RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	PIGB	Q92521	554 aa		31.84	■■■□□ 2.69
PCM1-209	ENST00000518930	BAG6	P46379	1132 aa		31.83	■■■□□ 2.69
PCM1-209	ENST00000518930	NFATC2IP	Q8NCF5	419 aa		31.83	■■■□□ 2.69
PCM1-209	ENST00000518930	PAPPA	Q13219	1627 aa		31.8	■■■□□ 2.68
PCM1-209	ENST00000518930	SENP3-EIF4A1	A0A087X0R7	540 aa		31.8	■■■□□ 2.68
PCM1-209	ENST00000518930	TRIM35	Q9UPQ4	493 aa		31.8	■■■□□ 2.68
PCM1-209	ENST00000518930	THUMPD2	Q9BTF0	503 aa	Known RBP	31.79	■■■□□ 2.68
PCM1-209	ENST00000518930	SMARCC1	Q92922	1105 aa	Predicted RBP	31.78	■■■□□ 2.68
PCM1-209	ENST00000518930	SOCS7	O14512	581 aa		31.77	■■■□□ 2.68
PCM1-209	ENST00000518930	NCBP3	Q53F19	620 aa	Known RBP	31.77	■■■□□ 2.68
PCM1-209	ENST00000518930	NGEF	Q8N5V2	710 aa		31.77	■■■□□ 2.68
PCM1-209	ENST00000518930	LY75	O60449	1722 aa		31.76	■■■□□ 2.67
PCM1-209	ENST00000518930	PALLD	Q8WX93	1383 aa		31.76	■■■□□ 2.67
PCM1-209	ENST00000518930	PLSCR1	O15162	318 aa		31.75	■■■□□ 2.67
PCM1-209	ENST00000518930	CCDC27	Q2M243	656 aa		31.75	■■■□□ 2.67
PCM1-209	ENST00000518930	SALL2	Q9Y467	1007 aa	Predicted RBP	31.75	■■■□□ 2.67
PCM1-209	ENST00000518930	CALD1	Q05682	793 aa	Known RBP	31.74	■■■□□ 2.67
PCM1-209	ENST00000518930	ASAP1	Q9ULH1	1129 aa		31.74	■■■□□ 2.67
PCM1-209	ENST00000518930	BTBD11	A6QL63	1104 aa		31.73	■■■□□ 2.67
PCM1-209	ENST00000518930	TAF7	Q15545	349 aa	Predicted RBP	31.73	■■■□□ 2.67
PCM1-209	ENST00000518930	DEFB132	Q7Z7B7	95 aa		31.73	■■■□□ 2.67
PCM1-209	ENST00000518930	ATG3	Q9NT62	314 aa		31.73	■■■□□ 2.67
PCM1-209	ENST00000518930	EN1	Q05925	392 aa	Predicted RBP	31.72	■■■□□ 2.67
PCM1-209	ENST00000518930	TTC5	Q8N0Z6	440 aa		31.72	■■■□□ 2.67
PCM1-209	ENST00000518930	UBR2	Q8IWV8	1755 aa		31.71	■■■□□ 2.67
PCM1-209	ENST00000518930	RREB1	Q92766	1687 aa		31.7	■■■□□ 2.67
PCM1-209	ENST00000518930	KDM3B	Q7LBC6	1761 aa		31.7	■■■□□ 2.67
PCM1-209	ENST00000518930	WWC1	Q8IX03	1113 aa		31.69	■■■□□ 2.66
PCM1-209	ENST00000518930	SLC39A6	Q13433	755 aa		31.68	■■■□□ 2.66
PCM1-209	ENST00000518930	CAMKK2	Q96RR4	588 aa		31.68	■■■□□ 2.66
PCM1-209	ENST00000518930	EZH2	Q15910	746 aa	Known RBP	31.67	■■■□□ 2.66
PCM1-209	ENST00000518930	ZNF790	Q6PG37	636 aa		31.66	■■■□□ 2.66
PCM1-209	ENST00000518930	RBM42	Q9BTD8	480 aa	Known RBP	31.66	■■■□□ 2.66
PCM1-209	ENST00000518930	LAS1L	Q9Y4W2	734 aa	Known RBP	31.66	■■■□□ 2.66
PCM1-209	ENST00000518930	KCP	Q6ZWJ8	1503 aa		31.65	■■■□□ 2.66
PCM1-209	ENST00000518930	TXNRD1	Q16881	649 aa		31.65	■■■□□ 2.66
PCM1-209	ENST00000518930	SLC27A3	Q5K4L6	730 aa		31.65	■■■□□ 2.66
PCM1-209	ENST00000518930	TSPYL4	Q9UJ04	414 aa		31.65	■■■□□ 2.66
PCM1-209	ENST00000518930	CCNL1	Q9UK58	526 aa	Predicted RBP	31.65	■■■□□ 2.66
PCM1-209	ENST00000518930	ZNF831	Q5JPB2	1677 aa		31.64	■■■□□ 2.66
PCM1-209	ENST00000518930	NUP188	Q5SRE5	1749 aa		31.64	■■■□□ 2.66
PCM1-209	ENST00000518930	PTCD1	O75127	700 aa	Known RBP	31.64	■■■□□ 2.66
PCM1-209	ENST00000518930	BABAM1	Q9NWV8	329 aa		31.64	■■■□□ 2.66
PCM1-209	ENST00000518930	LOC102724428	A0A0B4J2F2	783 aa		31.63	■■■□□ 2.65
PCM1-209	ENST00000518930	SIK1	P57059	783 aa		31.63	■■■□□ 2.65
PCM1-209	ENST00000518930	MIS18A	Q9NYP9	233 aa		31.63	■■■□□ 2.65
PCM1-209	ENST00000518930	C5	P01031	1676 aa		31.61	■■■□□ 2.65
PCM1-209	ENST00000518930	HNRNPU	Q00839	825 aa	Known RBP eCLIP	31.61	■■■□□ 2.65
PCM1-209	ENST00000518930	IFT57	Q9NWB7	429 aa		31.61	■■■□□ 2.65
PCM1-209	ENST00000518930	CIC	Q96RK0	1608 aa	Predicted RBP	31.6	■■■□□ 2.65
PCM1-209	ENST00000518930	IL16	Q14005	1332 aa		31.6	■■■□□ 2.65
PCM1-209	ENST00000518930	GNAI1	P63096	354 aa		31.6	■■■□□ 2.65
PCM1-209	ENST00000518930	WDR63	Q8IWG1	891 aa		31.6	■■■□□ 2.65
PCM1-209	ENST00000518930	CFAP44	Q96MT7	982 aa		31.6	■■■□□ 2.65
PCM1-209	ENST00000518930	FMNL2	Q96PY5	1086 aa		31.6	■■■□□ 2.65
PCM1-209	ENST00000518930	TAF1L	Q8IZX4	1826 aa		31.59	■■■□□ 2.65
PCM1-209	ENST00000518930	ATP6V1A	P38606	617 aa		31.59	■■■□□ 2.65
PCM1-209	ENST00000518930	TJP1	Q07157	1748 aa		31.58	■■■□□ 2.65
PCM1-209	ENST00000518930	CHL1	O00533	1208 aa		31.58	■■■□□ 2.65
PCM1-209	ENST00000518930	KCNQ3	O43525	872 aa		31.58	■■■□□ 2.65
PCM1-209	ENST00000518930	PROM2	Q8N271	834 aa		31.58	■■■□□ 2.65
PCM1-209	ENST00000518930	HMGB2	P26583	209 aa	Known RBP	31.57	■■■□□ 2.64
PCM1-209	ENST00000518930	ZNF496	Q96IT1	587 aa	Predicted RBP	31.57	■■■□□ 2.64
PCM1-209	ENST00000518930	KCNQ4	P56696	695 aa		31.56	■■■□□ 2.64
PCM1-209	ENST00000518930	HEG1	Q9ULI3	1381 aa		31.56	■■■□□ 2.64
PCM1-209	ENST00000518930	ZNF521	Q96K83	1311 aa		31.55	■■■□□ 2.64
PCM1-209	ENST00000518930	VSIG10	Q8N0Z9	540 aa		31.55	■■■□□ 2.64
PCM1-209	ENST00000518930	LRRC4B	Q9NT99	713 aa		31.55	■■■□□ 2.64
PCM1-209	ENST00000518930	COL5A3	P25940	1745 aa	Predicted RBP	31.55	■■■□□ 2.64
PCM1-209	ENST00000518930	ZNF853	P0CG23	659 aa		31.54	■■■□□ 2.64
PCM1-209	ENST00000518930	MBIP	Q9NS73	344 aa		31.53	■■■□□ 2.64
PCM1-209	ENST00000518930	SLC4A9	Q96Q91	983 aa		31.52	■■■□□ 2.64
PCM1-209	ENST00000518930	C4B	P0C0L5	1744 aa		31.52	■■■□□ 2.64
PCM1-209	ENST00000518930	LAMB4	A4D0S4	1761 aa		31.51	■■■□□ 2.64
PCM1-209	ENST00000518930	EIF4A1	P60842	406 aa	Known RBP	31.51	■■■□□ 2.63
PCM1-209	ENST00000518930	ITPK1	Q13572	414 aa		31.51	■■■□□ 2.63
PCM1-209	ENST00000518930	GOLGA2	Q08379	1002 aa		31.49	■■■□□ 2.63
PCM1-209	ENST00000518930	MYH16	Q9H6N6	1097 aa		31.49	■■■□□ 2.63
PCM1-209	ENST00000518930	SNRPA1	P09661	255 aa	Known RBP	31.48	■■■□□ 2.63
PCM1-209	ENST00000518930	NBPF14	Q5TI25	921 aa		31.48	■■■□□ 2.63
PCM1-209	ENST00000518930	DNAJC10	Q8IXB1	793 aa		31.48	■■■□□ 2.63
PCM1-209	ENST00000518930	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.48	■■■□□ 2.63
PCM1-209	ENST00000518930	LINC00116	Q8NCU8	138 aa		31.47	■■■□□ 2.63
PCM1-209	ENST00000518930	TSR2	Q969E8	191 aa	Known RBP	31.47	■■■□□ 2.63
PCM1-209	ENST00000518930	STK32B	Q9NY57	414 aa		31.45	■■■□□ 2.63
PCM1-209	ENST00000518930	ZBED9	Q6R2W3	1325 aa		31.45	■■■□□ 2.62
PCM1-209	ENST00000518930	FANCI	Q9NVI1	1328 aa		31.45	■■■□□ 2.62
PCM1-209	ENST00000518930		E9PSI1	815 aa		31.44	■■■□□ 2.62
PCM1-209	ENST00000518930	STARD3NL	O95772	234 aa		31.44	■■■□□ 2.62
PCM1-209	ENST00000518930	AK7	Q96M32	723 aa		31.44	■■■□□ 2.62
PCM1-209	ENST00000518930	CNTNAP4	Q9C0A0	1308 aa		31.43	■■■□□ 2.62
PCM1-209	ENST00000518930	GIGYF1	O75420	1035 aa	Predicted RBP	31.42	■■■□□ 2.62
PCM1-209	ENST00000518930	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.42	■■■□□ 2.62
PCM1-209	ENST00000518930	SPINK5	Q9NQ38	1064 aa	Predicted RBP	31.42	■■■□□ 2.62
PCM1-209	ENST00000518930	PRAMEF22	A3QJZ6	481 aa		31.4	■■■□□ 2.62
PCM1-209	ENST00000518930	CYP19A1	P11511	503 aa	Predicted RBP	31.4	■■■□□ 2.62
PCM1-209	ENST00000518930	CRKL	P46109	303 aa	Known RBP	31.4	■■■□□ 2.62
PCM1-209	ENST00000518930	TUBGCP6	Q96RT7	1819 aa		31.4	■■■□□ 2.62
PCM1-209	ENST00000518930	ZNF827	Q17R98	1081 aa		31.39	■■■□□ 2.62
PCM1-209	ENST00000518930	KRT24	Q2M2I5	525 aa		31.39	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms