RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 TUBGCP6Q96RT7 1819 aa33.01■■■□□ 2.87
PVT1-204ENST00000517525 RNMTO43148 476 aaKnown RBP33.01■■■□□ 2.87
PVT1-204ENST00000517525 ATP6V1AP38606 617 aa33.01■■■□□ 2.87
PVT1-204ENST00000517525 ITPK1Q13572 414 aa33.01■■■□□ 2.87
PVT1-204ENST00000517525 COL23A1Q86Y22 540 aaPredicted RBP33.01■■■□□ 2.87
PVT1-204ENST00000517525 GAS2L2Q8NHY3 880 aa33.01■■■□□ 2.87
PVT1-204ENST00000517525 RSPH6AQ9H0K4 717 aa33.01■■■□□ 2.87
PVT1-204ENST00000517525 C4BP0C0L5 1744 aa33■■■□□ 2.87
PVT1-204ENST00000517525 LINC00116Q8NCU8 138 aa33■■■□□ 2.87
PVT1-204ENST00000517525 SLC52A2Q9HAB3 445 aa33■■■□□ 2.87
PVT1-204ENST00000517525 SCN11AQ9UI33 1791 aa33■■■□□ 2.87
PVT1-204ENST00000517525 ADAMTS7Q9UKP4 1686 aa33■■■□□ 2.87
PVT1-204ENST00000517525 MRC1P22897 1456 aa32.99■■■□□ 2.87
PVT1-204ENST00000517525 SLC4A9Q96Q91 983 aa32.99■■■□□ 2.87
PVT1-204ENST00000517525 LGR6Q9HBX8 967 aa32.99■■■□□ 2.87
PVT1-204ENST00000517525 FCHSD2O94868 740 aa32.98■■■□□ 2.87
PVT1-204ENST00000517525 RALBP1Q15311 655 aa32.98■■■□□ 2.87
PVT1-204ENST00000517525 COL24A1Q17RW2 1714 aa32.98■■■□□ 2.87
PVT1-204ENST00000517525 AK7Q96M32 723 aa32.98■■■□□ 2.87
PVT1-204ENST00000517525 DDX10Q13206 875 aaKnown RBP32.97■■■□□ 2.87
PVT1-204ENST00000517525 SSFA2P28290 1259 aa32.95■■■□□ 2.87
PVT1-204ENST00000517525 PRKAR2BP31323 418 aa32.95■■■□□ 2.87
PVT1-204ENST00000517525 RC3H1Q5TC82 1133 aaKnown RBP32.95■■■□□ 2.87
PVT1-204ENST00000517525 U2AF1L5P0DN76 240 aaPredicted RBP32.94■■■□□ 2.86
PVT1-204ENST00000517525 U2AF1Q01081 240 aaKnown RBP eCLIP32.94■■■□□ 2.86
PVT1-204ENST00000517525 ARXQ96QS3 562 aa32.94■■■□□ 2.86
PVT1-204ENST00000517525 MAP3K5Q99683 1374 aa32.94■■■□□ 2.86
PVT1-204ENST00000517525 PHACTR3Q96KR7 559 aa32.93■■■□□ 2.86
PVT1-204ENST00000517525 RBM42Q9BTD8 480 aaKnown RBP32.93■■■□□ 2.86
PVT1-204ENST00000517525 GNAT3A8MTJ3 354 aa32.92■■■□□ 2.86
PVT1-204ENST00000517525 POLD1P28340 1107 aa32.91■■■□□ 2.86
PVT1-204ENST00000517525 AMIGO3Q86WK7 504 aa32.91■■■□□ 2.86
PVT1-204ENST00000517525 CNTNAP4Q9C0A0 1308 aa32.9■■■□□ 2.86
PVT1-204ENST00000517525 UBR3Q6ZT12 1888 aa32.89■■■□□ 2.86
PVT1-204ENST00000517525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.89■■■□□ 2.86
PVT1-204ENST00000517525 IL17REQ8NFR9 667 aa32.89■■■□□ 2.86
PVT1-204ENST00000517525 MSH5O43196 834 aa32.88■■■□□ 2.85
PVT1-204ENST00000517525 SYT17Q9BSW7 474 aa32.88■■■□□ 2.85
PVT1-204ENST00000517525 PTCD1O75127 700 aaKnown RBP32.87■■■□□ 2.85
PVT1-204ENST00000517525 FHDC1Q9C0D6 1143 aaPredicted RBP32.87■■■□□ 2.85
PVT1-204ENST00000517525 CICQ96RK0 1608 aaPredicted RBP32.87■■■□□ 2.85
PVT1-204ENST00000517525 CEMIPQ8WUJ3 1361 aa32.86■■■□□ 2.85
PVT1-204ENST00000517525 GNPATO15228 680 aa32.86■■■□□ 2.85
PVT1-204ENST00000517525 ADRA2BP18089 450 aa32.84■■■□□ 2.85
PVT1-204ENST00000517525 RPS6KA4O75676 772 aa32.82■■■□□ 2.84
PVT1-204ENST00000517525 VSIG10Q8N0Z9 540 aa32.82■■■□□ 2.84
PVT1-204ENST00000517525 RTCBQ9Y3I0 505 aaKnown RBP32.82■■■□□ 2.84
PVT1-204ENST00000517525 COL5A3P25940 1745 aaPredicted RBP32.82■■■□□ 2.84
PVT1-204ENST00000517525 HTATSF1O43719 755 aaKnown RBP32.81■■■□□ 2.84
PVT1-204ENST00000517525 PHF14O94880 888 aa32.8■■■□□ 2.84
PVT1-204ENST00000517525 TEFQ10587 303 aa32.8■■■□□ 2.84
PVT1-204ENST00000517525 MYBBP1AQ9BQG0 1328 aaKnown RBP32.79■■■□□ 2.84
PVT1-204ENST00000517525 KCPQ6ZWJ8 1503 aa32.79■■■□□ 2.84
PVT1-204ENST00000517525 SLC39A6Q13433 755 aa32.79■■■□□ 2.84
PVT1-204ENST00000517525 TRAPPC3LQ5T215 181 aa32.78■■■□□ 2.84
PVT1-204ENST00000517525 SMIM5Q71RC9 77 aa32.78■■■□□ 2.84
PVT1-204ENST00000517525 VIRMAQ69YN4 1812 aaKnown RBP32.78■■■□□ 2.84
PVT1-204ENST00000517525 CRKLP46109 303 aaKnown RBP32.77■■■□□ 2.84
PVT1-204ENST00000517525 PLEKHF1Q96S99 279 aa32.77■■■□□ 2.84
PVT1-204ENST00000517525 PNNQ9H307 717 aaKnown RBP32.77■■■□□ 2.84
PVT1-204ENST00000517525 MSL1Q68DK7 614 aa32.76■■■□□ 2.83
PVT1-204ENST00000517525 TJP1Q07157 1748 aa32.75■■■□□ 2.83
PVT1-204ENST00000517525 DCAF8L1A6NGE4 600 aa32.74■■■□□ 2.83
PVT1-204ENST00000517525 INTS5Q6P9B9 1019 aaKnown RBP32.74■■■□□ 2.83
PVT1-204ENST00000517525 ZNF790Q6PG37 636 aa32.74■■■□□ 2.83
PVT1-204ENST00000517525 DNAJC10Q8IXB1 793 aa32.74■■■□□ 2.83
PVT1-204ENST00000517525 ARHGEF1Q92888 912 aaKnown RBP32.74■■■□□ 2.83
PVT1-204ENST00000517525 MYH14Q7Z406 1995 aaKnown RBP32.74■■■□□ 2.83
PVT1-204ENST00000517525 TTC5Q8N0Z6 440 aa32.73■■■□□ 2.83
PVT1-204ENST00000517525 RTF1Q92541 710 aaKnown RBP32.73■■■□□ 2.83
PVT1-204ENST00000517525 NEFMP07197 916 aa32.72■■■□□ 2.83
PVT1-204ENST00000517525 CYP19A1P11511 503 aaPredicted RBP32.72■■■□□ 2.83
PVT1-204ENST00000517525 SIPA1L3O60292 1781 aaPredicted RBP32.72■■■□□ 2.83
PVT1-204ENST00000517525 UBR2Q8IWV8 1755 aa32.71■■■□□ 2.83
PVT1-204ENST00000517525 PRKRIP1Q9H875 184 aaPredicted RBP32.71■■■□□ 2.83
PVT1-204ENST00000517525 CCDC87Q9NVE4 849 aa32.7■■■□□ 2.83
PVT1-204ENST00000517525 NLGN1Q8N2Q7 840 aa32.69■■■□□ 2.82
PVT1-204ENST00000517525 CD2APQ9Y5K6 639 aa32.69■■■□□ 2.82
PVT1-204ENST00000517525 ZNF496Q96IT1 587 aaPredicted RBP32.68■■■□□ 2.82
PVT1-204ENST00000517525 TEX13AQ9BXU3 409 aaPredicted RBP32.68■■■□□ 2.82
PVT1-204ENST00000517525 RFC4P35249 363 aa32.67■■■□□ 2.82
PVT1-204ENST00000517525 HEG1Q9ULI3 1381 aa32.67■■■□□ 2.82
PVT1-204ENST00000517525 BTBD11A6QL63 1104 aa32.66■■■□□ 2.82
PVT1-204ENST00000517525 NFE2L2Q16236 605 aa32.66■■■□□ 2.82
PVT1-204ENST00000517525 MCM10Q7L590 875 aa32.66■■■□□ 2.82
PVT1-204ENST00000517525 FMNL2Q96PY5 1086 aa32.65■■■□□ 2.82
PVT1-204ENST00000517525 SOS1Q07889 1333 aaPredicted RBP32.65■■■□□ 2.82
PVT1-204ENST00000517525 STARD3NLO95772 234 aa32.64■■■□□ 2.82
PVT1-204ENST00000517525 GYS1P13807 737 aa32.64■■■□□ 2.82
PVT1-204ENST00000517525 USP42Q9H9J4 1324 aaKnown RBP32.61■■■□□ 2.81
PVT1-204ENST00000517525 MAPK8IP3Q9UPT6 1336 aa32.61■■■□□ 2.81
PVT1-204ENST00000517525 DCTN1Q14203 1278 aa32.6■■■□□ 2.81
PVT1-204ENST00000517525 TAF7Q15545 349 aaPredicted RBP32.6■■■□□ 2.81
PVT1-204ENST00000517525 NLGN2Q8NFZ4 835 aa32.6■■■□□ 2.81
PVT1-204ENST00000517525 MMP10P09238 476 aa32.59■■■□□ 2.81
PVT1-204ENST00000517525 KLHL34Q8N239 644 aa32.59■■■□□ 2.81
PVT1-204ENST00000517525 ZBTB1Q9Y2K1 713 aa32.59■■■□□ 2.81
PVT1-204ENST00000517525 ZNF316A6NFI3 1004 aaPredicted RBP32.58■■■□□ 2.81
PVT1-204ENST00000517525 KCNQ3O43525 872 aa32.58■■■□□ 2.81
PVT1-204ENST00000517525 C4AP0C0L4 1744 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms