RNA–Protein interactions for RNA: ENST00000515749.1

SEC31A-241, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-241ENST00000515749 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
SEC31A-241ENST00000515749 ABCC6O95255 1503 aa9.73□□□□□ -0.85
SEC31A-241ENST00000515749 HTATSF1O43719 755 aaKnown RBP9.73□□□□□ -0.85
SEC31A-241ENST00000515749 NUTM2GQ5VZR2 741 aa9.73□□□□□ -0.85
SEC31A-241ENST00000515749 ARHGEF25Q86VW2 580 aa9.73□□□□□ -0.85
SEC31A-241ENST00000515749 PHACTR3Q96KR7 559 aa9.73□□□□□ -0.85
SEC31A-241ENST00000515749 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
SEC31A-241ENST00000515749 GNAI1P63096 354 aa9.72□□□□□ -0.85
SEC31A-241ENST00000515749 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
SEC31A-241ENST00000515749 EYA1Q99502 592 aa9.72□□□□□ -0.85
SEC31A-241ENST00000515749 IFT57Q9NWB7 429 aa9.72□□□□□ -0.85
SEC31A-241ENST00000515749 SPATA31A3Q5VYP0 1347 aa9.72□□□□□ -0.85
SEC31A-241ENST00000515749 PXDNQ92626 1479 aa9.72□□□□□ -0.85
SEC31A-241ENST00000515749 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
SEC31A-241ENST00000515749 LMOD2Q6P5Q4 547 aa9.71□□□□□ -0.86
SEC31A-241ENST00000515749 BRINP3Q76B58 766 aa9.71□□□□□ -0.86
SEC31A-241ENST00000515749 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
SEC31A-241ENST00000515749 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.86
SEC31A-241ENST00000515749 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
SEC31A-241ENST00000515749 MS4A1P11836 297 aa9.7□□□□□ -0.86
SEC31A-241ENST00000515749 AAMPQ13685 434 aa9.7□□□□□ -0.86
SEC31A-241ENST00000515749 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
SEC31A-241ENST00000515749 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
SEC31A-241ENST00000515749 SOS2Q07890 1332 aaPredicted RBP9.7□□□□□ -0.86
SEC31A-241ENST00000515749 PLEKHG2Q9H7P9 1386 aa9.7□□□□□ -0.86
SEC31A-241ENST00000515749 FAM208AQ9UK61 1670 aaKnown RBP9.7□□□□□ -0.86
SEC31A-241ENST00000515749 IRX6P78412 446 aaPredicted RBP9.69□□□□□ -0.86
SEC31A-241ENST00000515749 XPCQ01831 940 aaPredicted RBP9.69□□□□□ -0.86
SEC31A-241ENST00000515749 VARS2Q5ST30 1063 aaKnown RBP9.69□□□□□ -0.86
SEC31A-241ENST00000515749 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
SEC31A-241ENST00000515749 AEBP1Q8IUX7 1158 aa9.69□□□□□ -0.86
SEC31A-241ENST00000515749 FANCIQ9NVI1 1328 aa9.69□□□□□ -0.86
SEC31A-241ENST00000515749 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
SEC31A-241ENST00000515749 NCAPD2Q15021 1401 aa9.68□□□□□ -0.86
SEC31A-241ENST00000515749 CPDO75976 1380 aa9.68□□□□□ -0.86
SEC31A-241ENST00000515749 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
SEC31A-241ENST00000515749 MMRN1Q13201 1228 aa9.68□□□□□ -0.86
SEC31A-241ENST00000515749 ALDH1L2Q3SY69 923 aa9.68□□□□□ -0.86
SEC31A-241ENST00000515749 RTF1Q92541 710 aaKnown RBP9.68□□□□□ -0.86
SEC31A-241ENST00000515749 BABAM1Q9NWV8 329 aa9.68□□□□□ -0.86
SEC31A-241ENST00000515749 CAMTA1Q9Y6Y1 1673 aa9.67□□□□□ -0.86
SEC31A-241ENST00000515749 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
SEC31A-241ENST00000515749 AMOTQ4VCS5 1084 aa9.67□□□□□ -0.86
SEC31A-241ENST00000515749 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
SEC31A-241ENST00000515749 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
SEC31A-241ENST00000515749 COL18A1P39060 1754 aa9.67□□□□□ -0.86
SEC31A-241ENST00000515749 RGPD5Q99666 1765 aa9.67□□□□□ -0.86
SEC31A-241ENST00000515749 RGPD2P0DJD1 1756 aa9.66□□□□□ -0.86
SEC31A-241ENST00000515749 GNAT3A8MTJ3 354 aa9.66□□□□□ -0.86
SEC31A-241ENST00000515749 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
SEC31A-241ENST00000515749 MTHFSDQ2M296 383 aaKnown RBP9.66□□□□□ -0.86
SEC31A-241ENST00000515749 PLEKHO1Q53GL0 409 aaPredicted RBP9.66□□□□□ -0.86
SEC31A-241ENST00000515749 CCDC136Q96JN2 1154 aa9.66□□□□□ -0.86
SEC31A-241ENST00000515749 CACNA1FO60840 1977 aa9.66□□□□□ -0.86
SEC31A-241ENST00000515749 SOS1Q07889 1333 aaPredicted RBP9.65□□□□□ -0.86
SEC31A-241ENST00000515749 LTBP4Q8N2S1 1624 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 C2orf72A6NCS6 295 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 CHL1O00533 1208 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 IPO8O15397 1037 aaKnown RBP9.65□□□□□ -0.86
SEC31A-241ENST00000515749 ARSIQ5FYB1 569 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 ANKRD24Q8TF21 1146 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 LTV1Q96GA3 475 aaPredicted RBP9.65□□□□□ -0.86
SEC31A-241ENST00000515749 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
SEC31A-241ENST00000515749 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
SEC31A-241ENST00000515749 PLIN1O60240 522 aa9.64□□□□□ -0.87
SEC31A-241ENST00000515749 BCAR3O75815 825 aa9.64□□□□□ -0.87
SEC31A-241ENST00000515749 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
SEC31A-241ENST00000515749 TSR2Q969E8 191 aaKnown RBP9.64□□□□□ -0.87
SEC31A-241ENST00000515749 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
SEC31A-241ENST00000515749 CHMP4AQ9BY43 222 aa9.64□□□□□ -0.87
SEC31A-241ENST00000515749 MBIPQ9NS73 344 aa9.64□□□□□ -0.87
SEC31A-241ENST00000515749 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
SEC31A-241ENST00000515749 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 ZBTB7CA1YPR0 619 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 PPP1R37O75864 691 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 ZC3H6P61129 1189 aaKnown RBP9.63□□□□□ -0.87
SEC31A-241ENST00000515749 ZKSCAN2Q63HK3 967 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 EXOC6Q8TAG9 804 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 ARHGAP45Q92619 1136 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 DDX17Q92841 729 aaKnown RBP9.63□□□□□ -0.87
SEC31A-241ENST00000515749 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.873e-11■□□□□ 11
SEC31A-241ENST00000515749 LAS1LQ9Y4W2 734 aaKnown RBP9.63□□□□□ -0.87
SEC31A-241ENST00000515749 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
SEC31A-241ENST00000515749 AHDC1Q5TGY3 1603 aaPredicted RBP9.63□□□□□ -0.87
SEC31A-241ENST00000515749 VIRMAQ69YN4 1812 aaKnown RBP9.62□□□□□ -0.87
SEC31A-241ENST00000515749 VAMP4O75379 141 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 AKAP4Q5JQC9 854 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 CRBNQ96SW2 442 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
SEC31A-241ENST00000515749 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 LRRC37A3O60309 1634 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 CRB1P82279 1406 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 ABCA3Q99758 1704 aa9.62□□□□□ -0.87
SEC31A-241ENST00000515749 ROBO1Q9Y6N7 1651 aa9.61□□□□□ -0.87
SEC31A-241ENST00000515749 FAM83GA6ND36 823 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms