RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 RGPD2P0DJD1 1756 aa11.96□□□□□ -0.49
CASC9-204ENST00000523313 LOC102724428A0A0B4J2F2 783 aa11.95□□□□□ -0.5
CASC9-204ENST00000523313 GLTPD2A6NH11 291 aa11.95□□□□□ -0.5
CASC9-204ENST00000523313 CCDC85CA6NKD9 419 aa11.95□□□□□ -0.5
CASC9-204ENST00000523313 HOXC9P31274 260 aa11.95□□□□□ -0.5
CASC9-204ENST00000523313 RGS19P49795 217 aa11.95□□□□□ -0.5
CASC9-204ENST00000523313 SIK1P57059 783 aa11.95□□□□□ -0.5
CASC9-204ENST00000523313 CNTNAP1P78357 1384 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 POTECB2RU33 542 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 FBLN1P23142 703 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 TMF1P82094 1093 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 NLGN1Q8N2Q7 840 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 PIGBQ92521 554 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 CD163L1Q9NR16 1453 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
CASC9-204ENST00000523313 RAB3GAP2Q9H2M9 1393 aa11.93□□□□□ -0.5
CASC9-204ENST00000523313 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
CASC9-204ENST00000523313 MAP3K19Q56UN5 1328 aa11.93□□□□□ -0.5
CASC9-204ENST00000523313 CHRNA5P30532 468 aa11.93□□□□□ -0.5
CASC9-204ENST00000523313 SBF1O95248 1867 aa11.93□□□□□ -0.5
CASC9-204ENST00000523313 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
CASC9-204ENST00000523313 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
CASC9-204ENST00000523313 ZC3H4Q9UPT8 1303 aaKnown RBP11.92□□□□□ -0.5
CASC9-204ENST00000523313 CYP27B1O15528 508 aa11.92□□□□□ -0.5
CASC9-204ENST00000523313 HSPA8P11142 646 aaKnown RBP11.92□□□□□ -0.5
CASC9-204ENST00000523313 VEGFBP49765 207 aa11.92□□□□□ -0.5
CASC9-204ENST00000523313 RAPGEF4Q8WZA2 1011 aa11.92□□□□□ -0.5
CASC9-204ENST00000523313 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
CASC9-204ENST00000523313 PARP3Q9Y6F1 533 aa11.92□□□□□ -0.5
CASC9-204ENST00000523313 KDM6AO15550 1401 aaPredicted RBP11.92□□□□□ -0.5
CASC9-204ENST00000523313 CGNL1Q0VF96 1302 aa11.91□□□□□ -0.5
CASC9-204ENST00000523313 GYS1P13807 737 aa11.91□□□□□ -0.5
CASC9-204ENST00000523313 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
CASC9-204ENST00000523313 AMPHP49418 695 aa11.91□□□□□ -0.5
CASC9-204ENST00000523313 TRAPPC3LQ5T215 181 aa11.91□□□□□ -0.5
CASC9-204ENST00000523313 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
CASC9-204ENST00000523313 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
CASC9-204ENST00000523313 LMNB1P20700 586 aa11.9□□□□□ -0.5
CASC9-204ENST00000523313 ATP6V1AP38606 617 aa11.9□□□□□ -0.5
CASC9-204ENST00000523313 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
CASC9-204ENST00000523313 ASAP1Q9ULH1 1129 aa11.9□□□□□ -0.5
CASC9-204ENST00000523313 RTCBQ9Y3I0 505 aaKnown RBP11.9□□□□□ -0.5
CASC9-204ENST00000523313 ITGB4P16144 1822 aa11.9□□□□□ -0.5
CASC9-204ENST00000523313 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
CASC9-204ENST00000523313 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
CASC9-204ENST00000523313 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
CASC9-204ENST00000523313 DDR1Q08345 913 aa11.87□□□□□ -0.51
CASC9-204ENST00000523313 HDGFL2Q7Z4V5 671 aaPredicted RBP11.87□□□□□ -0.51
CASC9-204ENST00000523313 SLC12A5Q9H2X9 1139 aa11.87□□□□□ -0.51
CASC9-204ENST00000523313 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
CASC9-204ENST00000523313 RFC4P35249 363 aa11.86□□□□□ -0.51
CASC9-204ENST00000523313 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
CASC9-204ENST00000523313 A0A1W2PP64 1363 aa11.85□□□□□ -0.51
CASC9-204ENST00000523313 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
CASC9-204ENST00000523313 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
CASC9-204ENST00000523313 ATG3Q9NT62 314 aa11.85□□□□□ -0.51
CASC9-204ENST00000523313 TMOD3Q9NYL9 352 aa11.85□□□□□ -0.51
CASC9-204ENST00000523313 PASKQ96RG2 1323 aa11.85□□□□□ -0.51
CASC9-204ENST00000523313 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
CASC9-204ENST00000523313 NFKBIEO00221 500 aa11.84□□□□□ -0.51
CASC9-204ENST00000523313 FKBP8Q14318 412 aa11.84□□□□□ -0.51
CASC9-204ENST00000523313 SRP68Q9UHB9 627 aaKnown RBP11.84□□□□□ -0.51
CASC9-204ENST00000523313 KDRP35968 1356 aa11.83□□□□□ -0.52
CASC9-204ENST00000523313 TMEM88BA6NKF7 163 aa11.83□□□□□ -0.52
CASC9-204ENST00000523313 RPS6KA4O75676 772 aa11.83□□□□□ -0.52
CASC9-204ENST00000523313 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
CASC9-204ENST00000523313 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
CASC9-204ENST00000523313 COG3Q96JB2 828 aa11.83□□□□□ -0.52
CASC9-204ENST00000523313 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
CASC9-204ENST00000523313 TNRC18O15417 2968 aaPredicted RBP11.82□□□□□ -0.52
CASC9-204ENST00000523313 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
CASC9-204ENST00000523313 SMG6Q86US8 1419 aaKnown RBP11.82□□□□□ -0.52
CASC9-204ENST00000523313 POLRMTO00411 1230 aaKnown RBP11.81□□□□□ -0.52
CASC9-204ENST00000523313 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
CASC9-204ENST00000523313 TERF2IPQ9NYB0 399 aa11.81□□□□□ -0.52
CASC9-204ENST00000523313 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
CASC9-204ENST00000523313 DDNO94850 711 aaPredicted RBP11.8□□□□□ -0.52
CASC9-204ENST00000523313 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
CASC9-204ENST00000523313 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
CASC9-204ENST00000523313 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
CASC9-204ENST00000523313 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
CASC9-204ENST00000523313 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
CASC9-204ENST00000523313 RASSF10A6NK89 507 aa11.79□□□□□ -0.52
CASC9-204ENST00000523313 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
CASC9-204ENST00000523313 ERFEQ4G0M1 354 aa11.79□□□□□ -0.52
CASC9-204ENST00000523313 LDHDQ86WU2 507 aa11.79□□□□□ -0.52
CASC9-204ENST00000523313 TSKSQ9UJT2 592 aa11.79□□□□□ -0.52
CASC9-204ENST00000523313 USP42Q9H9J4 1324 aaKnown RBP11.79□□□□□ -0.52
CASC9-204ENST00000523313 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
CASC9-204ENST00000523313 CCDC88AQ3V6T2 1871 aa11.78□□□□□ -0.52
CASC9-204ENST00000523313 TM4SF1P30408 202 aa11.78□□□□□ -0.52
CASC9-204ENST00000523313 TTLL6Q8N841 843 aa11.78□□□□□ -0.52
CASC9-204ENST00000523313 MCOLN1Q9GZU1 580 aa11.78□□□□□ -0.52
CASC9-204ENST00000523313 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
CASC9-204ENST00000523313 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.52
CASC9-204ENST00000523313 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
CASC9-204ENST00000523313 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
CASC9-204ENST00000523313 INSRP06213 1382 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms