RNA–Protein interactions for RNA: ENST00000518607.1

EFCAB2-214, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-214ENST00000518607 SCN11AQ9UI33 1791 aa30■■■□□ 2.39
EFCAB2-214ENST00000518607 DIAPH1O60610 1272 aaKnown RBP29.98■■■□□ 2.39
EFCAB2-214ENST00000518607 ATP6V1AP38606 617 aa29.98■■■□□ 2.39
EFCAB2-214ENST00000518607 LINC00116Q8NCU8 138 aa29.98■■■□□ 2.39
EFCAB2-214ENST00000518607 COL3A1P02461 1466 aaPredicted RBP29.98■■■□□ 2.39
EFCAB2-214ENST00000518607 CABP4P57796 275 aa29.97■■■□□ 2.39
EFCAB2-214ENST00000518607 KLHL34Q8N239 644 aa29.97■■■□□ 2.39
EFCAB2-214ENST00000518607 ITPK1Q13572 414 aa29.96■■■□□ 2.39
EFCAB2-214ENST00000518607 YY1P25490 414 aa29.95■■■□□ 2.39
EFCAB2-214ENST00000518607 SSFA2P28290 1259 aa29.95■■■□□ 2.39
EFCAB2-214ENST00000518607 MSL1Q68DK7 614 aa29.95■■■□□ 2.39
EFCAB2-214ENST00000518607 COL5A3P25940 1745 aaPredicted RBP29.95■■■□□ 2.38
EFCAB2-214ENST00000518607 PHF14O94880 888 aa29.94■■■□□ 2.38
EFCAB2-214ENST00000518607 HMOX1P09601 288 aa29.94■■■□□ 2.38
EFCAB2-214ENST00000518607 CNGB1Q14028 1251 aaPredicted RBP29.94■■■□□ 2.38
EFCAB2-214ENST00000518607 VIRMAQ69YN4 1812 aaKnown RBP29.94■■■□□ 2.38
EFCAB2-214ENST00000518607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.93■■■□□ 2.38
EFCAB2-214ENST00000518607 AKAP4Q5JQC9 854 aa29.93■■■□□ 2.38
EFCAB2-214ENST00000518607 AMIGO3Q86WK7 504 aa29.93■■■□□ 2.38
EFCAB2-214ENST00000518607 UTRNP46939 3433 aa29.93■■■□□ 2.38
EFCAB2-214ENST00000518607 GNPATO15228 680 aa29.91■■■□□ 2.38
EFCAB2-214ENST00000518607 RBM42Q9BTD8 480 aaKnown RBP29.91■■■□□ 2.38
EFCAB2-214ENST00000518607 MRC1P22897 1456 aa29.9■■■□□ 2.38
EFCAB2-214ENST00000518607 CICQ96RK0 1608 aaPredicted RBP29.89■■■□□ 2.38
EFCAB2-214ENST00000518607 CHD4Q14839 1912 aa29.88■■■□□ 2.37
EFCAB2-214ENST00000518607 ADAMTS7Q9UKP4 1686 aa29.88■■■□□ 2.37
EFCAB2-214ENST00000518607 NFATC2IPQ8NCF5 419 aa29.87■■■□□ 2.37
EFCAB2-214ENST00000518607 SLC4A9Q96Q91 983 aa29.87■■■□□ 2.37
EFCAB2-214ENST00000518607 CNTNAP4Q9C0A0 1308 aa29.85■■■□□ 2.37
EFCAB2-214ENST00000518607 GOLGB1Q14789 3259 aaKnown RBP29.84■■■□□ 2.37
EFCAB2-214ENST00000518607 SMIM5Q71RC9 77 aa29.84■■■□□ 2.37
EFCAB2-214ENST00000518607 NLGN2Q8NFZ4 835 aa29.84■■■□□ 2.37
EFCAB2-214ENST00000518607 TJP1Q07157 1748 aa29.84■■■□□ 2.37
EFCAB2-214ENST00000518607 U2SURPO15042 1029 aaKnown RBP29.83■■■□□ 2.37
EFCAB2-214ENST00000518607 CFAP53Q96M91 514 aa29.83■■■□□ 2.37
EFCAB2-214ENST00000518607 SLC52A2Q9HAB3 445 aa29.83■■■□□ 2.37
EFCAB2-214ENST00000518607 RTCBQ9Y3I0 505 aaKnown RBP29.83■■■□□ 2.37
EFCAB2-214ENST00000518607 GPR162Q16538 588 aa29.82■■■□□ 2.36
EFCAB2-214ENST00000518607 MTHFSDQ2M296 383 aaKnown RBP29.82■■■□□ 2.36
EFCAB2-214ENST00000518607 RC3H1Q5TC82 1133 aaKnown RBP29.82■■■□□ 2.36
EFCAB2-214ENST00000518607 MYH14Q7Z406 1995 aaKnown RBP29.82■■■□□ 2.36
EFCAB2-214ENST00000518607 RNMTO43148 476 aaKnown RBP29.81■■■□□ 2.36
EFCAB2-214ENST00000518607 PTCD1O75127 700 aaKnown RBP29.81■■■□□ 2.36
EFCAB2-214ENST00000518607 ADRA2BP18089 450 aa29.8■■■□□ 2.36
EFCAB2-214ENST00000518607 C4AP0C0L4 1744 aa29.79■■■□□ 2.36
EFCAB2-214ENST00000518607 LGR6Q9HBX8 967 aa29.79■■■□□ 2.36
EFCAB2-214ENST00000518607 CD2APQ9Y5K6 639 aa29.79■■■□□ 2.36
EFCAB2-214ENST00000518607 TRAPPC3LQ5T215 181 aa29.77■■■□□ 2.36
EFCAB2-214ENST00000518607 PELP1Q8IZL8 1130 aaKnown RBP29.77■■■□□ 2.36
EFCAB2-214ENST00000518607 GAS2L2Q8NHY3 880 aa29.76■■■□□ 2.35
EFCAB2-214ENST00000518607 RPS6KA4O75676 772 aa29.75■■■□□ 2.35
EFCAB2-214ENST00000518607 PPP2R1AP30153 589 aa29.75■■■□□ 2.35
EFCAB2-214ENST00000518607 CRKLP46109 303 aaKnown RBP29.74■■■□□ 2.35
EFCAB2-214ENST00000518607 NUDCQ9Y266 331 aa29.74■■■□□ 2.35
EFCAB2-214ENST00000518607 KCPQ6ZWJ8 1503 aa29.74■■■□□ 2.35
EFCAB2-214ENST00000518607 UBR2Q8IWV8 1755 aa29.74■■■□□ 2.35
EFCAB2-214ENST00000518607 RFC4P35249 363 aa29.71■■■□□ 2.35
EFCAB2-214ENST00000518607 ARHGEF1Q92888 912 aaKnown RBP29.71■■■□□ 2.35
EFCAB2-214ENST00000518607 MMP10P09238 476 aa29.7■■■□□ 2.35
EFCAB2-214ENST00000518607 SIPA1L3O60292 1781 aaPredicted RBP29.69■■■□□ 2.34
EFCAB2-214ENST00000518607 GNAT3A8MTJ3 354 aa29.69■■■□□ 2.34
EFCAB2-214ENST00000518607 PRKAR2BP31323 418 aa29.69■■■□□ 2.34
EFCAB2-214ENST00000518607 SLC39A6Q13433 755 aa29.69■■■□□ 2.34
EFCAB2-214ENST00000518607 NLGN1Q8N2Q7 840 aa29.69■■■□□ 2.34
EFCAB2-214ENST00000518607 RSPH6AQ9H0K4 717 aa29.69■■■□□ 2.34
EFCAB2-214ENST00000518607 KIF13BQ9NQT8 1826 aa29.68■■■□□ 2.34
EFCAB2-214ENST00000518607 GRIN3BO60391 1043 aa29.67■■■□□ 2.34
EFCAB2-214ENST00000518607 GYS1P13807 737 aa29.66■■■□□ 2.34
EFCAB2-214ENST00000518607 YBX3P16989 372 aaKnown RBP eCLIP29.66■■■□□ 2.34
EFCAB2-214ENST00000518607 DNAJC10Q8IXB1 793 aa29.66■■■□□ 2.34
EFCAB2-214ENST00000518607 U2AF1L5P0DN76 240 aaPredicted RBP29.65■■■□□ 2.34
EFCAB2-214ENST00000518607 U2AF1Q01081 240 aaKnown RBP eCLIP29.65■■■□□ 2.34
EFCAB2-214ENST00000518607 TEFQ10587 303 aa29.65■■■□□ 2.34
EFCAB2-214ENST00000518607 TTC5Q8N0Z6 440 aa29.64■■■□□ 2.34
EFCAB2-214ENST00000518607 VSIG10Q8N0Z9 540 aa29.64■■■□□ 2.34
EFCAB2-214ENST00000518607 CCDC87Q9NVE4 849 aa29.64■■■□□ 2.34
EFCAB2-214ENST00000518607 INTS5Q6P9B9 1019 aaKnown RBP29.63■■■□□ 2.33
EFCAB2-214ENST00000518607 USP42Q9H9J4 1324 aaKnown RBP29.63■■■□□ 2.33
EFCAB2-214ENST00000518607 CEMIPQ8WUJ3 1361 aa29.63■■■□□ 2.33
EFCAB2-214ENST00000518607 ZNF784Q8NCA9 323 aaPredicted RBP29.62■■■□□ 2.33
EFCAB2-214ENST00000518607 PHACTR3Q96KR7 559 aa29.62■■■□□ 2.33
EFCAB2-214ENST00000518607 C10orf71Q711Q0 1435 aa29.62■■■□□ 2.33
EFCAB2-214ENST00000518607 CYP19A1P11511 503 aaPredicted RBP29.61■■■□□ 2.33
EFCAB2-214ENST00000518607 IL17REQ8NFR9 667 aa29.61■■■□□ 2.33
EFCAB2-214ENST00000518607 FCHSD2O94868 740 aa29.6■■■□□ 2.33
EFCAB2-214ENST00000518607 SOS1Q07889 1333 aaPredicted RBP29.6■■■□□ 2.33
EFCAB2-214ENST00000518607 KIAA1551Q9HCM1 1747 aa29.59■■■□□ 2.33
EFCAB2-214ENST00000518607 PXDNLA1KZ92 1463 aa29.58■■■□□ 2.33
EFCAB2-214ENST00000518607 PARP3Q9Y6F1 533 aa29.58■■■□□ 2.33
EFCAB2-214ENST00000518607 COL15A1P39059 1388 aa29.57■■■□□ 2.32
EFCAB2-214ENST00000518607 ZNF790Q6PG37 636 aa29.57■■■□□ 2.32
EFCAB2-214ENST00000518607 SRP68Q9UHB9 627 aaKnown RBP29.57■■■□□ 2.32
EFCAB2-214ENST00000518607 N4BP2Q86UW6 1770 aaPredicted RBP29.55■■■□□ 2.32
EFCAB2-214ENST00000518607 ZBTB1Q9Y2K1 713 aa29.55■■■□□ 2.32
EFCAB2-214ENST00000518607 HEG1Q9ULI3 1381 aa29.54■■■□□ 2.32
EFCAB2-214ENST00000518607 ZPR1O75312 459 aa29.54■■■□□ 2.32
EFCAB2-214ENST00000518607 STARD3NLO95772 234 aa29.53■■■□□ 2.32
EFCAB2-214ENST00000518607 TGFB2P61812 414 aa29.53■■■□□ 2.32
EFCAB2-214ENST00000518607 FKBP8Q14318 412 aa29.53■■■□□ 2.32
EFCAB2-214ENST00000518607 RTF1Q92541 710 aaKnown RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms