RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 ZNF827Q17R98 1081 aa15.32■□□□□ 0.04
SUB1-213ENST00000515355 PDGFDQ9GZP0 370 aaPredicted RBP15.32■□□□□ 0.04
SUB1-213ENST00000515355 PLEKHG2Q9H7P9 1386 aa15.32■□□□□ 0.04
SUB1-213ENST00000515355 KDM6AO15550 1401 aaPredicted RBP15.32■□□□□ 0.04
SUB1-213ENST00000515355 NUP188Q5SRE5 1749 aa15.31■□□□□ 0.04
SUB1-213ENST00000515355 GNAT3A8MTJ3 354 aa15.31■□□□□ 0.04
SUB1-213ENST00000515355 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
SUB1-213ENST00000515355 ZBTB7AO95365 584 aa15.31■□□□□ 0.04
SUB1-213ENST00000515355 ATP6V1AP38606 617 aa15.31■□□□□ 0.04
SUB1-213ENST00000515355 RREB1Q92766 1687 aa15.31■□□□□ 0.04
SUB1-213ENST00000515355 LOC102724428A0A0B4J2F2 783 aa15.3■□□□□ 0.04
SUB1-213ENST00000515355 ANP32CO43423 234 aa15.3■□□□□ 0.04
SUB1-213ENST00000515355 SIK1P57059 783 aa15.3■□□□□ 0.04
SUB1-213ENST00000515355 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
SUB1-213ENST00000515355 SRCAPQ6ZRS2 3230 aa15.3■□□□□ 0.04
SUB1-213ENST00000515355 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
SUB1-213ENST00000515355 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
SUB1-213ENST00000515355 MAPK8IP3Q9UPT6 1336 aa15.29■□□□□ 0.04
SUB1-213ENST00000515355 TEFQ10587 303 aa15.29■□□□□ 0.04
SUB1-213ENST00000515355 SLC39A6Q13433 755 aa15.29■□□□□ 0.04
SUB1-213ENST00000515355 SLC52A2Q9HAB3 445 aa15.29■□□□□ 0.04
SUB1-213ENST00000515355 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
SUB1-213ENST00000515355 MAP3K5Q99683 1374 aa15.28■□□□□ 0.04
SUB1-213ENST00000515355 AK7Q96M32 723 aa15.28■□□□□ 0.04
SUB1-213ENST00000515355 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
SUB1-213ENST00000515355 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.04
SUB1-213ENST00000515355 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.04
SUB1-213ENST00000515355 DCTN1Q14203 1278 aa15.27■□□□□ 0.04
SUB1-213ENST00000515355 MCM10Q7L590 875 aa15.27■□□□□ 0.04
SUB1-213ENST00000515355 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.04
SUB1-213ENST00000515355 IL17REQ8NFR9 667 aa15.27■□□□□ 0.04
SUB1-213ENST00000515355 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
SUB1-213ENST00000515355 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
SUB1-213ENST00000515355 PPP1R1BQ9UD71 204 aaPredicted RBP15.27■□□□□ 0.04
SUB1-213ENST00000515355 PHF14O94880 888 aa15.26■□□□□ 0.03
SUB1-213ENST00000515355 ITPK1Q13572 414 aa15.26■□□□□ 0.03
SUB1-213ENST00000515355 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
SUB1-213ENST00000515355 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
SUB1-213ENST00000515355 SPON1Q9HCB6 807 aa15.26■□□□□ 0.03
SUB1-213ENST00000515355 ITGB4P16144 1822 aa15.26■□□□□ 0.03
SUB1-213ENST00000515355 TTC5Q8N0Z6 440 aa15.25■□□□□ 0.03
SUB1-213ENST00000515355 HMGB2P26583 209 aaKnown RBP15.24■□□□□ 0.03
SUB1-213ENST00000515355 DSG3P32926 999 aa15.24■□□□□ 0.03
SUB1-213ENST00000515355 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
SUB1-213ENST00000515355 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
SUB1-213ENST00000515355 GNPATO15228 680 aa15.23■□□□□ 0.03
SUB1-213ENST00000515355 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
SUB1-213ENST00000515355 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
SUB1-213ENST00000515355 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
SUB1-213ENST00000515355 ADAMTS8Q9UP79 889 aa15.23■□□□□ 0.03
SUB1-213ENST00000515355 RRP7AQ9Y3A4 280 aaKnown RBP15.23■□□□□ 0.03
SUB1-213ENST00000515355 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
SUB1-213ENST00000515355 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
SUB1-213ENST00000515355 RIPK4P57078 832 aa15.21■□□□□ 0.03
SUB1-213ENST00000515355 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
SUB1-213ENST00000515355 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
SUB1-213ENST00000515355 MTFR1LQ9H019 292 aa15.21■□□□□ 0.03
SUB1-213ENST00000515355 LY75O60449 1722 aa15.2■□□□□ 0.02
SUB1-213ENST00000515355 CAPN15O75808 1086 aa15.2■□□□□ 0.02
SUB1-213ENST00000515355 CCDC184Q52MB2 194 aa15.2■□□□□ 0.02
SUB1-213ENST00000515355 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
SUB1-213ENST00000515355 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
SUB1-213ENST00000515355 THUMPD2Q9BTF0 503 aaKnown RBP15.2■□□□□ 0.02
SUB1-213ENST00000515355 MRS2Q9HD23 443 aa15.2■□□□□ 0.02
SUB1-213ENST00000515355 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
SUB1-213ENST00000515355 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
SUB1-213ENST00000515355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.19■□□□□ 0.02
SUB1-213ENST00000515355 KCNQ3O43525 872 aa15.19■□□□□ 0.02
SUB1-213ENST00000515355 RTCBQ9Y3I0 505 aaKnown RBP15.19■□□□□ 0.02
SUB1-213ENST00000515355 PAPPAQ13219 1627 aa15.18■□□□□ 0.02
SUB1-213ENST00000515355 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
SUB1-213ENST00000515355 ZNF790Q6PG37 636 aa15.18■□□□□ 0.02
SUB1-213ENST00000515355 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
SUB1-213ENST00000515355 FLAD1Q8NFF5 587 aa15.18■□□□□ 0.02
SUB1-213ENST00000515355 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
SUB1-213ENST00000515355 SCN11AQ9UI33 1791 aa15.18■□□□□ 0.02
SUB1-213ENST00000515355 POLD1P28340 1107 aa15.17■□□□□ 0.02
SUB1-213ENST00000515355 TMPOP42166 694 aaKnown RBP15.17■□□□□ 0.02
SUB1-213ENST00000515355 CRKLP46109 303 aaKnown RBP15.17■□□□□ 0.02
SUB1-213ENST00000515355 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
SUB1-213ENST00000515355 TRAPPC3LQ5T215 181 aa15.17■□□□□ 0.02
SUB1-213ENST00000515355 ZNF496Q96IT1 587 aaPredicted RBP15.17■□□□□ 0.02
SUB1-213ENST00000515355 SLC16A10Q8TF71 515 aa15.16■□□□□ 0.02
SUB1-213ENST00000515355 FMNL2Q96PY5 1086 aa15.16■□□□□ 0.02
SUB1-213ENST00000515355 ZNF330Q9Y3S2 320 aaPredicted RBP15.16■□□□□ 0.02
SUB1-213ENST00000515355 CEMIPQ8WUJ3 1361 aa15.15■□□□□ 0.02
SUB1-213ENST00000515355 SSFA2P28290 1259 aa15.15■□□□□ 0.02
SUB1-213ENST00000515355 RFC4P35249 363 aa15.15■□□□□ 0.02
SUB1-213ENST00000515355 PTGER2P43116 358 aa15.15■□□□□ 0.02
SUB1-213ENST00000515355 ARXQ96QS3 562 aa15.15■□□□□ 0.02
SUB1-213ENST00000515355 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
SUB1-213ENST00000515355 C5P01031 1676 aa15.15■□□□□ 0.02
SUB1-213ENST00000515355 C4BP0C0L5 1744 aa15.14■□□□□ 0.01
SUB1-213ENST00000515355 MRC1P22897 1456 aa15.14■□□□□ 0.01
SUB1-213ENST00000515355 STARD3NLO95772 234 aa15.14■□□□□ 0.01
SUB1-213ENST00000515355 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
SUB1-213ENST00000515355 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
SUB1-213ENST00000515355 RC3H1Q5TC82 1133 aaKnown RBP15.14■□□□□ 0.01
SUB1-213ENST00000515355 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
SUB1-213ENST00000515355 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms