RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SHISA8B8ZZ34 492 aa8.39□□□□□ -1.07
SQLE-204ENST00000520493 ADH1AP07327 375 aa8.39□□□□□ -1.07
SQLE-204ENST00000520493 WWC1Q8IX03 1113 aa8.39□□□□□ -1.07
SQLE-204ENST00000520493 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
SQLE-204ENST00000520493 GDPD2Q9HCC8 539 aa8.39□□□□□ -1.07
SQLE-204ENST00000520493 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
SQLE-204ENST00000520493 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
SQLE-204ENST00000520493 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
SQLE-204ENST00000520493 CD163Q86VB7 1156 aa8.38□□□□□ -1.07
SQLE-204ENST00000520493 FLIIQ13045 1269 aa8.37□□□□□ -1.07
SQLE-204ENST00000520493 LILRA1O75019 489 aa8.36□□□□□ -1.07
SQLE-204ENST00000520493 CC2D2BQ6DHV5 1058 aa8.36□□□□□ -1.07
SQLE-204ENST00000520493 GAS2L1Q99501 681 aaPredicted RBP8.36□□□□□ -1.07
SQLE-204ENST00000520493 PCDHB11Q9Y5F2 797 aa8.36□□□□□ -1.07
SQLE-204ENST00000520493 ATP5J2-PTCD1G3V325 749 aa8.35□□□□□ -1.07
SQLE-204ENST00000520493 H7C1W4 665 aa8.35□□□□□ -1.07
SQLE-204ENST00000520493 RAD21O60216 631 aa8.35□□□□□ -1.07
SQLE-204ENST00000520493 PTGIRP43119 386 aa8.35□□□□□ -1.07
SQLE-204ENST00000520493 CHRNA4P43681 627 aa8.35□□□□□ -1.07
SQLE-204ENST00000520493 IRF5Q13568 498 aa8.35□□□□□ -1.07
SQLE-204ENST00000520493 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
SQLE-204ENST00000520493 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
SQLE-204ENST00000520493 ERVK-9P63128 1117 aa8.34□□□□□ -1.07
SQLE-204ENST00000520493 VAC14Q08AM6 782 aa8.34□□□□□ -1.07
SQLE-204ENST00000520493 SLFNL1Q499Z3 407 aa8.34□□□□□ -1.07
SQLE-204ENST00000520493 C1orf229Q6ZS94 237 aaPredicted RBP8.34□□□□□ -1.07
SQLE-204ENST00000520493 CYP2U1Q7Z449 544 aa8.34□□□□□ -1.07
SQLE-204ENST00000520493 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
SQLE-204ENST00000520493 CEP126Q9P2H0 1117 aa8.34□□□□□ -1.07
SQLE-204ENST00000520493 MYCP01106 439 aaPredicted RBP8.33□□□□□ -1.08
SQLE-204ENST00000520493 SOX11P35716 441 aa8.33□□□□□ -1.08
SQLE-204ENST00000520493 MAP2K3P46734 347 aa8.33□□□□□ -1.08
SQLE-204ENST00000520493 UBTFP17480 764 aaKnown RBP8.32□□□□□ -1.08
SQLE-204ENST00000520493 AMPD1P23109 780 aa8.32□□□□□ -1.08
SQLE-204ENST00000520493 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
SQLE-204ENST00000520493 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
SQLE-204ENST00000520493 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
SQLE-204ENST00000520493 EDARADDQ8WWZ3 215 aa8.32□□□□□ -1.08
SQLE-204ENST00000520493 LINC00114Q6XXX2 140 aa8.31□□□□□ -1.08
SQLE-204ENST00000520493 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
SQLE-204ENST00000520493 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
SQLE-204ENST00000520493 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
SQLE-204ENST00000520493 GOLGA2P5Q9HBQ8 144 aa8.31□□□□□ -1.08
SQLE-204ENST00000520493 ZFP64Q9NPA5 681 aa8.31□□□□□ -1.08
SQLE-204ENST00000520493 COG6Q9Y2V7 657 aa8.31□□□□□ -1.08
SQLE-204ENST00000520493 MEN1O00255 615 aa8.3□□□□□ -1.08
SQLE-204ENST00000520493 RNF144AP50876 292 aaPredicted RBP8.3□□□□□ -1.08
SQLE-204ENST00000520493 NLRP3Q96P20 1036 aa8.3□□□□□ -1.08
SQLE-204ENST00000520493 DOLKQ9UPQ8 538 aa8.3□□□□□ -1.08
SQLE-204ENST00000520493 KLRG1Q96E93 195 aa8.29□□□□□ -1.08
SQLE-204ENST00000520493 SIRT1Q96EB6 747 aa8.29□□□□□ -1.08
SQLE-204ENST00000520493 DYRK1BQ9Y463 629 aa8.29□□□□□ -1.08
SQLE-204ENST00000520493 SCTRP47872 440 aa8.28□□□□□ -1.08
SQLE-204ENST00000520493 GTF3C3Q9Y5Q9 886 aa8.28□□□□□ -1.08
SQLE-204ENST00000520493 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
SQLE-204ENST00000520493 GNB5O14775 395 aa8.27□□□□□ -1.09
SQLE-204ENST00000520493 GPC1P35052 558 aa8.27□□□□□ -1.09
SQLE-204ENST00000520493 POU4F2Q12837 409 aa8.27□□□□□ -1.09
SQLE-204ENST00000520493 USP4Q13107 963 aa8.27□□□□□ -1.09
SQLE-204ENST00000520493 ARTNQ5T4W7 220 aa8.27□□□□□ -1.09
SQLE-204ENST00000520493 CCDC85AQ96PX6 553 aaPredicted RBP8.27□□□□□ -1.09
SQLE-204ENST00000520493 PIK3R2O00459 728 aa8.26□□□□□ -1.09
SQLE-204ENST00000520493 GNRH1P01148 92 aa8.26□□□□□ -1.09
SQLE-204ENST00000520493 SLC27A3Q5K4L6 730 aa8.26□□□□□ -1.09
SQLE-204ENST00000520493 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
SQLE-204ENST00000520493 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
SQLE-204ENST00000520493 GDF2Q9UK05 429 aaPredicted RBP8.26□□□□□ -1.09
SQLE-204ENST00000520493 TRAK2O60296 914 aa8.25□□□□□ -1.09
SQLE-204ENST00000520493 HOXB4P17483 251 aaPredicted RBP8.25□□□□□ -1.09
SQLE-204ENST00000520493 GATA4P43694 442 aa8.25□□□□□ -1.09
SQLE-204ENST00000520493 CLN3Q13286 438 aa8.25□□□□□ -1.09
SQLE-204ENST00000520493 MAP7D1Q3KQU3 841 aa8.25□□□□□ -1.09
SQLE-204ENST00000520493 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
SQLE-204ENST00000520493 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
SQLE-204ENST00000520493 GTF2E1P29083 439 aaPredicted RBP8.24□□□□□ -1.09
SQLE-204ENST00000520493 ESCO1Q5FWF5 840 aa8.24□□□□□ -1.09
SQLE-204ENST00000520493 PHTF2Q8N3S3 785 aa8.24□□□□□ -1.09
SQLE-204ENST00000520493 POM121Q96HA1 1249 aa8.24□□□□□ -1.09
SQLE-204ENST00000520493 CDCA7Q9BWT1 371 aaPredicted RBP8.24□□□□□ -1.09
SQLE-204ENST00000520493 GOLGA6L1Q8N7Z2 621 aa8.23□□□□□ -1.09
SQLE-204ENST00000520493 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
SQLE-204ENST00000520493 RAB6BQ9NRW1 208 aa8.22□□□□□ -1.09
SQLE-204ENST00000520493 NOP53Q9NZM5 478 aaKnown RBP8.22□□□□□ -1.09
SQLE-204ENST00000520493 RSPO4Q2I0M5 234 aaPredicted RBP8.21□□□□□ -1.1
SQLE-204ENST00000520493 CNKSR1Q969H4 720 aa8.21□□□□□ -1.1
SQLE-204ENST00000520493 ESYT1Q9BSJ8 1104 aa8.21□□□□□ -1.1
SQLE-204ENST00000520493 CFHR5Q9BXR6 569 aa8.21□□□□□ -1.1
SQLE-204ENST00000520493 CHIC2Q9UKJ5 165 aa8.2□□□□□ -1.1
SQLE-204ENST00000520493 F11P03951 625 aa8.19□□□□□ -1.1
SQLE-204ENST00000520493 TSGA10IPQ3SY00 556 aa8.19□□□□□ -1.1
SQLE-204ENST00000520493 NFATC2IPQ8NCF5 419 aa8.19□□□□□ -1.1
SQLE-204ENST00000520493 BTBD6Q96KE9 485 aa8.19□□□□□ -1.1
SQLE-204ENST00000520493 ALG2Q9H553 416 aa8.19□□□□□ -1.1
SQLE-204ENST00000520493 PHF24Q9UPV7 400 aa8.19□□□□□ -1.1
SQLE-204ENST00000520493 LZTS3O60299 673 aaPredicted RBP8.18□□□□□ -1.1
SQLE-204ENST00000520493 SKIP12755 728 aa8.18□□□□□ -1.1
SQLE-204ENST00000520493 EML3Q32P44 896 aa8.18□□□□□ -1.1
SQLE-204ENST00000520493 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
SQLE-204ENST00000520493 TAS1R3Q7RTX0 852 aa8.18□□□□□ -1.1
SQLE-204ENST00000520493 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms