 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
RB1-205ENST00000525036 LY75O60449 1722 aa20.41■□□□□ 0.86
RB1-205ENST00000525036 ATP6V1AP38606 617 aa20.4■□□□□ 0.86
RB1-205ENST00000525036 EIF4A1P60842 406 aaKnown RBP20.4■□□□□ 0.86
RB1-205ENST00000525036 TSR2Q969E8 191 aaKnown RBP20.4■□□□□ 0.86
RB1-205ENST00000525036 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
RB1-205ENST00000525036 LINC00116Q8NCU8 138 aa20.39■□□□□ 0.85
RB1-205ENST00000525036 IFT57Q9NWB7 429 aa20.39■□□□□ 0.85
RB1-205ENST00000525036 KDM3BQ7LBC6 1761 aa20.38■□□□□ 0.85
RB1-205ENST00000525036 DNAJC10Q8IXB1 793 aa20.38■□□□□ 0.85
RB1-205ENST00000525036 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
RB1-205ENST00000525036 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
RB1-205ENST00000525036 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
RB1-205ENST00000525036 GNAI1P63096 354 aa20.37■□□□□ 0.85
RB1-205ENST00000525036 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
RB1-205ENST00000525036 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
RB1-205ENST00000525036 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
RB1-205ENST00000525036 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
RB1-205ENST00000525036 ANO8Q9HCE9 1232 aaPredicted RBP20.37■□□□□ 0.85
RB1-205ENST00000525036 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
RB1-205ENST00000525036 IL16Q14005 1332 aa20.36■□□□□ 0.85
RB1-205ENST00000525036 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
RB1-205ENST00000525036 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
RB1-205ENST00000525036 HEG1Q9ULI3 1381 aa20.36■□□□□ 0.85
RB1-205ENST00000525036 RREB1Q92766 1687 aa20.36■□□□□ 0.85
RB1-205ENST00000525036 ZNF827Q17R98 1081 aa20.35■□□□□ 0.85
RB1-205ENST00000525036 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
RB1-205ENST00000525036 TJP1Q07157 1748 aa20.34■□□□□ 0.85
RB1-205ENST00000525036 NUP188Q5SRE5 1749 aa20.34■□□□□ 0.85
RB1-205ENST00000525036 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.85
RB1-205ENST00000525036 GOLGA2Q08379 1002 aa20.33■□□□□ 0.85
RB1-205ENST00000525036 AMIGO3Q86WK7 504 aa20.33■□□□□ 0.85
RB1-205ENST00000525036 C8orf58Q8NAV2 365 aa20.33■□□□□ 0.85
RB1-205ENST00000525036 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.85
RB1-205ENST00000525036 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.84
RB1-205ENST00000525036 ELL2O00472 640 aaPredicted RBP20.32■□□□□ 0.84
RB1-205ENST00000525036 CYP19A1P11511 503 aaPredicted RBP20.32■□□□□ 0.84
RB1-205ENST00000525036 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
RB1-205ENST00000525036 SNRPA1P09661 255 aaKnown RBP20.31■□□□□ 0.84
RB1-205ENST00000525036 SLFN5Q08AF3 891 aa20.31■□□□□ 0.84
RB1-205ENST00000525036 TSPYL6Q8N831 410 aa20.31■□□□□ 0.84
RB1-205ENST00000525036 AKT1S1Q96B36 256 aa20.31■□□□□ 0.84
RB1-205ENST00000525036 INTS5Q6P9B9 1019 aaKnown RBP20.3■□□□□ 0.84
RB1-205ENST00000525036 A1BGP04217 495 aa20.3■□□□□ 0.84
RB1-205ENST00000525036 CRKLP46109 303 aaKnown RBP20.3■□□□□ 0.84
RB1-205ENST00000525036 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
RB1-205ENST00000525036 C5P01031 1676 aa20.29■□□□□ 0.84
RB1-205ENST00000525036 EXOSC9Q06265 439 aaKnown RBP20.29■□□□□ 0.84
RB1-205ENST00000525036 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
RB1-205ENST00000525036 ZNF831Q5JPB2 1677 aa20.29■□□□□ 0.84
RB1-205ENST00000525036 TAF1LQ8IZX4 1826 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms