RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 PKD1L3Q7Z443 1732 aa7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 CLCN6P51797 869 aa7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 POTEGQ6S5H5 508 aa7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 TFCP2L1Q9NZI6 479 aa7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 PCDH10Q9P2E7 1040 aa7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 POLKQ9UBT6 870 aa7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 CCNL1Q9UK58 526 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 NSD3Q9BZ95 1437 aa7.83□□□□□ -1.16
CTNNA1-219ENST00000520158 TAF1LQ8IZX4 1826 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 POLD1P28340 1107 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 CHADLQ6NUI6 762 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 USHBP1Q8N6Y0 703 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 FLAD1Q8NFF5 587 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 SMARCC1Q92922 1105 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 SYTL4Q96C24 671 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 SPG7Q9UQ90 795 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 EMILIN1Q9Y6C2 1016 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 ITGB4P16144 1822 aa7.82□□□□□ -1.16
CTNNA1-219ENST00000520158 TULP1O00294 542 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-219ENST00000520158 KCNQ4P56696 695 aa7.81□□□□□ -1.16
CTNNA1-219ENST00000520158 COL23A1Q86Y22 540 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-219ENST00000520158 EYA1Q99502 592 aa7.81□□□□□ -1.16
CTNNA1-219ENST00000520158 PODXL2Q9NZ53 605 aa7.81□□□□□ -1.16
CTNNA1-219ENST00000520158 C5P01031 1676 aa7.8□□□□□ -1.16
CTNNA1-219ENST00000520158 EIF4G2P78344 907 aaKnown RBP eCLIP7.8□□□□□ -1.16
CTNNA1-219ENST00000520158 ZNF784Q8NCA9 323 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-219ENST00000520158 PIGBQ92521 554 aa7.8□□□□□ -1.16
CTNNA1-219ENST00000520158 PALLDQ8WX93 1383 aa7.8□□□□□ -1.16
CTNNA1-219ENST00000520158 TOGARAM1Q9Y4F4 1720 aa7.8□□□□□ -1.16
CTNNA1-219ENST00000520158 EIF4A2Q14240 407 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-219ENST00000520158 MPRIPQ6WCQ1 1025 aa7.79□□□□□ -1.16
CTNNA1-219ENST00000520158 IFNL2Q8IZJ0 200 aa7.79□□□□□ -1.16
CTNNA1-219ENST00000520158 UBE2Q2Q8WVN8 375 aa7.79□□□□□ -1.16
CTNNA1-219ENST00000520158 CD2APQ9Y5K6 639 aa7.79□□□□□ -1.16
CTNNA1-219ENST00000520158 ZNF831Q5JPB2 1677 aa7.79□□□□□ -1.16
CTNNA1-219ENST00000520158 IGSF1Q8N6C5 1336 aa7.78□□□□□ -1.16
CTNNA1-219ENST00000520158 C4BP0C0L5 1744 aa7.78□□□□□ -1.16
CTNNA1-219ENST00000520158 ERVV-2B6SEH9 535 aa7.78□□□□□ -1.16
CTNNA1-219ENST00000520158 HSPA5P11021 654 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-219ENST00000520158 PHKG2P15735 406 aa7.78□□□□□ -1.16
CTNNA1-219ENST00000520158 UBR3Q6ZT12 1888 aa7.78□□□□□ -1.16
CTNNA1-219ENST00000520158 LOC102724428A0A0B4J2F2 783 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 PPM1GO15355 546 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 GRIN3BO60391 1043 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 SSFA2P28290 1259 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 SIK1P57059 783 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 GPR162Q16538 588 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 PCGF6Q9BYE7 350 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 PANK3Q9H999 370 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 ATG3Q9NT62 314 aa7.77□□□□□ -1.17
CTNNA1-219ENST00000520158 POTEB2H3BUK9 544 aa7.76□□□□□ -1.17
CTNNA1-219ENST00000520158 HSP90AB1P08238 724 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-219ENST00000520158 NLGN2Q8NFZ4 835 aa7.76□□□□□ -1.17
CTNNA1-219ENST00000520158 DCAF5Q96JK2 942 aa7.76□□□□□ -1.17
CTNNA1-219ENST00000520158 TMOD3Q9NYL9 352 aa7.76□□□□□ -1.17
CTNNA1-219ENST00000520158 ASAP1Q9ULH1 1129 aa7.76□□□□□ -1.17
CTNNA1-219ENST00000520158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 CD44P16070 742 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 AMOTQ4VCS5 1084 aa7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 PLEKHO1Q53GL0 409 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 RC3H1Q5TC82 1133 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 LINC00116Q8NCU8 138 aa7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 AK7Q96M32 723 aa7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 DCBLD2Q96PD2 775 aa7.75□□□□□ -1.17
CTNNA1-219ENST00000520158 UTRNP46939 3433 aa7.74□□□□□ -1.17
CTNNA1-219ENST00000520158 KDRP35968 1356 aa7.74□□□□□ -1.17
CTNNA1-219ENST00000520158 PER1O15534 1290 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-219ENST00000520158 YBX3P16989 372 aaKnown RBP eCLIP7.74□□□□□ -1.17
CTNNA1-219ENST00000520158 ITPK1Q13572 414 aa7.74□□□□□ -1.17
CTNNA1-219ENST00000520158 SSUH2Q9Y2M2 353 aa7.74□□□□□ -1.17
CTNNA1-219ENST00000520158 IL13P35225 146 aa7.73□□□□□ -1.17
CTNNA1-219ENST00000520158 ATP6V1AP38606 617 aa7.73□□□□□ -1.17
CTNNA1-219ENST00000520158 C1QTNF8P60827 252 aa7.73□□□□□ -1.17
CTNNA1-219ENST00000520158 MORC1Q86VD1 984 aa7.73□□□□□ -1.17
CTNNA1-219ENST00000520158 SLC4A9Q96Q91 983 aa7.73□□□□□ -1.17
CTNNA1-219ENST00000520158 CNTNAP4Q9C0A0 1308 aa7.73□□□□□ -1.17
CTNNA1-219ENST00000520158 KIF13BQ9NQT8 1826 aa7.73□□□□□ -1.17
CTNNA1-219ENST00000520158 KDM6AO15550 1401 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 CICQ96RK0 1608 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 RPS6KA4O75676 772 aa7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 TNNT2P45379 298 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 MSL1Q68DK7 614 aa7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 NLGN1Q8N2Q7 840 aa7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 KNSTRNQ9Y448 316 aa7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 COL5A3P25940 1745 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-219ENST00000520158 CENPBP07199 599 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 MTHFSP49914 203 aa7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 TGFB2P61812 414 aa7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 FKBP8Q14318 412 aa7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 TRAPPC3LQ5T215 181 aa7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 TAOK2Q9UL54 1235 aa7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 NPC1L1Q9UHC9 1359 aa7.71□□□□□ -1.18
CTNNA1-219ENST00000520158 MYH14Q7Z406 1995 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-219ENST00000520158 SCN11AQ9UI33 1791 aa7.7□□□□□ -1.18
CTNNA1-219ENST00000520158 GNPATO15228 680 aa7.7□□□□□ -1.18
CTNNA1-219ENST00000520158 CABP4P57796 275 aa7.7□□□□□ -1.18
CTNNA1-219ENST00000520158 AKAP4Q5JQC9 854 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms