RNA–Protein interactions for RNA: ENST00000518423.1

IGKV2D-38-201, Transcript of immunoglobulin kappa variable 2D-38 (pseudogene), humanhuman

BASIC

Gene IGKV2D-38, Length 240 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-38-201ENST00000518423 KDM6AO15550 1401 aaPredicted RBP9.13□□□□□ -0.95
IGKV2D-38-201ENST00000518423 PAPPAQ13219 1627 aa9.13□□□□□ -0.95
IGKV2D-38-201ENST00000518423 CASZ1Q86V15 1759 aa9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 WDR43Q15061 677 aaKnown RBP eCLIP9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 AKAP4Q5JQC9 854 aa9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 DCAF5Q96JK2 942 aa9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 SPON1Q9HCB6 807 aa9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 MAP3K5Q99683 1374 aa9.12□□□□□ -0.95
IGKV2D-38-201ENST00000518423 C4BP0C0L5 1744 aa9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 TAF1LQ8IZX4 1826 aa9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 ZNF316A6NFI3 1004 aaPredicted RBP9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 TEFQ10587 303 aa9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 SMIM5Q71RC9 77 aa9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 GAS2L2Q8NHY3 880 aa9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 RTF1Q92541 710 aaKnown RBP9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 ZNF330Q9Y3S2 320 aaPredicted RBP9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 KDRP35968 1356 aa9.11□□□□□ -0.95
IGKV2D-38-201ENST00000518423 MYBBP1AQ9BQG0 1328 aaKnown RBP9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 LOC102724428A0A0B4J2F2 783 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 GNPATO15228 680 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 SIK1P57059 783 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 SLC39A6Q13433 755 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 CCDC146Q8IYE0 955 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 PELP1Q8IZL8 1130 aaKnown RBP9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 TTC5Q8N0Z6 440 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 NFATC2IPQ8NCF5 419 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 LGR6Q9HBX8 967 aa9.1□□□□□ -0.95
IGKV2D-38-201ENST00000518423 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
IGKV2D-38-201ENST00000518423 RNMTO43148 476 aaKnown RBP9.09□□□□□ -0.95
IGKV2D-38-201ENST00000518423 NKX1-1Q15270 411 aaPredicted RBP9.09□□□□□ -0.95
IGKV2D-38-201ENST00000518423 RALBP1Q15311 655 aa9.09□□□□□ -0.95
IGKV2D-38-201ENST00000518423 RSPH6AQ9H0K4 717 aa9.09□□□□□ -0.95
IGKV2D-38-201ENST00000518423 ATG3Q9NT62 314 aa9.09□□□□□ -0.95
IGKV2D-38-201ENST00000518423 PNPLA7Q6ZV29 1317 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 GNAT3A8MTJ3 354 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 ERVV-2B6SEH9 535 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 POLD1P28340 1107 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 MCM10Q7L590 875 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 LINC00116Q8NCU8 138 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 PHACTR3Q96KR7 559 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 ARXQ96QS3 562 aa9.08□□□□□ -0.96
IGKV2D-38-201ENST00000518423 ANP32CO43423 234 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 DCTN1Q14203 1278 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 AKT1S1Q96B36 256 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 MTFR1LQ9H019 292 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 SLC52A2Q9HAB3 445 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 TJP1Q07157 1748 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 QSER1Q2KHR3 1735 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 DLG5Q8TDM6 1919 aa9.07□□□□□ -0.96
IGKV2D-38-201ENST00000518423 ITPK1Q13572 414 aa9.06□□□□□ -0.96
IGKV2D-38-201ENST00000518423 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
IGKV2D-38-201ENST00000518423 RRP7AQ9Y3A4 280 aaKnown RBP9.06□□□□□ -0.96
IGKV2D-38-201ENST00000518423 LAS1LQ9Y4W2 734 aaKnown RBP9.06□□□□□ -0.96
IGKV2D-38-201ENST00000518423 COL5A3P25940 1745 aaPredicted RBP9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 UBR3Q6ZT12 1888 aa9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 BTBD11A6QL63 1104 aa9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 COL23A1Q86Y22 540 aaPredicted RBP9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 THUMPD2Q9BTF0 503 aaKnown RBP9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 PNNQ9H307 717 aaKnown RBP9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 RTCBQ9Y3I0 505 aaKnown RBP9.05□□□□□ -0.96
IGKV2D-38-201ENST00000518423 MRC1P22897 1456 aa9.04□□□□□ -0.96
IGKV2D-38-201ENST00000518423 FCHSD2O94868 740 aa9.04□□□□□ -0.96
IGKV2D-38-201ENST00000518423 CANXP27824 592 aaKnown RBP9.04□□□□□ -0.96
IGKV2D-38-201ENST00000518423 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
IGKV2D-38-201ENST00000518423 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
IGKV2D-38-201ENST00000518423 RNF39Q9H2S5 420 aa9.04□□□□□ -0.96
IGKV2D-38-201ENST00000518423 PRKRIP1Q9H875 184 aaPredicted RBP9.04□□□□□ -0.96
IGKV2D-38-201ENST00000518423 C4AP0C0L4 1744 aa9.03□□□□□ -0.96
IGKV2D-38-201ENST00000518423 RFC4P35249 363 aa9.03□□□□□ -0.96
IGKV2D-38-201ENST00000518423 CRKLP46109 303 aaKnown RBP9.03□□□□□ -0.96
IGKV2D-38-201ENST00000518423 IL17REQ8NFR9 667 aa9.03□□□□□ -0.96
IGKV2D-38-201ENST00000518423 FHDC1Q9C0D6 1143 aaPredicted RBP9.03□□□□□ -0.96
IGKV2D-38-201ENST00000518423 MIS18AQ9NYP9 233 aa9.03□□□□□ -0.96
IGKV2D-38-201ENST00000518423 SIPA1L3O60292 1781 aaPredicted RBP9.03□□□□□ -0.96
IGKV2D-38-201ENST00000518423 KCPQ6ZWJ8 1503 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 HMGB2P26583 209 aaKnown RBP9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 PIP4K2AP48426 406 aaPredicted RBP9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 RIPK4P57078 832 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 NFE2L2Q16236 605 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 TRAPPC3LQ5T215 181 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 AMIGO3Q86WK7 504 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 FLAD1Q8NFF5 587 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 SLC4A9Q96Q91 983 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 MRS2Q9HD23 443 aa9.02□□□□□ -0.97
IGKV2D-38-201ENST00000518423 UBR2Q8IWV8 1755 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 ADAMTS7Q9UKP4 1686 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 NPHP1O15259 732 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 KCNQ3O43525 872 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 SLC4A2P04920 1241 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 SSFA2P28290 1259 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 PTGER2P43116 358 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 FMNL2Q96PY5 1086 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 CCDC87Q9NVE4 849 aa9.01□□□□□ -0.97
IGKV2D-38-201ENST00000518423 SRP68Q9UHB9 627 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms