RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ZBTB7AO95365 584 aa21.9■■□□□ 1.1
PABPC1-221ENST00000522720 GAS2L2Q8NHY3 880 aa21.9■■□□□ 1.1
PABPC1-221ENST00000522720 PNPLA7Q6ZV29 1317 aa21.89■■□□□ 1.1
PABPC1-221ENST00000522720 PHACTR3Q96KR7 559 aa21.89■■□□□ 1.09
PABPC1-221ENST00000522720 VIRMAQ69YN4 1812 aaKnown RBP21.89■■□□□ 1.09
PABPC1-221ENST00000522720 TUBGCP6Q96RT7 1819 aa21.89■■□□□ 1.09
PABPC1-221ENST00000522720 MTFR1LQ9H019 292 aa21.88■■□□□ 1.09
PABPC1-221ENST00000522720 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
PABPC1-221ENST00000522720 ADAMTS7Q9UKP4 1686 aa21.88■■□□□ 1.09
PABPC1-221ENST00000522720 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
PABPC1-221ENST00000522720 ATF5Q9Y2D1 282 aaPredicted RBP21.87■■□□□ 1.09
PABPC1-221ENST00000522720 GNAT3A8MTJ3 354 aa21.86■■□□□ 1.09
PABPC1-221ENST00000522720 ITPK1Q13572 414 aa21.86■■□□□ 1.09
PABPC1-221ENST00000522720 SLC16A10Q8TF71 515 aa21.86■■□□□ 1.09
PABPC1-221ENST00000522720 RBM42Q9BTD8 480 aaKnown RBP21.86■■□□□ 1.09
PABPC1-221ENST00000522720 MAP3K5Q99683 1374 aa21.86■■□□□ 1.09
PABPC1-221ENST00000522720 MYBBP1AQ9BQG0 1328 aaKnown RBP21.85■■□□□ 1.09
PABPC1-221ENST00000522720 MRC1P22897 1456 aa21.85■■□□□ 1.09
PABPC1-221ENST00000522720 LINC00116Q8NCU8 138 aa21.85■■□□□ 1.09
PABPC1-221ENST00000522720 SLC4A9Q96Q91 983 aa21.85■■□□□ 1.09
PABPC1-221ENST00000522720 C4BP0C0L5 1744 aa21.85■■□□□ 1.09
PABPC1-221ENST00000522720 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
PABPC1-221ENST00000522720 PTGER2P43116 358 aa21.84■■□□□ 1.09
PABPC1-221ENST00000522720 IL17REQ8NFR9 667 aa21.84■■□□□ 1.09
PABPC1-221ENST00000522720 ZNF316A6NFI3 1004 aaPredicted RBP21.83■■□□□ 1.09
PABPC1-221ENST00000522720 COL23A1Q86Y22 540 aaPredicted RBP21.83■■□□□ 1.09
PABPC1-221ENST00000522720 AK7Q96M32 723 aa21.83■■□□□ 1.09
PABPC1-221ENST00000522720 PTCD1O75127 700 aaKnown RBP21.82■■□□□ 1.08
PABPC1-221ENST00000522720 FLAD1Q8NFF5 587 aa21.82■■□□□ 1.08
PABPC1-221ENST00000522720 SGIP1Q9BQI5 828 aa21.82■■□□□ 1.08
PABPC1-221ENST00000522720 PRKRIP1Q9H875 184 aaPredicted RBP21.82■■□□□ 1.08
PABPC1-221ENST00000522720 PPP1R1BQ9UD71 204 aaPredicted RBP21.82■■□□□ 1.08
PABPC1-221ENST00000522720 UBR3Q6ZT12 1888 aa21.8■■□□□ 1.08
PABPC1-221ENST00000522720 MSH5O43196 834 aa21.79■■□□□ 1.08
PABPC1-221ENST00000522720 PLEKHF1Q96S99 279 aa21.79■■□□□ 1.08
PABPC1-221ENST00000522720 PNNQ9H307 717 aaKnown RBP21.79■■□□□ 1.08
PABPC1-221ENST00000522720 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
PABPC1-221ENST00000522720 NEFMP07197 916 aa21.78■■□□□ 1.08
PABPC1-221ENST00000522720 TEFQ10587 303 aa21.78■■□□□ 1.08
PABPC1-221ENST00000522720 SLC39A6Q13433 755 aa21.78■■□□□ 1.08
PABPC1-221ENST00000522720 RC3H1Q5TC82 1133 aaKnown RBP21.78■■□□□ 1.08
PABPC1-221ENST00000522720 AMIGO3Q86WK7 504 aa21.78■■□□□ 1.08
PABPC1-221ENST00000522720 GNPATO15228 680 aa21.77■■□□□ 1.08
PABPC1-221ENST00000522720 SSFA2P28290 1259 aa21.77■■□□□ 1.08
PABPC1-221ENST00000522720 COL24A1Q17RW2 1714 aa21.77■■□□□ 1.08
PABPC1-221ENST00000522720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.76■■□□□ 1.07
PABPC1-221ENST00000522720 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
PABPC1-221ENST00000522720 COL5A3P25940 1745 aaPredicted RBP21.76■■□□□ 1.07
PABPC1-221ENST00000522720 SMIM5Q71RC9 77 aa21.76■■□□□ 1.07
PABPC1-221ENST00000522720 RTF1Q92541 710 aaKnown RBP21.76■■□□□ 1.07
PABPC1-221ENST00000522720 CNTNAP4Q9C0A0 1308 aa21.76■■□□□ 1.07
PABPC1-221ENST00000522720 SIPA1L3O60292 1781 aaPredicted RBP21.75■■□□□ 1.07
PABPC1-221ENST00000522720 ARXQ96QS3 562 aa21.75■■□□□ 1.07
PABPC1-221ENST00000522720 MYH14Q7Z406 1995 aaKnown RBP21.75■■□□□ 1.07
PABPC1-221ENST00000522720 PHF14O94880 888 aa21.74■■□□□ 1.07
PABPC1-221ENST00000522720 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-221ENST00000522720 POLD1P28340 1107 aa21.73■■□□□ 1.07
PABPC1-221ENST00000522720 MCM10Q7L590 875 aa21.73■■□□□ 1.07
PABPC1-221ENST00000522720 RTCBQ9Y3I0 505 aaKnown RBP21.73■■□□□ 1.07
PABPC1-221ENST00000522720 KCPQ6ZWJ8 1503 aa21.73■■□□□ 1.07
PABPC1-221ENST00000522720 TJP1Q07157 1748 aa21.72■■□□□ 1.07
PABPC1-221ENST00000522720 RPS6KA4O75676 772 aa21.72■■□□□ 1.07
PABPC1-221ENST00000522720 ZNF790Q6PG37 636 aa21.72■■□□□ 1.07
PABPC1-221ENST00000522720 TTC5Q8N0Z6 440 aa21.72■■□□□ 1.07
PABPC1-221ENST00000522720 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
PABPC1-221ENST00000522720 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
PABPC1-221ENST00000522720 DLG5Q8TDM6 1919 aa21.71■■□□□ 1.07
PABPC1-221ENST00000522720 CRKLP46109 303 aaKnown RBP21.71■■□□□ 1.07
PABPC1-221ENST00000522720 NFE2L2Q16236 605 aa21.71■■□□□ 1.07
PABPC1-221ENST00000522720 TRAPPC3LQ5T215 181 aa21.71■■□□□ 1.07
PABPC1-221ENST00000522720 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
PABPC1-221ENST00000522720 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
PABPC1-221ENST00000522720 ADRA2BP18089 450 aa21.7■■□□□ 1.06
PABPC1-221ENST00000522720 DCTN1Q14203 1278 aa21.7■■□□□ 1.06
PABPC1-221ENST00000522720 BTBD11A6QL63 1104 aa21.69■■□□□ 1.06
PABPC1-221ENST00000522720 MSL1Q68DK7 614 aa21.69■■□□□ 1.06
PABPC1-221ENST00000522720 ZNF496Q96IT1 587 aaPredicted RBP21.69■■□□□ 1.06
PABPC1-221ENST00000522720 FHDC1Q9C0D6 1143 aaPredicted RBP21.69■■□□□ 1.06
PABPC1-221ENST00000522720 CYP19A1P11511 503 aaPredicted RBP21.68■■□□□ 1.06
PABPC1-221ENST00000522720 WDR43Q15061 677 aaKnown RBP eCLIP21.68■■□□□ 1.06
PABPC1-221ENST00000522720 INTS5Q6P9B9 1019 aaKnown RBP21.68■■□□□ 1.06
PABPC1-221ENST00000522720 ARHGEF1Q92888 912 aaKnown RBP21.68■■□□□ 1.06
PABPC1-221ENST00000522720 SYT17Q9BSW7 474 aa21.67■■□□□ 1.06
PABPC1-221ENST00000522720 CCDC87Q9NVE4 849 aa21.66■■□□□ 1.06
PABPC1-221ENST00000522720 HEG1Q9ULI3 1381 aa21.65■■□□□ 1.06
PABPC1-221ENST00000522720 KCNQ3O43525 872 aa21.65■■□□□ 1.06
PABPC1-221ENST00000522720 TAF7Q15545 349 aaPredicted RBP21.65■■□□□ 1.06
PABPC1-221ENST00000522720 FMNL2Q96PY5 1086 aa21.65■■□□□ 1.06
PABPC1-221ENST00000522720 ADAMTS8Q9UP79 889 aa21.65■■□□□ 1.06
PABPC1-221ENST00000522720 STARD3NLO95772 234 aa21.64■■□□□ 1.05
PABPC1-221ENST00000522720 RFC4P35249 363 aa21.64■■□□□ 1.05
PABPC1-221ENST00000522720 TEX13AQ9BXU3 409 aaPredicted RBP21.64■■□□□ 1.05
PABPC1-221ENST00000522720 TMPOP42166 694 aaKnown RBP21.63■■□□□ 1.05
PABPC1-221ENST00000522720 RIPK4P57078 832 aa21.62■■□□□ 1.05
PABPC1-221ENST00000522720 CCDC146Q8IYE0 955 aa21.62■■□□□ 1.05
PABPC1-221ENST00000522720 RUNDC1Q96C34 613 aa21.62■■□□□ 1.05
PABPC1-221ENST00000522720 SOS1Q07889 1333 aaPredicted RBP21.61■■□□□ 1.05
PABPC1-221ENST00000522720 NLGN1Q8N2Q7 840 aa21.61■■□□□ 1.05
PABPC1-221ENST00000522720 ANP32CO43423 234 aa21.6■■□□□ 1.05
PABPC1-221ENST00000522720 GYS1P13807 737 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms