RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 ITGB4P16144 1822 aa15.06■□□□□ 0
CSTF3-205ENST00000524775 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
CSTF3-205ENST00000524775 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
CSTF3-205ENST00000524775 EIF4A1P60842 406 aaKnown RBP15.06■□□□□ 0
CSTF3-205ENST00000524775 IFNL2Q8IZJ0 200 aa15.06■□□□□ 0
CSTF3-205ENST00000524775 STRN4Q9NRL3 753 aa15.06■□□□□ 0
CSTF3-205ENST00000524775 C5P01031 1676 aa15.06■□□□□ 0
CSTF3-205ENST00000524775 MS4A1P11836 297 aa15.05■□□□□ -0
CSTF3-205ENST00000524775 EVA1CP58658 441 aa15.05■□□□□ -0
CSTF3-205ENST00000524775 MVPQ14764 893 aaKnown RBP15.05■□□□□ -0
CSTF3-205ENST00000524775 NKX1-1Q15270 411 aaPredicted RBP15.05■□□□□ -0
CSTF3-205ENST00000524775 CLUAP1Q96AJ1 413 aa15.05■□□□□ -0
CSTF3-205ENST00000524775 KDM2BQ8NHM5 1336 aa15.05■□□□□ -0
CSTF3-205ENST00000524775 PAPPAQ13219 1627 aa15.05■□□□□ -0
CSTF3-205ENST00000524775 UBR2Q8IWV8 1755 aa15.05■□□□□ -0
CSTF3-205ENST00000524775 GLI3P10071 1580 aa15.04■□□□□ -0
CSTF3-205ENST00000524775 SLIT2O94813 1529 aa15.04■□□□□ -0
CSTF3-205ENST00000524775 ABCC4O15439 1325 aa15.04■□□□□ -0
CSTF3-205ENST00000524775 IL2RBP14784 551 aa15.04■□□□□ -0
CSTF3-205ENST00000524775 ZCRB1Q8TBF4 217 aaKnown RBP15.04■□□□□ -0
CSTF3-205ENST00000524775 FBXO41Q8TF61 875 aa15.04■□□□□ -0
CSTF3-205ENST00000524775 TEFQ10587 303 aa15.03■□□□□ -0
CSTF3-205ENST00000524775 AAMPQ13685 434 aa15.03■□□□□ -0
CSTF3-205ENST00000524775 TMEM57Q8N5G2 664 aa15.03■□□□□ -0
CSTF3-205ENST00000524775 SLC52A2Q9HAB3 445 aa15.03■□□□□ -0
CSTF3-205ENST00000524775 BTBD11A6QL63 1104 aa15.02■□□□□ -0
CSTF3-205ENST00000524775 G2E3Q7L622 706 aa15.02■□□□□ -0
CSTF3-205ENST00000524775 DCAF5Q96JK2 942 aa15.02■□□□□ -0
CSTF3-205ENST00000524775 HOXB7P09629 217 aa15.01□□□□□ -0.01
CSTF3-205ENST00000524775 PCDHB15Q9Y5E8 787 aa15.01□□□□□ -0.01
CSTF3-205ENST00000524775 JCADQ9P266 1359 aa15□□□□□ -0.01
CSTF3-205ENST00000524775 PCDH11XQ9BZA7 1347 aa15□□□□□ -0.01
CSTF3-205ENST00000524775 PCDH11YQ9BZA8 1340 aa15□□□□□ -0.01
CSTF3-205ENST00000524775 HSP90AB1P08238 724 aaKnown RBP15□□□□□ -0.01
CSTF3-205ENST00000524775 API5Q9BZZ5 524 aaKnown RBP15□□□□□ -0.01
CSTF3-205ENST00000524775 LAMB4A4D0S4 1761 aa14.99□□□□□ -0.01
CSTF3-205ENST00000524775 ADAMTS2O95450 1211 aa14.99□□□□□ -0.01
CSTF3-205ENST00000524775 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
CSTF3-205ENST00000524775 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
CSTF3-205ENST00000524775 NFATC2IPQ8NCF5 419 aa14.99□□□□□ -0.01
CSTF3-205ENST00000524775 ZBTB40Q9NUA8 1239 aa14.99□□□□□ -0.01
CSTF3-205ENST00000524775 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
CSTF3-205ENST00000524775 PTPRCP08575 1304 aa14.98□□□□□ -0.01
CSTF3-205ENST00000524775 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
CSTF3-205ENST00000524775 GIGYF1O75420 1035 aaPredicted RBP14.98□□□□□ -0.01
CSTF3-205ENST00000524775 IGHDP01880 384 aa14.98□□□□□ -0.01
CSTF3-205ENST00000524775 CCDC30Q5VVM6 783 aa14.98□□□□□ -0.01
CSTF3-205ENST00000524775 INTS3Q68E01 1043 aaKnown RBP14.98□□□□□ -0.01
CSTF3-205ENST00000524775 DDX19BQ9UMR2 479 aa14.98□□□□□ -0.01
CSTF3-205ENST00000524775 LRP6O75581 1613 aa14.98□□□□□ -0.01
CSTF3-205ENST00000524775 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
CSTF3-205ENST00000524775 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
CSTF3-205ENST00000524775 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
CSTF3-205ENST00000524775 ERVV-2B6SEH9 535 aa14.97□□□□□ -0.01
CSTF3-205ENST00000524775 ZBTB7BO15156 539 aaPredicted RBP14.97□□□□□ -0.01
CSTF3-205ENST00000524775 NUTM2AQ8IVF1 878 aaPredicted RBP14.97□□□□□ -0.01
CSTF3-205ENST00000524775 SLC39A6Q13433 755 aa14.96□□□□□ -0.01
CSTF3-205ENST00000524775 ZNF790Q6PG37 636 aa14.96□□□□□ -0.01
CSTF3-205ENST00000524775 CENPQQ7L2Z9 268 aaPredicted RBP14.96□□□□□ -0.01
CSTF3-205ENST00000524775 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
CSTF3-205ENST00000524775 SPATA31A5Q5VU36 1347 aa14.95□□□□□ -0.02
CSTF3-205ENST00000524775 SPATA31A7Q8IWB4 1347 aa14.95□□□□□ -0.02
CSTF3-205ENST00000524775 PRAMEF22A3QJZ6 481 aa14.95□□□□□ -0.02
CSTF3-205ENST00000524775 ITPRIPQ8IWB1 547 aa14.95□□□□□ -0.02
CSTF3-205ENST00000524775 USP35Q9P2H5 1018 aa14.95□□□□□ -0.02
CSTF3-205ENST00000524775 KCPQ6ZWJ8 1503 aa14.95□□□□□ -0.02
CSTF3-205ENST00000524775 HDGFL1Q5TGJ6 251 aa14.94□□□□□ -0.02
CSTF3-205ENST00000524775 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
CSTF3-205ENST00000524775 THRAP3Q9Y2W1 955 aaKnown RBP14.94□□□□□ -0.02
CSTF3-205ENST00000524775 TNS2Q63HR2 1409 aa14.93□□□□□ -0.02
CSTF3-205ENST00000524775 DOT1LQ8TEK3 1739 aa14.93□□□□□ -0.02
CSTF3-205ENST00000524775 CABP4P57796 275 aa14.93□□□□□ -0.02
CSTF3-205ENST00000524775 FLIIQ13045 1269 aa14.93□□□□□ -0.02
CSTF3-205ENST00000524775 DDX54Q8TDD1 881 aaKnown RBP14.93□□□□□ -0.02
CSTF3-205ENST00000524775 ZNF496Q96IT1 587 aaPredicted RBP14.93□□□□□ -0.02
CSTF3-205ENST00000524775 STK31Q9BXU1 1019 aa14.93□□□□□ -0.02
CSTF3-205ENST00000524775 SPATA31A6Q5VVP1 1343 aa14.92□□□□□ -0.02
CSTF3-205ENST00000524775 HSPA1LP34931 641 aa14.92□□□□□ -0.02
CSTF3-205ENST00000524775 PDIA6Q15084 440 aa14.92□□□□□ -0.02
CSTF3-205ENST00000524775 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
CSTF3-205ENST00000524775 FNBP4Q8N3X1 1017 aaPredicted RBP14.92□□□□□ -0.02
CSTF3-205ENST00000524775 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
CSTF3-205ENST00000524775 PXDNLA1KZ92 1463 aa14.91□□□□□ -0.02
CSTF3-205ENST00000524775 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
CSTF3-205ENST00000524775 HDAC1Q13547 482 aaPredicted RBP14.91□□□□□ -0.02
CSTF3-205ENST00000524775 BARGINQ6ZT62 677 aa14.91□□□□□ -0.02
CSTF3-205ENST00000524775 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
CSTF3-205ENST00000524775 CDCA7Q9BWT1 371 aaPredicted RBP14.91□□□□□ -0.02
CSTF3-205ENST00000524775 TSHZ2Q9NRE2 1034 aa14.91□□□□□ -0.02
CSTF3-205ENST00000524775 CHPF2Q9P2E5 772 aa14.91□□□□□ -0.02
CSTF3-205ENST00000524775 F6X3S4 739 aa14.9□□□□□ -0.02
CSTF3-205ENST00000524775 PROSER3Q2NL68 480 aa14.9□□□□□ -0.02
CSTF3-205ENST00000524775 SKAP1Q86WV1 359 aa14.9□□□□□ -0.02
CSTF3-205ENST00000524775 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
CSTF3-205ENST00000524775 EXOC5O00471 708 aa14.89□□□□□ -0.03
CSTF3-205ENST00000524775 VPS72Q15906 364 aa14.89□□□□□ -0.03
CSTF3-205ENST00000524775 LRP10Q7Z4F1 713 aa14.89□□□□□ -0.03
CSTF3-205ENST00000524775 ADCY9O60503 1353 aa14.88□□□□□ -0.03
CSTF3-205ENST00000524775 THSD7AQ9UPZ6 1657 aa14.88□□□□□ -0.03
CSTF3-205ENST00000524775 ANXA1P04083 346 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms