RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CITED4Q96RK1 184 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 PRKD2Q9BZL6 878 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 U2SURPO15042 1029 aaKnown RBP5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 EIF3JO75822 258 aaKnown RBP5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 NPR3P17342 541 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 WEE1P30291 646 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 PTK2Q05397 1052 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 DESI1Q6ICB0 168 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 USP48Q86UV5 1035 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 NEUROD4Q9HD90 331 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 CYLDQ9NQC7 956 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 CCDC87Q9NVE4 849 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 DOLKQ9UPQ8 538 aa5.33□□□□□ -1.56
RNU4-60P-201ENST00000517239 TRIM6-TRIM34B2RNG4 842 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 HMGB1P1B2RPK0 211 aaPredicted RBP5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 CREB3O43889 395 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 NEFLP07196 543 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 FGRP09769 529 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 ATP6V1AP38606 617 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 FAM50AQ14320 339 aaKnown RBP5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 SWT1Q5T5J6 900 aaKnown RBP5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 SPTY2D1Q68D10 685 aaPredicted RBP5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 PIP4P2Q8N4L2 257 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 STAG1Q8WVM7 1258 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 CCDC136Q96JN2 1154 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 DMRTB1Q96MA1 342 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 CCDC85AQ96PX6 553 aaPredicted RBP5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 PRR12Q9ULL5 1215 aa5.32□□□□□ -1.56
RNU4-60P-201ENST00000517239 ENPP3O14638 875 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 ZBTB24O43167 697 aaPredicted RBP5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 GALR2O43603 387 aaPredicted RBP5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 CHMP4BP1P59074 171 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 BIRC2Q13490 618 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 TSEN2Q8NCE0 465 aaKnown RBP5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 JDP2Q8WYK2 163 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 RNPC3Q96LT9 517 aaKnown RBP5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 NIF3L1Q9GZT8 377 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 UBA5Q9GZZ9 404 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 SLKQ9H2G2 1235 aaPredicted RBP5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 SRA1Q9HD15 236 aaKnown RBP5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 MAP10Q9P2G4 905 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 PCDHGA11Q9Y5H2 935 aa5.31□□□□□ -1.56
RNU4-60P-201ENST00000517239 PNMA6FA0A0J9YX94 578 aa5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 SH3BP5O60239 455 aa5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 ATF4P18848 351 aaPredicted RBP5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 CTHP32929 405 aa5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 FOXD4L6Q3SYB3 417 aaPredicted RBP5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 ALG1LQ6GMV1 187 aa5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 FOXD4L3Q6VB84 417 aaPredicted RBP5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 EVI5LQ96CN4 794 aa5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 SRPK1Q96SB4 655 aaKnown RBP5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 TERF2IPQ9NYB0 399 aa5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 AK5Q9Y6K8 562 aa5.3□□□□□ -1.56
RNU4-60P-201ENST00000517239 GPR182O15218 404 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 FZD6O60353 706 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 SEC24BO95487 1268 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 PDGFRBP09619 1106 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 CTSHP09668 335 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 NUDT7P0C024 238 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 GNA15P30679 374 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 TBX4P57082 545 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 RHBDL3P58872 404 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 AMPD3Q01432 767 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 C3orf67Q6ZVT6 689 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 MKL1Q969V6 931 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 COL26A1Q96A83 441 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 GGT7Q9UJ14 662 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 GPSM3Q9Y4H4 160 aa5.29□□□□□ -1.56
RNU4-60P-201ENST00000517239 ATMINO43313 823 aaPredicted RBP5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 PRC1O43663 620 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 F12P00748 615 aaPredicted RBP5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 CFHP08603 1231 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 MZF1P28698 734 aaPredicted RBP5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 EIF1AXP47813 144 aaKnown RBP5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 HDGFP51858 240 aaKnown RBP5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 PAK2Q13177 524 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 SERINC3Q13530 473 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 ENOX2Q16206 610 aaKnown RBP5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 Q3C1V9 767 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 PLEKHG4Q58EX7 1191 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 RNF20Q5VTR2 975 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 ALKBH2Q6NS38 261 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 PDXDC2PQ6P474 469 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 TSHZ1Q6ZSZ6 1077 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 HS2ST1Q7LGA3 356 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 PRPF38AQ8NAV1 312 aaKnown RBP5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 ADAM32Q8TC27 787 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 CRELD1Q96HD1 420 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 RPS6KC1Q96S38 1066 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 OCSTAMPQ9BR26 566 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 PRKAB1Q9Y478 270 aa5.28□□□□□ -1.56
RNU4-60P-201ENST00000517239 MAFGO15525 162 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 SSBP05455 408 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 PTPREP23469 700 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 PAX3P23760 479 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 SLC4A3P48751 1232 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 SETQ01105 290 aaPredicted RBP5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 NBPF6Q5VWK0 638 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 ZBTB33Q86T24 672 aa5.27□□□□□ -1.57
RNU4-60P-201ENST00000517239 FERMT3Q86UX7 667 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms