RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 LRRC4BQ9NT99 713 aa20.43■□□□□ 0.86
HDAC2-209ENST00000520895 STK32BQ9NY57 414 aa20.43■□□□□ 0.86
HDAC2-209ENST00000520895 ADAMTS8Q9UP79 889 aa20.43■□□□□ 0.86
HDAC2-209ENST00000520895 MRC1P22897 1456 aa20.43■□□□□ 0.86
HDAC2-209ENST00000520895 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
HDAC2-209ENST00000520895 KCNQ4P56696 695 aa20.42■□□□□ 0.86
HDAC2-209ENST00000520895 TEFQ10587 303 aa20.42■□□□□ 0.86
HDAC2-209ENST00000520895 CCDC184Q52MB2 194 aa20.42■□□□□ 0.86
HDAC2-209ENST00000520895 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
HDAC2-209ENST00000520895 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
HDAC2-209ENST00000520895 HMGB2P26583 209 aaKnown RBP20.41■□□□□ 0.86
HDAC2-209ENST00000520895 NFE2L2Q16236 605 aa20.41■□□□□ 0.86
HDAC2-209ENST00000520895 CCDC146Q8IYE0 955 aa20.41■□□□□ 0.86
HDAC2-209ENST00000520895 LOC102724428A0A0B4J2F2 783 aa20.4■□□□□ 0.86
HDAC2-209ENST00000520895 C5P01031 1676 aa20.4■□□□□ 0.86
HDAC2-209ENST00000520895 SIK1P57059 783 aa20.4■□□□□ 0.86
HDAC2-209ENST00000520895 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
HDAC2-209ENST00000520895 ANO8Q9HCE9 1232 aaPredicted RBP20.4■□□□□ 0.86
HDAC2-209ENST00000520895 MCM10Q7L590 875 aa20.39■□□□□ 0.85
HDAC2-209ENST00000520895 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
HDAC2-209ENST00000520895 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.85
HDAC2-209ENST00000520895 SLC15A2Q16348 729 aa20.38■□□□□ 0.85
HDAC2-209ENST00000520895 SIPA1L3O60292 1781 aaPredicted RBP20.38■□□□□ 0.85
HDAC2-209ENST00000520895 LRP5O75197 1615 aa20.38■□□□□ 0.85
HDAC2-209ENST00000520895 CEMIPQ8WUJ3 1361 aa20.37■□□□□ 0.85
HDAC2-209ENST00000520895 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
HDAC2-209ENST00000520895 PTCD1O75127 700 aaKnown RBP20.36■□□□□ 0.85
HDAC2-209ENST00000520895 RIPK4P57078 832 aa20.36■□□□□ 0.85
HDAC2-209ENST00000520895 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
HDAC2-209ENST00000520895 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
HDAC2-209ENST00000520895 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
HDAC2-209ENST00000520895 ZNF827Q17R98 1081 aa20.35■□□□□ 0.85
HDAC2-209ENST00000520895 TTC5Q8N0Z6 440 aa20.35■□□□□ 0.85
HDAC2-209ENST00000520895 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
HDAC2-209ENST00000520895 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
HDAC2-209ENST00000520895 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
HDAC2-209ENST00000520895 AKT1S1Q96B36 256 aa20.34■□□□□ 0.85
HDAC2-209ENST00000520895 TFCP2L1Q9NZI6 479 aa20.34■□□□□ 0.85
HDAC2-209ENST00000520895 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
HDAC2-209ENST00000520895 ZNF831Q5JPB2 1677 aa20.34■□□□□ 0.85
HDAC2-209ENST00000520895 BTBD11A6QL63 1104 aa20.33■□□□□ 0.85
HDAC2-209ENST00000520895 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.85
HDAC2-209ENST00000520895 C4BP0C0L5 1744 aa20.33■□□□□ 0.84
HDAC2-209ENST00000520895 ITPK1Q13572 414 aa20.32■□□□□ 0.84
HDAC2-209ENST00000520895 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
HDAC2-209ENST00000520895 QSER1Q2KHR3 1735 aa20.32■□□□□ 0.84
HDAC2-209ENST00000520895 AK7Q96M32 723 aa20.31■□□□□ 0.84
HDAC2-209ENST00000520895 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
HDAC2-209ENST00000520895 TUBGCP6Q96RT7 1819 aa20.3■□□□□ 0.84
HDAC2-209ENST00000520895 ZNF790Q6PG37 636 aa20.3■□□□□ 0.84
HDAC2-209ENST00000520895 LINC00116Q8NCU8 138 aa20.3■□□□□ 0.84
HDAC2-209ENST00000520895 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
HDAC2-209ENST00000520895 KCPQ6ZWJ8 1503 aa20.29■□□□□ 0.84
HDAC2-209ENST00000520895 APAF1O14727 1248 aa20.29■□□□□ 0.84
HDAC2-209ENST00000520895 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
HDAC2-209ENST00000520895 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
HDAC2-209ENST00000520895 COL5A3P25940 1745 aaPredicted RBP20.29■□□□□ 0.84
HDAC2-209ENST00000520895 TJP1Q07157 1748 aa20.28■□□□□ 0.84
HDAC2-209ENST00000520895 FAM9BQ8IZU0 186 aa20.27■□□□□ 0.84
HDAC2-209ENST00000520895 MSH5O43196 834 aa20.26■□□□□ 0.83
HDAC2-209ENST00000520895 VSIG10Q8N0Z9 540 aa20.26■□□□□ 0.83
HDAC2-209ENST00000520895 ZNF496Q96IT1 587 aaPredicted RBP20.26■□□□□ 0.83
HDAC2-209ENST00000520895 FMNL2Q96PY5 1086 aa20.26■□□□□ 0.83
HDAC2-209ENST00000520895 PDGFDQ9GZP0 370 aaPredicted RBP20.26■□□□□ 0.83
HDAC2-209ENST00000520895 CICQ96RK0 1608 aaPredicted RBP20.26■□□□□ 0.83
HDAC2-209ENST00000520895 PNPLA7Q6ZV29 1317 aa20.26■□□□□ 0.83
HDAC2-209ENST00000520895 UBR3Q6ZT12 1888 aa20.25■□□□□ 0.83
HDAC2-209ENST00000520895 GNPATO15228 680 aa20.25■□□□□ 0.83
HDAC2-209ENST00000520895 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
HDAC2-209ENST00000520895 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
HDAC2-209ENST00000520895 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
HDAC2-209ENST00000520895 KCNQ3O43525 872 aa20.24■□□□□ 0.83
HDAC2-209ENST00000520895 PHF14O94880 888 aa20.24■□□□□ 0.83
HDAC2-209ENST00000520895 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
HDAC2-209ENST00000520895 CNTNAP4Q9C0A0 1308 aa20.24■□□□□ 0.83
HDAC2-209ENST00000520895 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
HDAC2-209ENST00000520895 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
HDAC2-209ENST00000520895 ZBTB7AO95365 584 aa20.23■□□□□ 0.83
HDAC2-209ENST00000520895 RC3H1Q5TC82 1133 aaKnown RBP20.23■□□□□ 0.83
HDAC2-209ENST00000520895 CCER2I3L3R5 266 aa20.22■□□□□ 0.83
HDAC2-209ENST00000520895 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
HDAC2-209ENST00000520895 COL23A1Q86Y22 540 aaPredicted RBP20.22■□□□□ 0.83
HDAC2-209ENST00000520895 TEX13AQ9BXU3 409 aaPredicted RBP20.22■□□□□ 0.83
HDAC2-209ENST00000520895 SPON1Q9HCB6 807 aa20.22■□□□□ 0.83
HDAC2-209ENST00000520895 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
HDAC2-209ENST00000520895 COL24A1Q17RW2 1714 aa20.22■□□□□ 0.83
HDAC2-209ENST00000520895 MYH14Q7Z406 1995 aaKnown RBP20.21■□□□□ 0.83
HDAC2-209ENST00000520895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
HDAC2-209ENST00000520895 STARD3NLO95772 234 aa20.21■□□□□ 0.83
HDAC2-209ENST00000520895 CYP19A1P11511 503 aaPredicted RBP20.21■□□□□ 0.83
HDAC2-209ENST00000520895 SSFA2P28290 1259 aa20.21■□□□□ 0.83
HDAC2-209ENST00000520895 TSPYL4Q9UJ04 414 aa20.21■□□□□ 0.83
HDAC2-209ENST00000520895 SLC16A10Q8TF71 515 aa20.2■□□□□ 0.82
HDAC2-209ENST00000520895 MTFR1LQ9H019 292 aa20.2■□□□□ 0.82
HDAC2-209ENST00000520895 LAS1LQ9Y4W2 734 aaKnown RBP20.2■□□□□ 0.82
HDAC2-209ENST00000520895 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
HDAC2-209ENST00000520895 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
HDAC2-209ENST00000520895 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
HDAC2-209ENST00000520895 AMIGO3Q86WK7 504 aa20.19■□□□□ 0.82
HDAC2-209ENST00000520895 CCDC87Q9NVE4 849 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms