RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 KDRP35968 1356 aa35.13■■■■□ 3.21
LAPTM4B-203ENST00000521545 LINC00116Q8NCU8 138 aa35.12■■■■□ 3.21
LAPTM4B-203ENST00000521545 PHF14O94880 888 aa35.1■■■■□ 3.21
LAPTM4B-203ENST00000521545 CNGB1Q14028 1251 aaPredicted RBP35.1■■■■□ 3.21
LAPTM4B-203ENST00000521545 ITPK1Q13572 414 aa35.09■■■■□ 3.21
LAPTM4B-203ENST00000521545 NPC1L1Q9UHC9 1359 aa35.09■■■■□ 3.21
LAPTM4B-203ENST00000521545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.08■■■■□ 3.21
LAPTM4B-203ENST00000521545 DIAPH1O60610 1272 aaKnown RBP35.08■■■■□ 3.21
LAPTM4B-203ENST00000521545 RBM42Q9BTD8 480 aaKnown RBP35.08■■■■□ 3.21
LAPTM4B-203ENST00000521545 KDM6AO15550 1401 aaPredicted RBP35.07■■■■□ 3.21
LAPTM4B-203ENST00000521545 SSFA2P28290 1259 aa35.07■■■■□ 3.2
LAPTM4B-203ENST00000521545 GPR162Q16538 588 aa35.06■■■■□ 3.2
LAPTM4B-203ENST00000521545 GNPATO15228 680 aa35.05■■■■□ 3.2
LAPTM4B-203ENST00000521545 HMOX1P09601 288 aa35.04■■■■□ 3.2
LAPTM4B-203ENST00000521545 AMIGO3Q86WK7 504 aa35.04■■■■□ 3.2
LAPTM4B-203ENST00000521545 SMIM5Q71RC9 77 aa35.03■■■■□ 3.2
LAPTM4B-203ENST00000521545 UBR3Q6ZT12 1888 aa35.03■■■■□ 3.2
LAPTM4B-203ENST00000521545 AKAP4Q5JQC9 854 aa35.02■■■■□ 3.2
LAPTM4B-203ENST00000521545 NFATC2IPQ8NCF5 419 aa35.02■■■■□ 3.2
LAPTM4B-203ENST00000521545 PELP1Q8IZL8 1130 aaKnown RBP35■■■■□ 3.19
LAPTM4B-203ENST00000521545 NLGN2Q8NFZ4 835 aa35■■■■□ 3.19
LAPTM4B-203ENST00000521545 SLC4A9Q96Q91 983 aa34.98■■■■□ 3.19
LAPTM4B-203ENST00000521545 RTCBQ9Y3I0 505 aaKnown RBP34.97■■■■□ 3.19
LAPTM4B-203ENST00000521545 PTCD1O75127 700 aaKnown RBP34.96■■■■□ 3.19
LAPTM4B-203ENST00000521545 RC3H1Q5TC82 1133 aaKnown RBP34.96■■■■□ 3.19
LAPTM4B-203ENST00000521545 CD2APQ9Y5K6 639 aa34.95■■■■□ 3.19
LAPTM4B-203ENST00000521545 TRAPPC3LQ5T215 181 aa34.94■■■■□ 3.18
LAPTM4B-203ENST00000521545 ZNF831Q5JPB2 1677 aa34.94■■■■□ 3.18
LAPTM4B-203ENST00000521545 U2SURPO15042 1029 aaKnown RBP34.93■■■■□ 3.18
LAPTM4B-203ENST00000521545 MTHFSDQ2M296 383 aaKnown RBP34.91■■■■□ 3.18
LAPTM4B-203ENST00000521545 LGR6Q9HBX8 967 aa34.91■■■■□ 3.18
LAPTM4B-203ENST00000521545 SCN11AQ9UI33 1791 aa34.9■■■■□ 3.18
LAPTM4B-203ENST00000521545 CNTNAP4Q9C0A0 1308 aa34.9■■■■□ 3.18
LAPTM4B-203ENST00000521545 SLC52A2Q9HAB3 445 aa34.9■■■■□ 3.18
LAPTM4B-203ENST00000521545 RNMTO43148 476 aaKnown RBP34.89■■■■□ 3.18
LAPTM4B-203ENST00000521545 CFAP53Q96M91 514 aa34.89■■■■□ 3.18
LAPTM4B-203ENST00000521545 RPS6KA4O75676 772 aa34.88■■■■□ 3.17
LAPTM4B-203ENST00000521545 ADRA2BP18089 450 aa34.88■■■■□ 3.17
LAPTM4B-203ENST00000521545 CHD4Q14839 1912 aa34.88■■■■□ 3.17
LAPTM4B-203ENST00000521545 COL3A1P02461 1466 aaPredicted RBP34.86■■■■□ 3.17
LAPTM4B-203ENST00000521545 UTRNP46939 3433 aa34.86■■■■□ 3.17
LAPTM4B-203ENST00000521545 GRIN3BO60391 1043 aa34.85■■■■□ 3.17
LAPTM4B-203ENST00000521545 RFC4P35249 363 aa34.85■■■■□ 3.17
LAPTM4B-203ENST00000521545 ARHGEF1Q92888 912 aaKnown RBP34.85■■■■□ 3.17
LAPTM4B-203ENST00000521545 COL5A3P25940 1745 aaPredicted RBP34.84■■■■□ 3.17
LAPTM4B-203ENST00000521545 NLGN1Q8N2Q7 840 aa34.83■■■■□ 3.17
LAPTM4B-203ENST00000521545 CRKLP46109 303 aaKnown RBP34.82■■■■□ 3.16
LAPTM4B-203ENST00000521545 MMP10P09238 476 aa34.81■■■■□ 3.16
LAPTM4B-203ENST00000521545 ZNF784Q8NCA9 323 aaPredicted RBP34.81■■■■□ 3.16
LAPTM4B-203ENST00000521545 YBX3P16989 372 aaKnown RBP eCLIP34.8■■■■□ 3.165e-11■■■■□ 21
LAPTM4B-203ENST00000521545 GAS2L2Q8NHY3 880 aa34.8■■■■□ 3.16
LAPTM4B-203ENST00000521545 NUDCQ9Y266 331 aa34.8■■■■□ 3.16
LAPTM4B-203ENST00000521545 SLC39A6Q13433 755 aa34.78■■■■□ 3.16
LAPTM4B-203ENST00000521545 MRC1P22897 1456 aa34.77■■■■□ 3.16
LAPTM4B-203ENST00000521545 PPP2R1AP30153 589 aa34.76■■■■□ 3.16
LAPTM4B-203ENST00000521545 MYH14Q7Z406 1995 aaKnown RBP34.76■■■■□ 3.15
LAPTM4B-203ENST00000521545 GNAT3A8MTJ3 354 aa34.75■■■■□ 3.15
LAPTM4B-203ENST00000521545 GYS1P13807 737 aa34.75■■■■□ 3.15
LAPTM4B-203ENST00000521545 DNAJC10Q8IXB1 793 aa34.75■■■■□ 3.15
LAPTM4B-203ENST00000521545 VIRMAQ69YN4 1812 aaKnown RBP34.74■■■■□ 3.15
LAPTM4B-203ENST00000521545 TJP1Q07157 1748 aa34.72■■■■□ 3.15
LAPTM4B-203ENST00000521545 TEFQ10587 303 aa34.72■■■■□ 3.15
LAPTM4B-203ENST00000521545 INTS5Q6P9B9 1019 aaKnown RBP34.72■■■■□ 3.15
LAPTM4B-203ENST00000521545 CCDC87Q9NVE4 849 aa34.72■■■■□ 3.15
LAPTM4B-203ENST00000521545 GOLGB1Q14789 3259 aaKnown RBP34.72■■■■□ 3.15
LAPTM4B-203ENST00000521545 CICQ96RK0 1608 aaPredicted RBP34.71■■■■□ 3.15
LAPTM4B-203ENST00000521545 ADAMTS7Q9UKP4 1686 aa34.71■■■■□ 3.15
LAPTM4B-203ENST00000521545 PARP3Q9Y6F1 533 aa34.71■■■■□ 3.15
LAPTM4B-203ENST00000521545 PRKAR2BP31323 418 aa34.7■■■■□ 3.15
LAPTM4B-203ENST00000521545 TTC5Q8N0Z6 440 aa34.7■■■■□ 3.15
LAPTM4B-203ENST00000521545 U2AF1L5P0DN76 240 aaPredicted RBP34.69■■■■□ 3.14
LAPTM4B-203ENST00000521545 U2AF1Q01081 240 aaKnown RBP eCLIP34.69■■■■□ 3.14
LAPTM4B-203ENST00000521545 VSIG10Q8N0Z9 540 aa34.69■■■■□ 3.14
LAPTM4B-203ENST00000521545 CYP19A1P11511 503 aaPredicted RBP34.68■■■■□ 3.14
LAPTM4B-203ENST00000521545 IL17REQ8NFR9 667 aa34.68■■■■□ 3.14
LAPTM4B-203ENST00000521545 RSPH6AQ9H0K4 717 aa34.68■■■■□ 3.14
LAPTM4B-203ENST00000521545 SRP68Q9UHB9 627 aaKnown RBP34.67■■■■□ 3.14
LAPTM4B-203ENST00000521545 PHACTR3Q96KR7 559 aa34.66■■■■□ 3.14
LAPTM4B-203ENST00000521545 USP42Q9H9J4 1324 aaKnown RBP34.65■■■■□ 3.14
LAPTM4B-203ENST00000521545 C4AP0C0L4 1744 aa34.65■■■■□ 3.14
LAPTM4B-203ENST00000521545 WWC3Q9ULE0 1092 aa34.65■■■■□ 3.14
LAPTM4B-203ENST00000521545 KCPQ6ZWJ8 1503 aa34.65■■■■□ 3.14
LAPTM4B-203ENST00000521545 ZPR1O75312 459 aa34.64■■■■□ 3.14
LAPTM4B-203ENST00000521545 TGFB2P61812 414 aa34.64■■■■□ 3.14
LAPTM4B-203ENST00000521545 FCHSD2O94868 740 aa34.63■■■■□ 3.13
LAPTM4B-203ENST00000521545 FKBP8Q14318 412 aa34.62■■■■□ 3.13
LAPTM4B-203ENST00000521545 SOS1Q07889 1333 aaPredicted RBP34.61■■■■□ 3.13
LAPTM4B-203ENST00000521545 STARD3NLO95772 234 aa34.6■■■■□ 3.13
LAPTM4B-203ENST00000521545 ZNF790Q6PG37 636 aa34.6■■■■□ 3.13
LAPTM4B-203ENST00000521545 C10orf71Q711Q0 1435 aa34.58■■■■□ 3.13
LAPTM4B-203ENST00000521545 RTF1Q92541 710 aaKnown RBP34.58■■■■□ 3.13
LAPTM4B-203ENST00000521545 ZBTB1Q9Y2K1 713 aa34.58■■■■□ 3.13
LAPTM4B-203ENST00000521545 USPL1Q5W0Q7 1092 aa34.57■■■■□ 3.12
LAPTM4B-203ENST00000521545 ZNF496Q96IT1 587 aaPredicted RBP34.57■■■■□ 3.12
LAPTM4B-203ENST00000521545 TEX13AQ9BXU3 409 aaPredicted RBP34.57■■■■□ 3.12
LAPTM4B-203ENST00000521545 KIF13BQ9NQT8 1826 aa34.56■■■■□ 3.12
LAPTM4B-203ENST00000521545 A0A0G2JLW4 131 aa34.56■■■■□ 3.12
LAPTM4B-203ENST00000521545 CEMIPQ8WUJ3 1361 aa34.56■■■■□ 3.12
LAPTM4B-203ENST00000521545 PXDNLA1KZ92 1463 aa34.56■■■■□ 3.12
LAPTM4B-203ENST00000521545 UBR2Q8IWV8 1755 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms