RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TEFQ10587 303 aa29.84■■■□□ 2.37
SKP1-206ENST00000519321 NBPF14Q5TI25 921 aa29.84■■■□□ 2.37
SKP1-206ENST00000519321 IL17REQ8NFR9 667 aa29.84■■■□□ 2.37
SKP1-206ENST00000519321 NUP188Q5SRE5 1749 aa29.84■■■□□ 2.37
SKP1-206ENST00000519321 CEMIPQ8WUJ3 1361 aa29.82■■■□□ 2.36
SKP1-206ENST00000519321 CCDC146Q8IYE0 955 aa29.82■■■□□ 2.36
SKP1-206ENST00000519321 ATG3Q9NT62 314 aa29.81■■■□□ 2.36
SKP1-206ENST00000519321 ASAP1Q9ULH1 1129 aa29.81■■■□□ 2.36
SKP1-206ENST00000519321 CCNL1Q9UK58 526 aaPredicted RBP29.8■■■□□ 2.36
SKP1-206ENST00000519321 DLG5Q8TDM6 1919 aa29.79■■■□□ 2.36
SKP1-206ENST00000519321 TMPOP42166 694 aaKnown RBP29.79■■■□□ 2.36
SKP1-206ENST00000519321 LMOD3Q0VAK6 560 aa29.79■■■□□ 2.36
SKP1-206ENST00000519321 RIPK4P57078 832 aa29.78■■■□□ 2.36
SKP1-206ENST00000519321 CCER2I3L3R5 266 aa29.76■■■□□ 2.35
SKP1-206ENST00000519321 MCM10Q7L590 875 aa29.76■■■□□ 2.35
SKP1-206ENST00000519321 LRRC4BQ9NT99 713 aa29.76■■■□□ 2.35
SKP1-206ENST00000519321 LOC102724428A0A0B4J2F2 783 aa29.75■■■□□ 2.35
SKP1-206ENST00000519321 SIK1P57059 783 aa29.75■■■□□ 2.35
SKP1-206ENST00000519321 SIPA1L3O60292 1781 aaPredicted RBP29.73■■■□□ 2.35
SKP1-206ENST00000519321 DCTN1Q14203 1278 aa29.73■■■□□ 2.35
SKP1-206ENST00000519321 STK32BQ9NY57 414 aa29.73■■■□□ 2.35
SKP1-206ENST00000519321 TTC5Q8N0Z6 440 aa29.72■■■□□ 2.35
SKP1-206ENST00000519321 PAPPAQ13219 1627 aa29.71■■■□□ 2.35
SKP1-206ENST00000519321 NEUROD2Q15784 382 aa29.71■■■□□ 2.35
SKP1-206ENST00000519321 RBM42Q9BTD8 480 aaKnown RBP29.71■■■□□ 2.35
SKP1-206ENST00000519321 ZNF831Q5JPB2 1677 aa29.7■■■□□ 2.35
SKP1-206ENST00000519321 ATP6V1AP38606 617 aa29.7■■■□□ 2.35
SKP1-206ENST00000519321 RRP7AQ9Y3A4 280 aaKnown RBP29.7■■■□□ 2.35
SKP1-206ENST00000519321 BTBD11A6QL63 1104 aa29.69■■■□□ 2.34
SKP1-206ENST00000519321 APAF1O14727 1248 aa29.69■■■□□ 2.34
SKP1-206ENST00000519321 TAF7Q15545 349 aaPredicted RBP29.69■■■□□ 2.34
SKP1-206ENST00000519321 PTCD1O75127 700 aaKnown RBP29.68■■■□□ 2.34
SKP1-206ENST00000519321 KCNQ4P56696 695 aa29.68■■■□□ 2.34
SKP1-206ENST00000519321 SLC39A6Q13433 755 aa29.68■■■□□ 2.34
SKP1-206ENST00000519321 SLC15A2Q16348 729 aa29.68■■■□□ 2.34
SKP1-206ENST00000519321 FAM9BQ8IZU0 186 aa29.68■■■□□ 2.34
SKP1-206ENST00000519321 ANO8Q9HCE9 1232 aaPredicted RBP29.68■■■□□ 2.34
SKP1-206ENST00000519321 C5P01031 1676 aa29.68■■■□□ 2.34
SKP1-206ENST00000519321 R3HDM1Q15032 1099 aaKnown RBP29.67■■■□□ 2.34
SKP1-206ENST00000519321 ZNF790Q6PG37 636 aa29.67■■■□□ 2.34
SKP1-206ENST00000519321 TAF1LQ8IZX4 1826 aa29.65■■■□□ 2.34
SKP1-206ENST00000519321 AKT1S1Q96B36 256 aa29.64■■■□□ 2.34
SKP1-206ENST00000519321 UBR2Q8IWV8 1755 aa29.63■■■□□ 2.33
SKP1-206ENST00000519321 VSIG10Q8N0Z9 540 aa29.63■■■□□ 2.33
SKP1-206ENST00000519321 THUMPD2Q9BTF0 503 aaKnown RBP29.63■■■□□ 2.33
SKP1-206ENST00000519321 TRIM35Q9UPQ4 493 aa29.63■■■□□ 2.33
SKP1-206ENST00000519321 KCPQ6ZWJ8 1503 aa29.62■■■□□ 2.33
SKP1-206ENST00000519321 PSDA5PKW4 1024 aaPredicted RBP29.62■■■□□ 2.33
SKP1-206ENST00000519321 ITPK1Q13572 414 aa29.62■■■□□ 2.33
SKP1-206ENST00000519321 NCBP3Q53F19 620 aaKnown RBP29.62■■■□□ 2.33
SKP1-206ENST00000519321 SLC4A9Q96Q91 983 aa29.62■■■□□ 2.33
SKP1-206ENST00000519321 CICQ96RK0 1608 aaPredicted RBP29.61■■■□□ 2.33
SKP1-206ENST00000519321 ZNF827Q17R98 1081 aa29.61■■■□□ 2.33
SKP1-206ENST00000519321 FMNL2Q96PY5 1086 aa29.61■■■□□ 2.33
SKP1-206ENST00000519321 BABAM1Q9NWV8 329 aa29.61■■■□□ 2.33
SKP1-206ENST00000519321 C4BP0C0L5 1744 aa29.6■■■□□ 2.33
SKP1-206ENST00000519321 MIER1Q8N108 512 aa29.6■■■□□ 2.33
SKP1-206ENST00000519321 TFCP2L1Q9NZI6 479 aa29.6■■■□□ 2.33
SKP1-206ENST00000519321 CALD1Q05682 793 aaKnown RBP29.59■■■□□ 2.33
SKP1-206ENST00000519321 LINC00116Q8NCU8 138 aa29.59■■■□□ 2.33
SKP1-206ENST00000519321 AK7Q96M32 723 aa29.59■■■□□ 2.33
SKP1-206ENST00000519321 ZNF496Q96IT1 587 aaPredicted RBP29.58■■■□□ 2.33
SKP1-206ENST00000519321 HEG1Q9ULI3 1381 aa29.57■■■□□ 2.32
SKP1-206ENST00000519321 CCDC27Q2M243 656 aa29.57■■■□□ 2.32
SKP1-206ENST00000519321 RC3H1Q5TC82 1133 aaKnown RBP29.57■■■□□ 2.32
SKP1-206ENST00000519321 TEX13AQ9BXU3 409 aaPredicted RBP29.57■■■□□ 2.32
SKP1-206ENST00000519321 QSER1Q2KHR3 1735 aa29.57■■■□□ 2.32
SKP1-206ENST00000519321 COL5A3P25940 1745 aaPredicted RBP29.56■■■□□ 2.32
SKP1-206ENST00000519321 TJP1Q07157 1748 aa29.56■■■□□ 2.32
SKP1-206ENST00000519321 CNTNAP4Q9C0A0 1308 aa29.55■■■□□ 2.32
SKP1-206ENST00000519321 NGEFQ8N5V2 710 aa29.55■■■□□ 2.32
SKP1-206ENST00000519321 FLAD1Q8NFF5 587 aa29.55■■■□□ 2.32
SKP1-206ENST00000519321 KDM3BQ7LBC6 1761 aa29.54■■■□□ 2.32
SKP1-206ENST00000519321 KCNQ3O43525 872 aa29.54■■■□□ 2.32
SKP1-206ENST00000519321 MIS18AQ9NYP9 233 aa29.54■■■□□ 2.32
SKP1-206ENST00000519321 TSPYL4Q9UJ04 414 aa29.54■■■□□ 2.32
SKP1-206ENST00000519321 DNAJC10Q8IXB1 793 aa29.53■■■□□ 2.32
SKP1-206ENST00000519321 STARD3NLO95772 234 aa29.52■■■□□ 2.32
SKP1-206ENST00000519321 GNPATO15228 680 aa29.5■■■□□ 2.31
SKP1-206ENST00000519321 SNRPA1P09661 255 aaKnown RBP29.5■■■□□ 2.31
SKP1-206ENST00000519321 SSFA2P28290 1259 aa29.5■■■□□ 2.31
SKP1-206ENST00000519321 CRKLP46109 303 aaKnown RBP29.5■■■□□ 2.31
SKP1-206ENST00000519321 PNPLA7Q6ZV29 1317 aa29.49■■■□□ 2.31
SKP1-206ENST00000519321 CHL1O00533 1208 aa29.49■■■□□ 2.31
SKP1-206ENST00000519321 CYP19A1P11511 503 aaPredicted RBP29.49■■■□□ 2.31
SKP1-206ENST00000519321 CFAP44Q96MT7 982 aa29.49■■■□□ 2.31
SKP1-206ENST00000519321 RTCBQ9Y3I0 505 aaKnown RBP29.49■■■□□ 2.31
SKP1-206ENST00000519321 TUBGCP6Q96RT7 1819 aa29.48■■■□□ 2.31
SKP1-206ENST00000519321 EIF4A1P60842 406 aaKnown RBP29.48■■■□□ 2.31
SKP1-206ENST00000519321 WWC1Q8IX03 1113 aa29.48■■■□□ 2.31
SKP1-206ENST00000519321 LAS1LQ9Y4W2 734 aaKnown RBP29.48■■■□□ 2.31
SKP1-206ENST00000519321 CASZ1Q86V15 1759 aa29.48■■■□□ 2.31
SKP1-206ENST00000519321 UBR3Q6ZT12 1888 aa29.48■■■□□ 2.31
SKP1-206ENST00000519321 GNAI1P63096 354 aa29.47■■■□□ 2.31
SKP1-206ENST00000519321 SLC16A10Q8TF71 515 aa29.47■■■□□ 2.31
SKP1-206ENST00000519321 CCDC87Q9NVE4 849 aa29.47■■■□□ 2.31
SKP1-206ENST00000519321 IFT57Q9NWB7 429 aa29.47■■■□□ 2.31
SKP1-206ENST00000519321 RPS6KA4O75676 772 aa29.46■■■□□ 2.31
SKP1-206ENST00000519321 ADRA2BP18089 450 aa29.45■■■□□ 2.31
SKP1-206ENST00000519321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms