RNA–Protein interactions for RNA: ENST00000515820.6

NKX6-1-202, Transcript of NK6 homeobox 1, humanhuman

TSL 3 BASIC

Gene NKX6-1, Length 2,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-202ENST00000515820 APBB1O00213 710 aa25.59■■□□□ 1.69
NKX6-1-202ENST00000515820 RTF1Q92541 710 aaKnown RBP25.58■■□□□ 1.69
NKX6-1-202ENST00000515820 TSPYL4Q9UJ04 414 aa25.58■■□□□ 1.69
NKX6-1-202ENST00000515820 MAP3K19Q56UN5 1328 aa25.58■■□□□ 1.69
NKX6-1-202ENST00000515820 TTC21AQ8NDW8 1320 aa25.58■■□□□ 1.68
NKX6-1-202ENST00000515820 FMN2Q9NZ56 1722 aa25.57■■□□□ 1.68
NKX6-1-202ENST00000515820 GNAI2P04899 355 aa25.56■■□□□ 1.68
NKX6-1-202ENST00000515820 MTHFSDQ2M296 383 aaKnown RBP25.56■■□□□ 1.68
NKX6-1-202ENST00000515820 G2E3Q7L622 706 aa25.56■■□□□ 1.68
NKX6-1-202ENST00000515820 ANP32BQ92688 251 aaKnown RBP25.56■■□□□ 1.68
NKX6-1-202ENST00000515820 SALL3Q9BXA9 1300 aa25.56■■□□□ 1.68
NKX6-1-202ENST00000515820 SBNO1A3KN83 1393 aa25.55■■□□□ 1.68
NKX6-1-202ENST00000515820 PKP1Q13835 747 aa25.55■■□□□ 1.68
NKX6-1-202ENST00000515820 FLT4P35916 1363 aa25.55■■□□□ 1.68
NKX6-1-202ENST00000515820 ZGPATQ8N5A5 531 aaKnown RBP25.54■■□□□ 1.68
NKX6-1-202ENST00000515820 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
NKX6-1-202ENST00000515820 SLC4A10Q6U841 1118 aa25.54■■□□□ 1.68
NKX6-1-202ENST00000515820 F6X3S4 739 aa25.53■■□□□ 1.68
NKX6-1-202ENST00000515820 FOXO3O43524 673 aa25.53■■□□□ 1.68
NKX6-1-202ENST00000515820 HTATSF1O43719 755 aaKnown RBP25.53■■□□□ 1.68
NKX6-1-202ENST00000515820 MCM2P49736 904 aa25.53■■□□□ 1.68
NKX6-1-202ENST00000515820 ZSCAN23Q3MJ62 389 aa25.53■■□□□ 1.68
NKX6-1-202ENST00000515820 ZDHHC9Q9Y397 364 aa25.53■■□□□ 1.68
NKX6-1-202ENST00000515820 TUBGCP6Q96RT7 1819 aa25.52■■□□□ 1.68
NKX6-1-202ENST00000515820 CAVIN1Q6NZI2 390 aaKnown RBP25.52■■□□□ 1.68
NKX6-1-202ENST00000515820 STK31Q9BXU1 1019 aa25.52■■□□□ 1.68
NKX6-1-202ENST00000515820 IGSF1Q8N6C5 1336 aa25.51■■□□□ 1.67
NKX6-1-202ENST00000515820 DIP2AQ14689 1571 aa25.51■■□□□ 1.67
NKX6-1-202ENST00000515820 LRRC37A3O60309 1634 aa25.51■■□□□ 1.67
NKX6-1-202ENST00000515820 GNAI3P08754 354 aa25.51■■□□□ 1.67
NKX6-1-202ENST00000515820 SOS1Q07889 1333 aaPredicted RBP25.5■■□□□ 1.67
NKX6-1-202ENST00000515820 UBE2Q2Q8WVN8 375 aa25.5■■□□□ 1.67
NKX6-1-202ENST00000515820 LRRCC1Q9C099 1032 aa25.5■■□□□ 1.67
NKX6-1-202ENST00000515820 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
NKX6-1-202ENST00000515820 ESYT1Q9BSJ8 1104 aa25.49■■□□□ 1.67
NKX6-1-202ENST00000515820 ANAPC15P60006 121 aa25.49■■□□□ 1.67
NKX6-1-202ENST00000515820 IL17RAQ96F46 866 aa25.49■■□□□ 1.67
NKX6-1-202ENST00000515820 ZSCAN30Q86W11 494 aa25.48■■□□□ 1.67
NKX6-1-202ENST00000515820 ATP8B2P98198 1209 aa25.48■■□□□ 1.67
NKX6-1-202ENST00000515820 CCDC30Q5VVM6 783 aa25.48■■□□□ 1.67
NKX6-1-202ENST00000515820 EXOC6BQ9Y2D4 811 aa25.48■■□□□ 1.67
NKX6-1-202ENST00000515820 FAM208AQ9UK61 1670 aaKnown RBP25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 NCLP19338 710 aaKnown RBP25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 MX1P20591 662 aa25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 MCCP23508 829 aa25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 FLIIQ13045 1269 aa25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 HS1BP3Q53T59 392 aa25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 C14orf37Q86TY3 774 aa25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 STAP2Q9UGK3 403 aa25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 CHD2O14647 1828 aaKnown RBP25.47■■□□□ 1.67
NKX6-1-202ENST00000515820 PRPF40AO75400 957 aaKnown RBP25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 TMX3Q96JJ7 454 aa25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 EYA1Q99502 592 aa25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 SRCIN1Q9C0H9 1055 aa25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 NEK4P51957 841 aa25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 CUL4AQ13619 759 aa25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 GPT2Q8TD30 523 aa25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 N4BP2Q86UW6 1770 aaPredicted RBP25.46■■□□□ 1.67
NKX6-1-202ENST00000515820 PXDNLA1KZ92 1463 aa25.45■■□□□ 1.66
NKX6-1-202ENST00000515820 CACNA1FO60840 1977 aa25.45■■□□□ 1.66
NKX6-1-202ENST00000515820 SOX12O15370 315 aa25.44■■□□□ 1.66
NKX6-1-202ENST00000515820 EPB41L2O43491 1005 aaKnown RBP25.44■■□□□ 1.66
NKX6-1-202ENST00000515820 INTS4Q96HW7 963 aaKnown RBP25.44■■□□□ 1.66
NKX6-1-202ENST00000515820 AOX1Q06278 1338 aa25.44■■□□□ 1.66
NKX6-1-202ENST00000515820 BABAM1Q9NWV8 329 aa25.44■■□□□ 1.66
NKX6-1-202ENST00000515820 STRCQ7RTU9 1775 aa25.43■■□□□ 1.66
NKX6-1-202ENST00000515820 CHMLP26374 656 aa25.43■■□□□ 1.66
NKX6-1-202ENST00000515820 PNMA6EA0A0J9YXQ4 647 aa25.42■■□□□ 1.66
NKX6-1-202ENST00000515820 FKBP5Q13451 457 aaPredicted RBP25.42■■□□□ 1.66
NKX6-1-202ENST00000515820 PDLIM2Q96JY6 352 aa25.42■■□□□ 1.66
NKX6-1-202ENST00000515820 RBSNQ9H1K0 784 aa25.42■■□□□ 1.66
NKX6-1-202ENST00000515820 AMPHP49418 695 aa25.42■■□□□ 1.66
NKX6-1-202ENST00000515820 BRD1O95696 1058 aa25.41■■□□□ 1.66
NKX6-1-202ENST00000515820 MBD3O95983 291 aa25.41■■□□□ 1.66
NKX6-1-202ENST00000515820 PRIM1P49642 420 aaKnown RBP25.41■■□□□ 1.66
NKX6-1-202ENST00000515820 PROSER2Q86WR7 435 aaPredicted RBP25.41■■□□□ 1.66
NKX6-1-202ENST00000515820 GNAT3A8MTJ3 354 aa25.41■■□□□ 1.66
NKX6-1-202ENST00000515820 TSHZ3Q63HK5 1081 aa25.4■■□□□ 1.66
NKX6-1-202ENST00000515820 LRSAM1Q6UWE0 723 aa25.39■■□□□ 1.66
NKX6-1-202ENST00000515820 PIK3C2AO00443 1686 aa25.39■■□□□ 1.66
NKX6-1-202ENST00000515820 STRCP1A6NGW2 1772 aa25.39■■□□□ 1.65
NKX6-1-202ENST00000515820 ZNF335Q9H4Z2 1342 aaPredicted RBP25.38■■□□□ 1.65
NKX6-1-202ENST00000515820 TPM2P07951 284 aa25.38■■□□□ 1.65
NKX6-1-202ENST00000515820 RGPD8O14715 1765 aaPredicted RBP25.38■■□□□ 1.65
NKX6-1-202ENST00000515820 TMEM63CQ9P1W3 806 aa25.38■■□□□ 1.65
NKX6-1-202ENST00000515820 PALD1Q9ULE6 856 aa25.38■■□□□ 1.65
NKX6-1-202ENST00000515820 MSNP26038 577 aaKnown RBP25.37■■□□□ 1.65
NKX6-1-202ENST00000515820 ANO2Q9NQ90 1003 aa25.37■■□□□ 1.65
NKX6-1-202ENST00000515820 RBM27Q9P2N5 1060 aaKnown RBP25.37■■□□□ 1.65
NKX6-1-202ENST00000515820 NGDNQ8NEJ9 315 aaKnown RBP25.37■■□□□ 1.65
NKX6-1-202ENST00000515820 LRRFIP2Q9Y608 721 aaKnown RBP25.37■■□□□ 1.65
NKX6-1-202ENST00000515820 TRIM6-TRIM34B2RNG4 842 aa25.36■■□□□ 1.65
NKX6-1-202ENST00000515820 RRP9O43818 475 aaKnown RBP25.36■■□□□ 1.65
NKX6-1-202ENST00000515820 RILPL2Q969X0 211 aa25.36■■□□□ 1.65
NKX6-1-202ENST00000515820 MAP3K5Q99683 1374 aa25.36■■□□□ 1.65
NKX6-1-202ENST00000515820 NWD1Q149M9 1564 aa25.36■■□□□ 1.65
NKX6-1-202ENST00000515820 USP44Q9H0E7 712 aa25.35■■□□□ 1.65
NKX6-1-202ENST00000515820 SSH3Q8TE77 659 aa25.35■■□□□ 1.65
NKX6-1-202ENST00000515820 OFD1O75665 1012 aa25.34■■□□□ 1.65
NKX6-1-202ENST00000515820 TAF7Q15545 349 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms