RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 CHMP4BQ9H444 224 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.4-201ENST00000516969 RWDD1Q9H446 243 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.4-201ENST00000516969 SPG7Q9UQ90 795 aa6.9□□□□□ -1.3
SCARNA20.4-201ENST00000516969 HEG1Q9ULI3 1381 aa6.9□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PARP4Q9UKK3 1724 aaKnown RBP6.9□□□□□ -1.31
SCARNA20.4-201ENST00000516969 BTBD11A6QL63 1104 aa6.89□□□□□ -1.31
SCARNA20.4-201ENST00000516969 KCNQ3O43525 872 aa6.89□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PHKG2P15735 406 aa6.89□□□□□ -1.31
SCARNA20.4-201ENST00000516969 TEFQ10587 303 aa6.89□□□□□ -1.31
SCARNA20.4-201ENST00000516969 N4BP2Q86UW6 1770 aaPredicted RBP6.89□□□□□ -1.31
SCARNA20.4-201ENST00000516969 KAT6BQ8WYB5 2073 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 COL14A1Q05707 1796 aaKnown RBP6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 SHANK3Q9BYB0 1731 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 KDM6AO15550 1401 aaPredicted RBP6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 CYP27B1O15528 508 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 G2E3Q7L622 706 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 SKAP1Q86WV1 359 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 IFNL2Q8IZJ0 200 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 CHMP4AQ9BY43 222 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 SLC52A2Q9HAB3 445 aa6.88□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PHLPP1O60346 1717 aa6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 COL16A1Q07092 1604 aaPredicted RBP6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 MRC1P22897 1456 aa6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 GIGYF1O75420 1035 aaPredicted RBP6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 HSP90AB1P08238 724 aaKnown RBP6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 NKX1-1Q15270 411 aaPredicted RBP6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 LARP1Q6PKG0 1096 aaKnown RBP6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 TOM1L2Q6ZVM7 507 aa6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 SMC5Q8IY18 1101 aa6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 DCAF5Q96JK2 942 aa6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 STK31Q9BXU1 1019 aa6.87□□□□□ -1.31
SCARNA20.4-201ENST00000516969 CCT4P50991 539 aaKnown RBP6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 EVA1CP58658 441 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 FLIIQ13045 1269 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 HDGFL1Q5TGJ6 251 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 ZNF790Q6PG37 636 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 NFATC2IPQ8NCF5 419 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 ZCRB1Q8TBF4 217 aaKnown RBP6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 BACH2Q9BYV9 841 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PDZRN3Q9UPQ7 1066 aa6.86□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PCDH11XQ9BZA7 1347 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PCDH11YQ9BZA8 1340 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 ERVV-2B6SEH9 535 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 F6X3S4 739 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 TOM1O60784 492 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 IL2RBP14784 551 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PDE4AP27815 886 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 BTG4Q9NY30 223 aa6.85□□□□□ -1.31
SCARNA20.4-201ENST00000516969 C5P01031 1676 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 EIF2S2P20042 333 aaKnown RBP6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 NUCB1Q02818 461 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 SLC39A6Q13433 755 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 NECTIN2Q92692 538 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PHAXQ9H814 394 aaKnown RBP6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 DBF4Q9UBU7 674 aaPredicted RBP6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 ITGB4P16144 1822 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 UBR2Q8IWV8 1755 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 PXDNLA1KZ92 1463 aa6.84□□□□□ -1.31
SCARNA20.4-201ENST00000516969 DISP2A7MBM2 1401 aa6.84□□□□□ -1.32
SCARNA20.4-201ENST00000516969 PLCH1Q4KWH8 1693 aa6.84□□□□□ -1.32
SCARNA20.4-201ENST00000516969 WNK3Q9BYP7 1800 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 RGS3P49796 1198 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 CABP4P57796 275 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 FKBP5Q13451 457 aaPredicted RBP6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 PDIA6Q15084 440 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 RPAP2Q8IXW5 612 aaPredicted RBP6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 ANKRD44Q8N8A2 993 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 GCC1Q96CN9 775 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 MEIS3Q99687 375 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 DCTPP1Q9H773 170 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 C1orf115Q9H7X2 142 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 CHPF2Q9P2E5 772 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 NRAPQ86VF7 1730 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 ATP10DQ9P241 1426 aa6.83□□□□□ -1.32
SCARNA20.4-201ENST00000516969 GLI3P10071 1580 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 NWD2Q9ULI1 1742 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 TOGARAM1Q9Y4F4 1720 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 PRAMEF22A3QJZ6 481 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 SNRPA1P09661 255 aaKnown RBP6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 PROSER3Q2NL68 480 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 FAM161AQ3B820 660 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 CEP85Q6P2H3 762 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 SLC4A10Q6U841 1118 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 LRP10Q7Z4F1 713 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 ZNF496Q96IT1 587 aaPredicted RBP6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 USP44Q9H0E7 712 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 DDX21Q9NR30 783 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 HYPKQ9NX55 129 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 PAPPAQ13219 1627 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 IBTKQ9P2D0 1353 aaPredicted RBP6.82□□□□□ -1.32
SCARNA20.4-201ENST00000516969 PI4KAP2A4QPH2 592 aa6.81□□□□□ -1.32
SCARNA20.4-201ENST00000516969 GNAI3P08754 354 aa6.81□□□□□ -1.32
SCARNA20.4-201ENST00000516969 PIP4K2BP78356 416 aa6.81□□□□□ -1.32
SCARNA20.4-201ENST00000516969 BEND3Q5T5X7 828 aa6.81□□□□□ -1.32
SCARNA20.4-201ENST00000516969 KSR2Q6VAB6 950 aa6.81□□□□□ -1.32
SCARNA20.4-201ENST00000516969 CHD1LQ86WJ1 897 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms