RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 SLC43A3Q8NBI5 491 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 HELQQ8TDG4 1101 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 PURBQ96QR8 312 aaKnown RBP3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 EVA1BQ9NVM1 165 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 CUEDC1Q9NWM3 386 aaPredicted RBP3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 PRKAG2Q9UGJ0 569 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 PDZRN3Q9UPQ7 1066 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 M0R2N6 131 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 TREHO43280 583 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 FAM13AO94988 1023 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 S1PR4O95977 384 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 LDHBP07195 334 aaKnown RBP3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 ATP2B1P20020 1258 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 FGD1P98174 961 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 NAA30Q147X3 362 aaPredicted RBP3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 ZNF662Q6ZS27 426 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 TRIM67Q6ZTA4 783 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 TSEN2Q8NCE0 465 aaKnown RBP3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 GAS2L2Q8NHY3 880 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 DHX38Q92620 1227 aaKnown RBP3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 RNF34Q969K3 372 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 COL26A1Q96A83 441 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 THAP11Q96EK4 314 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 FAM161BQ96MY7 647 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 TGIF2Q9GZN2 237 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 CAPN10Q9HC96 672 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 CWC22Q9HCG8 908 aaKnown RBP3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 METTL5Q9NRN9 209 aaKnown RBP3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 PARP2Q9UGN5 583 aa3.75□□□□□ -1.81
SCARNA3-201ENST00000517097 NDUFB5O43674 189 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 SORBS3O60504 671 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 PRPF40AO75400 957 aaKnown RBP3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 MPSTP25325 297 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 GTF2F1P35269 517 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 SLC19A1P41440 591 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 MAPK8P45983 427 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 FANCCQ00597 558 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 PLCB3Q01970 1234 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 DSC3Q14574 896 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 LIAT1Q6ZQX7 453 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 SH3BP5LQ7L8J4 393 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 TMC4Q7Z404 712 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 SCUBE3Q8IX30 993 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 ANKLE1Q8NAG6 615 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 DUSP9Q99956 384 aaKnown RBP3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 POLR3GLQ9BT43 218 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 CCSER2Q9H7U1 834 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 MRS2Q9HD23 443 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 RNF19AQ9NV58 838 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 NLRP2Q9NX02 1062 aa3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 TMA7Q9Y2S6 64 aaKnown RBP3.74□□□□□ -1.81
SCARNA3-201ENST00000517097 TLDC2A0PJX2 215 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 FOXO3O43524 673 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 ADH1BP00325 375 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 IGFBP4P22692 258 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 ITGAEP38570 1179 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 DAB2P98082 770 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 EHHADHQ08426 723 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 USP4Q13107 963 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 PSMD2Q13200 908 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 CCDC144BQ3MJ40 725 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 PLA2G2CQ5R387 149 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 RNF20Q5VTR2 975 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 SPRYD7Q5W111 196 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 TMC1Q8TDI8 760 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 ARMC5Q96C12 935 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 CITED4Q96RK1 184 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 NUDT12Q9BQG2 462 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 CARD14Q9BXL6 1004 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 ACBD3Q9H3P7 528 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 VTI1BQ9UEU0 232 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 WWC3Q9ULE0 1092 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 IQSEC3Q9UPP2 1182 aaPredicted RBP3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 SBNO2Q9Y2G9 1366 aa3.73□□□□□ -1.81
SCARNA3-201ENST00000517097 TTBK1Q5TCY1 1321 aaPredicted RBP3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 NR1I2O75469 434 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 DXOO77932 396 aaKnown RBP3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 IGHA2P01877 340 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 ZNF76P36508 570 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 TNNI2P48788 182 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 GNL2Q13823 731 aaKnown RBP3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 MSS51Q4VC12 460 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 SH3RF1Q7Z6J0 888 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 ZNF598Q86UK7 904 aaKnown RBP3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 GMLQ99445 158 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 SLC6A16Q9GZN6 736 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 CCDC87Q9NVE4 849 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 PCDHB11Q9Y5F2 797 aa3.72□□□□□ -1.81
SCARNA3-201ENST00000517097 MAGEB6P1A0A0J9YX57 407 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 GPR182O15218 404 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 FZD6O60353 706 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 DNAJA1P31689 397 aaKnown RBP3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 MMP16P51512 607 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 ATP2B2Q01814 1243 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 RBL2Q08999 1139 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 NBPF20Q3BBV1 942 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 ERFEQ4G0M1 354 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 ZNF697Q5TEC3 545 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms