RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 ITGB4P16144 1822 aa12.96□□□□□ -0.33
RACK1-234ENST00000515417 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
RACK1-234ENST00000515417 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
RACK1-234ENST00000515417 ATG3Q9NT62 314 aa12.95□□□□□ -0.34
RACK1-234ENST00000515417 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
RACK1-234ENST00000515417 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
RACK1-234ENST00000515417 FCHSD2O94868 740 aa12.94□□□□□ -0.34
RACK1-234ENST00000515417 SLC27A3Q5K4L6 730 aa12.94□□□□□ -0.34
RACK1-234ENST00000515417 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
RACK1-234ENST00000515417 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
RACK1-234ENST00000515417 SMARCC1Q92922 1105 aaPredicted RBP12.94□□□□□ -0.34
RACK1-234ENST00000515417 ARXQ96QS3 562 aa12.94□□□□□ -0.34
RACK1-234ENST00000515417 C1QTNF8P60827 252 aa12.93□□□□□ -0.34
RACK1-234ENST00000515417 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
RACK1-234ENST00000515417 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
RACK1-234ENST00000515417 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 LY75O60449 1722 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
RACK1-234ENST00000515417 SIK1P57059 783 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 ITPK1Q13572 414 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 CCDC146Q8IYE0 955 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 SLC52A2Q9HAB3 445 aa12.92□□□□□ -0.34
RACK1-234ENST00000515417 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
RACK1-234ENST00000515417 MCM10Q7L590 875 aa12.91□□□□□ -0.34
RACK1-234ENST00000515417 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
RACK1-234ENST00000515417 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
RACK1-234ENST00000515417 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
RACK1-234ENST00000515417 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
RACK1-234ENST00000515417 MRC1P22897 1456 aa12.91□□□□□ -0.34
RACK1-234ENST00000515417 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
RACK1-234ENST00000515417 AMIGO3Q86WK7 504 aa12.9□□□□□ -0.34
RACK1-234ENST00000515417 TFCP2L1Q9NZI6 479 aa12.9□□□□□ -0.34
RACK1-234ENST00000515417 SCN11AQ9UI33 1791 aa12.89□□□□□ -0.35
RACK1-234ENST00000515417 ANP32CO43423 234 aa12.89□□□□□ -0.35
RACK1-234ENST00000515417 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
RACK1-234ENST00000515417 GPR162Q16538 588 aa12.89□□□□□ -0.35
RACK1-234ENST00000515417 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 TEFQ10587 303 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 NFE2L2Q16236 605 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
RACK1-234ENST00000515417 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
RACK1-234ENST00000515417 ADAMTS7Q9UKP4 1686 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 CHD4Q14839 1912 aa12.88□□□□□ -0.35
RACK1-234ENST00000515417 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
RACK1-234ENST00000515417 KCNQ3O43525 872 aa12.87□□□□□ -0.35
RACK1-234ENST00000515417 PHF14O94880 888 aa12.87□□□□□ -0.35
RACK1-234ENST00000515417 NEFMP07197 916 aa12.87□□□□□ -0.35
RACK1-234ENST00000515417 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
RACK1-234ENST00000515417 AK7Q96M32 723 aa12.87□□□□□ -0.35
RACK1-234ENST00000515417 C5P01031 1676 aa12.86□□□□□ -0.35
RACK1-234ENST00000515417 MSH5O43196 834 aa12.86□□□□□ -0.35
RACK1-234ENST00000515417 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.357e-61■□□□□ 10.4
RACK1-234ENST00000515417 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 GNPATO15228 680 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 COL23A1Q86Y22 540 aaPredicted RBP12.85□□□□□ -0.35
RACK1-234ENST00000515417 DNAJC10Q8IXB1 793 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
RACK1-234ENST00000515417 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
RACK1-234ENST00000515417 VIRMAQ69YN4 1812 aaKnown RBP12.83□□□□□ -0.35
RACK1-234ENST00000515417 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.35
RACK1-234ENST00000515417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
RACK1-234ENST00000515417 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
RACK1-234ENST00000515417 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
RACK1-234ENST00000515417 RIPK4P57078 832 aa12.83□□□□□ -0.36
RACK1-234ENST00000515417 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
RACK1-234ENST00000515417 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
RACK1-234ENST00000515417 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
RACK1-234ENST00000515417 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
RACK1-234ENST00000515417 WWC3Q9ULE0 1092 aa12.83□□□□□ -0.36
RACK1-234ENST00000515417 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
RACK1-234ENST00000515417 ZNF790Q6PG37 636 aa12.82□□□□□ -0.36
RACK1-234ENST00000515417 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
RACK1-234ENST00000515417 GIGYF1O75420 1035 aaPredicted RBP12.81□□□□□ -0.36
RACK1-234ENST00000515417 TJP1Q07157 1748 aa12.81□□□□□ -0.36
RACK1-234ENST00000515417 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
RACK1-234ENST00000515417 SIPA1L3O60292 1781 aaPredicted RBP12.81□□□□□ -0.36
RACK1-234ENST00000515417 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
RACK1-234ENST00000515417 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
RACK1-234ENST00000515417 APAF1O14727 1248 aa12.79□□□□□ -0.36
RACK1-234ENST00000515417 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
RACK1-234ENST00000515417 POLD1P28340 1107 aa12.79□□□□□ -0.36
RACK1-234ENST00000515417 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
RACK1-234ENST00000515417 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
RACK1-234ENST00000515417 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
RACK1-234ENST00000515417 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
RACK1-234ENST00000515417 RTCBQ9Y3I0 505 aaKnown RBP12.79□□□□□ -0.36
RACK1-234ENST00000515417 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms