RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TRIM32Q13049 653 aa9.43□□□□□ -0.9
PABPC1-207ENST00000518716 CHIC2Q9UKJ5 165 aa9.43□□□□□ -0.9
PABPC1-207ENST00000518716 AMOTL2Q9Y2J4 779 aa9.43□□□□□ -0.9
PABPC1-207ENST00000518716 MST1RQ04912 1400 aa9.42□□□□□ -0.9
PABPC1-207ENST00000518716 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
PABPC1-207ENST00000518716 OATP04181 439 aa9.42□□□□□ -0.9
PABPC1-207ENST00000518716 RBM6P78332 1123 aaKnown RBP9.42□□□□□ -0.9
PABPC1-207ENST00000518716 SUZ12Q15022 739 aaKnown RBP9.42□□□□□ -0.9
PABPC1-207ENST00000518716 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
PABPC1-207ENST00000518716 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
PABPC1-207ENST00000518716 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
PABPC1-207ENST00000518716 ASXL1Q8IXJ9 1541 aa9.41□□□□□ -0.9
PABPC1-207ENST00000518716 ANKRD50Q9ULJ7 1429 aa9.41□□□□□ -0.9
PABPC1-207ENST00000518716 NUTM2BA6NNL0 878 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-207ENST00000518716 NUTM2EB1AL46 878 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-207ENST00000518716 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
PABPC1-207ENST00000518716 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
PABPC1-207ENST00000518716 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
PABPC1-207ENST00000518716 NUTM2AQ8IVF1 878 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-207ENST00000518716 LRRC59Q96AG4 307 aaKnown RBP9.41□□□□□ -0.9
PABPC1-207ENST00000518716 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-207ENST00000518716 GCC2Q8IWJ2 1684 aa9.41□□□□□ -0.9
PABPC1-207ENST00000518716 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
PABPC1-207ENST00000518716 MSS51Q4VC12 460 aa9.4□□□□□ -0.9
PABPC1-207ENST00000518716 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
PABPC1-207ENST00000518716 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
PABPC1-207ENST00000518716 NHSL1Q5SYE7 1610 aa9.4□□□□□ -0.9
PABPC1-207ENST00000518716 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
PABPC1-207ENST00000518716 FCHSD2O94868 740 aa9.39□□□□□ -0.91
PABPC1-207ENST00000518716 NUTM2DQ5VT03 806 aaPredicted RBP9.39□□□□□ -0.91
PABPC1-207ENST00000518716 RDH13Q8NBN7 331 aa9.39□□□□□ -0.91
PABPC1-207ENST00000518716 XRN1Q8IZH2 1706 aaKnown RBP9.39□□□□□ -0.91
PABPC1-207ENST00000518716 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
PABPC1-207ENST00000518716 TRPM2O94759 1503 aa9.38□□□□□ -0.91
PABPC1-207ENST00000518716 FECHP22830 423 aa9.38□□□□□ -0.91
PABPC1-207ENST00000518716 VEGFBP49765 207 aa9.38□□□□□ -0.91
PABPC1-207ENST00000518716 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-207ENST00000518716 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
PABPC1-207ENST00000518716 C8orf37Q96NL8 207 aa9.38□□□□□ -0.91
PABPC1-207ENST00000518716 UNC13BO14795 1591 aa9.37□□□□□ -0.91
PABPC1-207ENST00000518716 ARHGEF1Q92888 912 aaKnown RBP9.37□□□□□ -0.91
PABPC1-207ENST00000518716 IRF7Q92985 503 aa9.37□□□□□ -0.91
PABPC1-207ENST00000518716 LAMC1P11047 1609 aa9.37□□□□□ -0.91
PABPC1-207ENST00000518716 SETBP1Q9Y6X0 1596 aa9.37□□□□□ -0.91
PABPC1-207ENST00000518716 METP08581 1390 aa9.37□□□□□ -0.91
PABPC1-207ENST00000518716 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
PABPC1-207ENST00000518716 E9PCH4 1651 aa9.36□□□□□ -0.91
PABPC1-207ENST00000518716 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
PABPC1-207ENST00000518716 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-207ENST00000518716 EP400Q96L91 3159 aa9.35□□□□□ -0.91
PABPC1-207ENST00000518716 GCGRP47871 477 aa9.35□□□□□ -0.91
PABPC1-207ENST00000518716 NGLY1Q96IV0 654 aa9.35□□□□□ -0.91
PABPC1-207ENST00000518716 ADGRL3Q9HAR2 1447 aa9.35□□□□□ -0.91
PABPC1-207ENST00000518716 DAXXQ9UER7 740 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-207ENST00000518716 ATRNO75882 1429 aa9.34□□□□□ -0.91
PABPC1-207ENST00000518716 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
PABPC1-207ENST00000518716 H3BM21 787 aa9.34□□□□□ -0.91
PABPC1-207ENST00000518716 NPAS3Q8IXF0 933 aa9.34□□□□□ -0.91
PABPC1-207ENST00000518716 REPIN1Q9BWE0 567 aaKnown RBP9.34□□□□□ -0.91
PABPC1-207ENST00000518716 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
PABPC1-207ENST00000518716 BMP1P13497 986 aa9.33□□□□□ -0.92
PABPC1-207ENST00000518716 MMP16P51512 607 aa9.33□□□□□ -0.92
PABPC1-207ENST00000518716 SKOR1P84550 965 aa9.33□□□□□ -0.92
PABPC1-207ENST00000518716 TRIM46Q7Z4K8 759 aa9.33□□□□□ -0.92
PABPC1-207ENST00000518716 KCNV2Q8TDN2 545 aa9.33□□□□□ -0.92
PABPC1-207ENST00000518716 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
PABPC1-207ENST00000518716 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.33□□□□□ -0.92
PABPC1-207ENST00000518716 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
PABPC1-207ENST00000518716 PTCH1Q13635 1447 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 IQGAP3Q86VI3 1631 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 ADAMTS2O95450 1211 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
PABPC1-207ENST00000518716 CCDC125Q86Z20 511 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 USP21Q9UK80 565 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 ROCK1Q13464 1354 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 BCL9LQ86UU0 1499 aa9.32□□□□□ -0.92
PABPC1-207ENST00000518716 PRAG1Q86YV5 1406 aa9.31□□□□□ -0.92
PABPC1-207ENST00000518716 PAXIP1Q6ZW49 1069 aaPredicted RBP9.31□□□□□ -0.92
PABPC1-207ENST00000518716 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
PABPC1-207ENST00000518716 MYOM2P54296 1465 aa9.3□□□□□ -0.92
PABPC1-207ENST00000518716 NALCNQ8IZF0 1738 aa9.3□□□□□ -0.92
PABPC1-207ENST00000518716 NUP155O75694 1391 aa9.29□□□□□ -0.92
PABPC1-207ENST00000518716 FAM50AQ14320 339 aaKnown RBP9.29□□□□□ -0.92
PABPC1-207ENST00000518716 COL22A1Q8NFW1 1626 aaPredicted RBP9.29□□□□□ -0.92
PABPC1-207ENST00000518716 ROBO2Q9HCK4 1378 aa9.28□□□□□ -0.92
PABPC1-207ENST00000518716 NEXMIFQ5QGS0 1516 aa9.28□□□□□ -0.92
PABPC1-207ENST00000518716 ALDH1A1P00352 501 aa9.28□□□□□ -0.92
PABPC1-207ENST00000518716 DXOO77932 396 aaKnown RBP9.27□□□□□ -0.93
PABPC1-207ENST00000518716 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
PABPC1-207ENST00000518716 HIC1Q14526 733 aa9.27□□□□□ -0.93
PABPC1-207ENST00000518716 GJD4Q96KN9 370 aaPredicted RBP9.27□□□□□ -0.93
PABPC1-207ENST00000518716 GSK3AP49840 483 aa9.26□□□□□ -0.93
PABPC1-207ENST00000518716 PXDNQ92626 1479 aa9.26□□□□□ -0.93
PABPC1-207ENST00000518716 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-207ENST00000518716 WNT7BP56706 349 aa9.25□□□□□ -0.93
PABPC1-207ENST00000518716 SLIT2O94813 1529 aa9.25□□□□□ -0.93
PABPC1-207ENST00000518716 CAPN5O15484 640 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-207ENST00000518716 HAP1P54257 671 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-207ENST00000518716 PHOX2BQ99453 314 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms