RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 NBPF5PQ86XG9 351 aaPredicted RBP17.06■□□□□ 0.32
TRIO-222ENST00000515144 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
TRIO-222ENST00000515144 DDX11Q96FC9 970 aa17.05■□□□□ 0.32
TRIO-222ENST00000515144 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
TRIO-222ENST00000515144 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
TRIO-222ENST00000515144 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
TRIO-222ENST00000515144 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
TRIO-222ENST00000515144 SLC39A6Q13433 755 aa17.05■□□□□ 0.32
TRIO-222ENST00000515144 DHX8Q14562 1220 aaKnown RBP17.05■□□□□ 0.32
TRIO-222ENST00000515144 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
TRIO-222ENST00000515144 SEPT11Q9NVA2 429 aaKnown RBP17.04■□□□□ 0.32
TRIO-222ENST00000515144 FEZ1Q99689 392 aa17.04■□□□□ 0.32
TRIO-222ENST00000515144 TFCP2L1Q9NZI6 479 aa17.04■□□□□ 0.32
TRIO-222ENST00000515144 SEC63Q9UGP8 760 aaKnown RBP17.04■□□□□ 0.32
TRIO-222ENST00000515144 NUCB2P80303 420 aa17.04■□□□□ 0.32
TRIO-222ENST00000515144 ME1P48163 572 aa17.04■□□□□ 0.32
TRIO-222ENST00000515144 SLC5A1P13866 664 aa17.04■□□□□ 0.32
TRIO-222ENST00000515144 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
TRIO-222ENST00000515144 CA8P35219 290 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 WDR63Q8IWG1 891 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 DDX17Q92841 729 aaKnown RBP17.03■□□□□ 0.32
TRIO-222ENST00000515144 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
TRIO-222ENST00000515144 ANKRD18BA2A2Z9 1011 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 PPM1FP49593 454 aaPredicted RBP17.03■□□□□ 0.32
TRIO-222ENST00000515144 CHD1LQ86WJ1 897 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 LIG1P18858 919 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 ZNF444Q8N0Y2 327 aaPredicted RBP17.03■□□□□ 0.32
TRIO-222ENST00000515144 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
TRIO-222ENST00000515144 CHMP5Q9NZZ3 219 aa17.03■□□□□ 0.32
TRIO-222ENST00000515144 TEX14Q8IWB6 1497 aa17.02■□□□□ 0.32
TRIO-222ENST00000515144 CAGE1Q8TC20 777 aa17.02■□□□□ 0.32
TRIO-222ENST00000515144 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
TRIO-222ENST00000515144 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.32
TRIO-222ENST00000515144 MVPQ14764 893 aaKnown RBP17.02■□□□□ 0.32
TRIO-222ENST00000515144 TMEM87AQ8NBN3 555 aa17.02■□□□□ 0.32
TRIO-222ENST00000515144 NAT10Q9H0A0 1025 aaKnown RBP17.02■□□□□ 0.32
TRIO-222ENST00000515144 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
TRIO-222ENST00000515144 LARP6Q9BRS8 491 aaKnown RBP17.02■□□□□ 0.32
TRIO-222ENST00000515144 NAPBQ9H115 298 aa17.02■□□□□ 0.32
TRIO-222ENST00000515144 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.31
TRIO-222ENST00000515144 IMMTQ16891 758 aaKnown RBP17.01■□□□□ 0.31
TRIO-222ENST00000515144 CAVIN1Q6NZI2 390 aaKnown RBP17.01■□□□□ 0.31
TRIO-222ENST00000515144 DDB1Q16531 1140 aa17.01■□□□□ 0.31
TRIO-222ENST00000515144 SPC24Q8NBT2 197 aa17.01■□□□□ 0.31
TRIO-222ENST00000515144 IFNL2Q8IZJ0 200 aa17.01■□□□□ 0.31
TRIO-222ENST00000515144 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
TRIO-222ENST00000515144 PRPF40AO75400 957 aaKnown RBP17■□□□□ 0.31
TRIO-222ENST00000515144 GUCY1B3Q02153 619 aa17■□□□□ 0.31
TRIO-222ENST00000515144 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
TRIO-222ENST00000515144 SNRKQ9NRH2 765 aa17■□□□□ 0.31
TRIO-222ENST00000515144 JAG2Q9Y219 1238 aa17■□□□□ 0.31
TRIO-222ENST00000515144 UBE3BQ7Z3V4 1068 aa16.99■□□□□ 0.31
TRIO-222ENST00000515144 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
TRIO-222ENST00000515144 VSIG10Q8N0Z9 540 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 LDHAL6AQ6ZMR3 332 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 MPNDQ8N594 471 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 VTI1AQ96AJ9 217 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 CWC25Q9NXE8 425 aaPredicted RBP16.98■□□□□ 0.31
TRIO-222ENST00000515144 HSP90AB3PQ58FF7 597 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 ZRANB1Q9UGI0 708 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
TRIO-222ENST00000515144 LARP1BQ659C4 914 aaKnown RBP16.97■□□□□ 0.31
TRIO-222ENST00000515144 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
TRIO-222ENST00000515144 TTC16Q8NEE8 873 aa16.97■□□□□ 0.31
TRIO-222ENST00000515144 PPIP5K1Q6PFW1 1433 aa16.97■□□□□ 0.31
TRIO-222ENST00000515144 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
TRIO-222ENST00000515144 MAP3K12Q12852 859 aa16.97■□□□□ 0.31
TRIO-222ENST00000515144 MYO1BO43795 1136 aa16.96■□□□□ 0.31
TRIO-222ENST00000515144 TSHZ3Q63HK5 1081 aa16.96■□□□□ 0.31
TRIO-222ENST00000515144 TRIM5Q9C035 493 aa16.96■□□□□ 0.31
TRIO-222ENST00000515144 PICALMQ13492 652 aa16.96■□□□□ 0.31
TRIO-222ENST00000515144 UBA5Q9GZZ9 404 aa16.96■□□□□ 0.31
TRIO-222ENST00000515144 PLS1Q14651 629 aa16.96■□□□□ 0.31
TRIO-222ENST00000515144 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
TRIO-222ENST00000515144 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.3
TRIO-222ENST00000515144 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
TRIO-222ENST00000515144 ANKRD1Q15327 319 aa16.95■□□□□ 0.3
TRIO-222ENST00000515144 FILIP1LQ4L180 1135 aa16.95■□□□□ 0.3
TRIO-222ENST00000515144 CDC5LQ99459 802 aaKnown RBP16.95■□□□□ 0.3
TRIO-222ENST00000515144 PLCD3Q8N3E9 789 aa16.95■□□□□ 0.3
TRIO-222ENST00000515144 GOLIM4O00461 696 aa16.95■□□□□ 0.3
TRIO-222ENST00000515144 RAB11FIP4Q86YS3 637 aa16.95■□□□□ 0.3
TRIO-222ENST00000515144 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRIO-222ENST00000515144 GJA3Q9Y6H8 435 aa16.95■□□□□ 0.3
TRIO-222ENST00000515144 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 NOL7Q9UMY1 257 aaKnown RBP16.94■□□□□ 0.3
TRIO-222ENST00000515144 WDR70Q9NW82 654 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 CTNNA3Q9UI47 895 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 SERPINC1P01008 464 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 VEZTQ9HBM0 779 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
TRIO-222ENST00000515144 DNAAF4Q8WXU2 420 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 PDCP20941 246 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms