RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 LTV1Q96GA3 475 aaPredicted RBP15.78■□□□□ 0.12
PHF3-212ENST00000515594 NRXN3Q9Y4C0 1643 aa15.78■□□□□ 0.12
PHF3-212ENST00000515594 PTMSP20962 102 aa15.77■□□□□ 0.12
PHF3-212ENST00000515594 SLC26A8Q96RN1 970 aa15.77■□□□□ 0.12
PHF3-212ENST00000515594 PEAK1Q9H792 1746 aa15.77■□□□□ 0.12
PHF3-212ENST00000515594 PLEKHG5O94827 1062 aa15.77■□□□□ 0.11
PHF3-212ENST00000515594 CRB1P82279 1406 aa15.77■□□□□ 0.11
PHF3-212ENST00000515594 ESYT1Q9BSJ8 1104 aa15.76■□□□□ 0.11
PHF3-212ENST00000515594 LRRFIP2Q9Y608 721 aaKnown RBP15.76■□□□□ 0.11
PHF3-212ENST00000515594 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
PHF3-212ENST00000515594 MX1P20591 662 aa15.76■□□□□ 0.11
PHF3-212ENST00000515594 PTPRCP08575 1304 aa15.76■□□□□ 0.11
PHF3-212ENST00000515594 MON2Q7Z3U7 1717 aa15.75■□□□□ 0.11
PHF3-212ENST00000515594 C3P01024 1663 aa15.75■□□□□ 0.11
PHF3-212ENST00000515594 HMMRO75330 724 aa15.75■□□□□ 0.11
PHF3-212ENST00000515594 JARID2Q92833 1246 aaPredicted RBP15.75■□□□□ 0.11
PHF3-212ENST00000515594 GNAI2P04899 355 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 CPA1P15085 419 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 CWC22Q9HCG8 908 aaKnown RBP15.74■□□□□ 0.11
PHF3-212ENST00000515594 KIF24Q5T7B8 1368 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 IBTKQ9P2D0 1353 aaPredicted RBP15.74■□□□□ 0.11
PHF3-212ENST00000515594 FLIIQ13045 1269 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 USHBP1Q8N6Y0 703 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 LRRCC1Q9C099 1032 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 CHMLP26374 656 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
PHF3-212ENST00000515594 EYA1Q99502 592 aa15.74■□□□□ 0.11
PHF3-212ENST00000515594 RRP9O43818 475 aaKnown RBP15.73■□□□□ 0.11
PHF3-212ENST00000515594 ITSN1Q15811 1721 aa15.73■□□□□ 0.11
PHF3-212ENST00000515594 ZNF830Q96NB3 372 aaPredicted RBP15.73■□□□□ 0.11
PHF3-212ENST00000515594 PHAXQ9H814 394 aaKnown RBP15.73■□□□□ 0.11
PHF3-212ENST00000515594 FAM13BQ9NYF5 915 aa15.73■□□□□ 0.11
PHF3-212ENST00000515594 OFD1O75665 1012 aa15.72■□□□□ 0.11
PHF3-212ENST00000515594 LRSAM1Q6UWE0 723 aa15.72■□□□□ 0.11
PHF3-212ENST00000515594 REREQ9P2R6 1566 aa15.72■□□□□ 0.11
PHF3-212ENST00000515594 KIAA0232Q92628 1395 aa15.72■□□□□ 0.11
PHF3-212ENST00000515594 ANXA1P04083 346 aa15.72■□□□□ 0.11
PHF3-212ENST00000515594 SALL3Q9BXA9 1300 aa15.72■□□□□ 0.11
PHF3-212ENST00000515594 STK31Q9BXU1 1019 aa15.71■□□□□ 0.11
PHF3-212ENST00000515594 PDLIM2Q96JY6 352 aa15.71■□□□□ 0.11
PHF3-212ENST00000515594 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
PHF3-212ENST00000515594 CEP170BQ9Y4F5 1589 aaPredicted RBP15.71■□□□□ 0.11
PHF3-212ENST00000515594 BRD1O95696 1058 aa15.71■□□□□ 0.1
PHF3-212ENST00000515594 AMPHP49418 695 aa15.71■□□□□ 0.1
PHF3-212ENST00000515594 AKAP12Q02952 1782 aa15.7■□□□□ 0.1
PHF3-212ENST00000515594 C17orf53Q8N3J3 647 aaPredicted RBP15.7■□□□□ 0.1
PHF3-212ENST00000515594 CCT4P50991 539 aaKnown RBP15.7■□□□□ 0.1
PHF3-212ENST00000515594 OSBPL3Q9H4L5 887 aa15.7■□□□□ 0.1
PHF3-212ENST00000515594 SETD1BQ9UPS6 1966 aaKnown RBP15.7■□□□□ 0.1
PHF3-212ENST00000515594 EIF2S2P20042 333 aaKnown RBP15.69■□□□□ 0.1
PHF3-212ENST00000515594 NOL7Q9UMY1 257 aaKnown RBP15.69■□□□□ 0.1
PHF3-212ENST00000515594 OVOS2A0A0J9YW53 1432 aa15.69■□□□□ 0.1
PHF3-212ENST00000515594 OVOS2Q6IE36 1432 aa15.69■□□□□ 0.1
PHF3-212ENST00000515594 LTKP29376 864 aa15.69■□□□□ 0.1
PHF3-212ENST00000515594 ESF1Q9H501 851 aaKnown RBP15.69■□□□□ 0.1
PHF3-212ENST00000515594 TSC1Q92574 1164 aa15.69■□□□□ 0.1
PHF3-212ENST00000515594 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
PHF3-212ENST00000515594 USP48Q86UV5 1035 aa15.68■□□□□ 0.1
PHF3-212ENST00000515594 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
PHF3-212ENST00000515594 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
PHF3-212ENST00000515594 CEBPAP49715 358 aaPredicted RBP15.68■□□□□ 0.1
PHF3-212ENST00000515594 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
PHF3-212ENST00000515594 CNPY2Q9Y2B0 182 aa15.67■□□□□ 0.1
PHF3-212ENST00000515594 USP6P35125 1406 aa15.67■□□□□ 0.1
PHF3-212ENST00000515594 SURF6O75683 361 aaKnown RBP15.67■□□□□ 0.1
PHF3-212ENST00000515594 PTMAP06454 111 aaKnown RBP15.67■□□□□ 0.1
PHF3-212ENST00000515594 TPM2P07951 284 aa15.67■□□□□ 0.1
PHF3-212ENST00000515594 RASEFQ8IZ41 740 aa15.67■□□□□ 0.1
PHF3-212ENST00000515594 IL17REQ8NFR9 667 aa15.67■□□□□ 0.1
PHF3-212ENST00000515594 HAP1P54257 671 aaPredicted RBP15.66■□□□□ 0.1
PHF3-212ENST00000515594 ATP8B2P98198 1209 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 NGDNQ8NEJ9 315 aaKnown RBP15.66■□□□□ 0.1
PHF3-212ENST00000515594 ZKSCAN5Q9Y2L8 839 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 SPATA31D1Q6ZQQ2 1576 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 UQCRHLA0A096LP55 91 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 UQCRHP07919 91 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 COL9A3Q14050 684 aaPredicted RBP15.66■□□□□ 0.1
PHF3-212ENST00000515594 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.66■□□□□ 0.1
PHF3-212ENST00000515594 NBPF7P0C2Y1 421 aaPredicted RBP15.66■□□□□ 0.1
PHF3-212ENST00000515594 PLCB2Q00722 1185 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 CUL4AQ13619 759 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 CWC27Q6UX04 472 aaKnown RBP15.66■□□□□ 0.1
PHF3-212ENST00000515594 RBM33Q96EV2 1170 aaKnown RBP15.66■□□□□ 0.1
PHF3-212ENST00000515594 SRCIN1Q9C0H9 1055 aa15.66■□□□□ 0.1
PHF3-212ENST00000515594 FAM177BA6PVY3 158 aa15.65■□□□□ 0.1
PHF3-212ENST00000515594 LARGE1O95461 756 aa15.65■□□□□ 0.1
PHF3-212ENST00000515594 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
PHF3-212ENST00000515594 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
PHF3-212ENST00000515594 USP25Q9UHP3 1055 aa15.65■□□□□ 0.1
PHF3-212ENST00000515594 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
PHF3-212ENST00000515594 SOS1Q07889 1333 aaPredicted RBP15.64■□□□□ 0.09
PHF3-212ENST00000515594 MCCP23508 829 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 NLRP6P59044 892 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 GLIPR1L2Q4G1C9 344 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 TSPY26PQ9H489 355 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 FIBPO43427 364 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 KCNQ3O43525 872 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 CCDC30Q5VVM6 783 aa15.64■□□□□ 0.09
PHF3-212ENST00000515594 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.64■□□□□ 0.092e-7■■□□□ 14.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms