RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 MPNDQ8N594 471 aa14.43□□□□□ -0.1
PCDHGA6-201ENST00000517434 PTCD1O75127 700 aaKnown RBP14.43□□□□□ -0.1
PCDHGA6-201ENST00000517434 SKIDA1Q1XH10 827 aa14.43□□□□□ -0.1
PCDHGA6-201ENST00000517434 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
PCDHGA6-201ENST00000517434 BICDL1Q6ZP65 573 aa14.42□□□□□ -0.1
PCDHGA6-201ENST00000517434 RIMS2Q9UQ26 1411 aa14.42□□□□□ -0.1
PCDHGA6-201ENST00000517434 RPRD2Q5VT52 1461 aaKnown RBP14.42□□□□□ -0.1
PCDHGA6-201ENST00000517434 MPRIPQ6WCQ1 1025 aa14.42□□□□□ -0.1
PCDHGA6-201ENST00000517434 INCENPQ9NQS7 918 aa14.42□□□□□ -0.1
PCDHGA6-201ENST00000517434 HYPKQ9NX55 129 aa14.42□□□□□ -0.1
PCDHGA6-201ENST00000517434 ZSCAN29Q8IWY8 852 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 LRRCC1Q9C099 1032 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 TBX22Q9Y458 520 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 LMTK3Q96Q04 1460 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 C11orf95C9JLR9 678 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 NEK4P51957 841 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 RPAP2Q8IXW5 612 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 NAP1L1P55209 391 aaKnown RBP14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 CDCA7Q9BWT1 371 aaPredicted RBP14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 FAM107BQ9H098 131 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 FIBPO43427 364 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 NME9Q86XW9 330 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 MYO6Q9UM54 1294 aa14.41□□□□□ -0.1
PCDHGA6-201ENST00000517434 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
PCDHGA6-201ENST00000517434 WDR62O43379 1518 aa14.4□□□□□ -0.1
PCDHGA6-201ENST00000517434 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
PCDHGA6-201ENST00000517434 DYDC1Q8WWB3 177 aa14.4□□□□□ -0.1
PCDHGA6-201ENST00000517434 ZRSR2Q15696 482 aaKnown RBP14.4□□□□□ -0.1
PCDHGA6-201ENST00000517434 SMARCE1Q969G3 411 aa14.4□□□□□ -0.1
PCDHGA6-201ENST00000517434 PUS7Q96PZ0 661 aaKnown RBP14.4□□□□□ -0.1
PCDHGA6-201ENST00000517434 ATF7IPQ6VMQ6 1270 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 ACEP12821 1306 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 WDR33Q9C0J8 1336 aaKnown RBP14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 TXLNAP40222 546 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 TRIM22Q8IYM9 498 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 ITSN2Q9NZM3 1697 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 PPP1R42Q7Z4L9 355 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 DBF4Q9UBU7 674 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 PPP4R3BQ5MIZ7 849 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 RAI14Q9P0K7 980 aa14.39□□□□□ -0.11
PCDHGA6-201ENST00000517434 GOLGA6L10A6NI86 522 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 ANKRD1Q15327 319 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 GPATCH11Q8N954 259 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 LRP2BPQ9P2M1 347 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 CDC5LQ99459 802 aaKnown RBP14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 SOGA3Q5TF21 947 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 ANKRD24Q8TF21 1146 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 PRIMPOLQ96LW4 560 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 TRERF1Q96PN7 1200 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 GBP3Q9H0R5 595 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 NUP160Q12769 1436 aa14.38□□□□□ -0.11
PCDHGA6-201ENST00000517434 RFC4P35249 363 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 METTL24Q5JXM2 366 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 DUSP27Q5VZP5 1158 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 CCDC102AQ96A19 550 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 GTPBP4Q9BZE4 634 aaKnown RBP14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 NOB1Q9ULX3 412 aaKnown RBP14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 SRGAP3O43295 1099 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 ATP2B2Q01814 1243 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 TTLL5Q6EMB2 1281 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 CENPHQ9H3R5 247 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 ZMYM3Q14202 1370 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 ANKRD36BQ8N2N9 1353 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 POLD1P28340 1107 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 FILIP1LQ4L180 1135 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 CCDC184Q52MB2 194 aa14.37□□□□□ -0.11
PCDHGA6-201ENST00000517434 ST5P78524 1137 aa14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 IFIT5Q13325 482 aaKnown RBP14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 DDB1Q16531 1140 aa14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 FILIP1Q7Z7B0 1213 aa14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 TRMT112Q9UI30 125 aaKnown RBP14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 ATP10AO60312 1499 aa14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 LDHCP07864 332 aa14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 ZCRB1Q8TBF4 217 aaKnown RBP14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 TCOF1Q13428 1488 aaKnown RBP14.36□□□□□ -0.11
PCDHGA6-201ENST00000517434 SAMD9Q5K651 1589 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 CDK5RAP3Q96JB5 506 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 KRT32Q14532 448 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 PTPN14Q15678 1187 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 ANKIB1Q9P2G1 1089 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 MAGI3Q5TCQ9 1506 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 SHTN1A0MZ66 631 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 RAB11FIP3O75154 756 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 GTF2F1P35269 517 aaKnown RBP eCLIP14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 JMYQ8N9B5 988 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 KIF18AQ8NI77 898 aa14.35□□□□□ -0.11
PCDHGA6-201ENST00000517434 CDKL5O76039 1030 aa14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 SLC5A1P13866 664 aa14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 TMEM132AQ24JP5 1023 aa14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 ALDH1L2Q3SY69 923 aa14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 IPO4Q8TEX9 1081 aaKnown RBP14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 C8orf37Q96NL8 207 aa14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 ANKRD18BA2A2Z9 1011 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms