RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 SYT17Q9BSW7 474 aa31.05■■■□□ 2.56
CLDND1-230ENST00000514537 POLD1P28340 1107 aa31.04■■■□□ 2.56
CLDND1-230ENST00000514537 NFATC2IPQ8NCF5 419 aa31.03■■■□□ 2.56
CLDND1-230ENST00000514537 TAF1LQ8IZX4 1826 aa31.03■■■□□ 2.56
CLDND1-230ENST00000514537 U2SURPO15042 1029 aaKnown RBP31.02■■■□□ 2.56
CLDND1-230ENST00000514537 PPP2R1AP30153 589 aa31.02■■■□□ 2.56
CLDND1-230ENST00000514537 MTHFSDQ2M296 383 aaKnown RBP31.02■■■□□ 2.56
CLDND1-230ENST00000514537 AMIGO3Q86WK7 504 aa31.02■■■□□ 2.56
CLDND1-230ENST00000514537 SLC4A9Q96Q91 983 aa31.02■■■□□ 2.56
CLDND1-230ENST00000514537 CFAP53Q96M91 514 aa31.01■■■□□ 2.55
CLDND1-230ENST00000514537 C4BP0C0L5 1744 aa31.01■■■□□ 2.55
CLDND1-230ENST00000514537 RBM42Q9BTD8 480 aaKnown RBP30.99■■■□□ 2.55
CLDND1-230ENST00000514537 LGR6Q9HBX8 967 aa30.99■■■□□ 2.55
CLDND1-230ENST00000514537 MAP3K5Q99683 1374 aa30.98■■■□□ 2.55
CLDND1-230ENST00000514537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.97■■■□□ 2.55
CLDND1-230ENST00000514537 DCAF8L1A6NGE4 600 aa30.97■■■□□ 2.55
CLDND1-230ENST00000514537 COL24A1Q17RW2 1714 aa30.97■■■□□ 2.55
CLDND1-230ENST00000514537 RNMTO43148 476 aaKnown RBP30.96■■■□□ 2.55
CLDND1-230ENST00000514537 SSFA2P28290 1259 aa30.96■■■□□ 2.55
CLDND1-230ENST00000514537 SMIM5Q71RC9 77 aa30.96■■■□□ 2.55
CLDND1-230ENST00000514537 SLC52A2Q9HAB3 445 aa30.95■■■□□ 2.55
CLDND1-230ENST00000514537 PHF14O94880 888 aa30.94■■■□□ 2.54
CLDND1-230ENST00000514537 MSL1Q68DK7 614 aa30.94■■■□□ 2.54
CLDND1-230ENST00000514537 GNPATO15228 680 aa30.93■■■□□ 2.54
CLDND1-230ENST00000514537 NUDCQ9Y266 331 aa30.93■■■□□ 2.54
CLDND1-230ENST00000514537 PTCD1O75127 700 aaKnown RBP30.92■■■□□ 2.54
CLDND1-230ENST00000514537 RC3H1Q5TC82 1133 aaKnown RBP30.91■■■□□ 2.54
CLDND1-230ENST00000514537 GAS2L2Q8NHY3 880 aa30.9■■■□□ 2.54
CLDND1-230ENST00000514537 RSPH6AQ9H0K4 717 aa30.89■■■□□ 2.54
CLDND1-230ENST00000514537 ZNF831Q5JPB2 1677 aa30.89■■■□□ 2.54
CLDND1-230ENST00000514537 SCN11AQ9UI33 1791 aa30.89■■■□□ 2.54
CLDND1-230ENST00000514537 UBR3Q6ZT12 1888 aa30.89■■■□□ 2.53
CLDND1-230ENST00000514537 CNTNAP4Q9C0A0 1308 aa30.88■■■□□ 2.53
CLDND1-230ENST00000514537 KLHL34Q8N239 644 aa30.87■■■□□ 2.53
CLDND1-230ENST00000514537 RTCBQ9Y3I0 505 aaKnown RBP30.87■■■□□ 2.53
CLDND1-230ENST00000514537 MRC1P22897 1456 aa30.87■■■□□ 2.53
CLDND1-230ENST00000514537 PRKAR2BP31323 418 aa30.86■■■□□ 2.53
CLDND1-230ENST00000514537 PHACTR3Q96KR7 559 aa30.86■■■□□ 2.53
CLDND1-230ENST00000514537 GNAT3A8MTJ3 354 aa30.85■■■□□ 2.53
CLDND1-230ENST00000514537 U2AF1L5P0DN76 240 aaPredicted RBP30.85■■■□□ 2.53
CLDND1-230ENST00000514537 U2AF1Q01081 240 aaKnown RBP eCLIP30.85■■■□□ 2.53
CLDND1-230ENST00000514537 RPS6KA4O75676 772 aa30.84■■■□□ 2.53
CLDND1-230ENST00000514537 TRAPPC3LQ5T215 181 aa30.84■■■□□ 2.53
CLDND1-230ENST00000514537 FCHSD2O94868 740 aa30.83■■■□□ 2.53
CLDND1-230ENST00000514537 SLC39A6Q13433 755 aa30.83■■■□□ 2.53
CLDND1-230ENST00000514537 IL17REQ8NFR9 667 aa30.83■■■□□ 2.53
CLDND1-230ENST00000514537 ADAMTS7Q9UKP4 1686 aa30.83■■■□□ 2.53
CLDND1-230ENST00000514537 ADRA2BP18089 450 aa30.82■■■□□ 2.52
CLDND1-230ENST00000514537 UTRNP46939 3433 aa30.81■■■□□ 2.52
CLDND1-230ENST00000514537 CRKLP46109 303 aaKnown RBP30.8■■■□□ 2.52
CLDND1-230ENST00000514537 NLGN2Q8NFZ4 835 aa30.8■■■□□ 2.52
CLDND1-230ENST00000514537 ARHGEF1Q92888 912 aaKnown RBP30.8■■■□□ 2.52
CLDND1-230ENST00000514537 COL5A3P25940 1745 aaPredicted RBP30.78■■■□□ 2.52
CLDND1-230ENST00000514537 DDX10Q13206 875 aaKnown RBP30.77■■■□□ 2.52
CLDND1-230ENST00000514537 DNAJC10Q8IXB1 793 aa30.77■■■□□ 2.52
CLDND1-230ENST00000514537 CD2APQ9Y5K6 639 aa30.77■■■□□ 2.52
CLDND1-230ENST00000514537 YY1P25490 414 aa30.76■■■□□ 2.51
CLDND1-230ENST00000514537 TEFQ10587 303 aa30.76■■■□□ 2.51
CLDND1-230ENST00000514537 INTS5Q6P9B9 1019 aaKnown RBP30.76■■■□□ 2.51
CLDND1-230ENST00000514537 VSIG10Q8N0Z9 540 aa30.75■■■□□ 2.51
CLDND1-230ENST00000514537 RFC4P35249 363 aa30.74■■■□□ 2.51
CLDND1-230ENST00000514537 CEMIPQ8WUJ3 1361 aa30.74■■■□□ 2.51
CLDND1-230ENST00000514537 MYH14Q7Z406 1995 aaKnown RBP30.74■■■□□ 2.51
CLDND1-230ENST00000514537 KCPQ6ZWJ8 1503 aa30.73■■■□□ 2.51
CLDND1-230ENST00000514537 RALBP1Q15311 655 aa30.73■■■□□ 2.51
CLDND1-230ENST00000514537 GPR162Q16538 588 aa30.73■■■□□ 2.51
CLDND1-230ENST00000514537 NLGN1Q8N2Q7 840 aa30.73■■■□□ 2.51
CLDND1-230ENST00000514537 CICQ96RK0 1608 aaPredicted RBP30.73■■■□□ 2.51
CLDND1-230ENST00000514537 CYP19A1P11511 503 aaPredicted RBP30.72■■■□□ 2.51
CLDND1-230ENST00000514537 TJP1Q07157 1748 aa30.71■■■□□ 2.51
CLDND1-230ENST00000514537 GYS1P13807 737 aa30.71■■■□□ 2.51
CLDND1-230ENST00000514537 TTC5Q8N0Z6 440 aa30.71■■■□□ 2.51
CLDND1-230ENST00000514537 CCDC87Q9NVE4 849 aa30.71■■■□□ 2.51
CLDND1-230ENST00000514537 GOLGB1Q14789 3259 aaKnown RBP30.71■■■□□ 2.51
CLDND1-230ENST00000514537 MMP10P09238 476 aa30.7■■■□□ 2.51
CLDND1-230ENST00000514537 ZNF790Q6PG37 636 aa30.7■■■□□ 2.51
CLDND1-230ENST00000514537 VIRMAQ69YN4 1812 aaKnown RBP30.69■■■□□ 2.5
CLDND1-230ENST00000514537 RTF1Q92541 710 aaKnown RBP30.67■■■□□ 2.5
CLDND1-230ENST00000514537 ZNF496Q96IT1 587 aaPredicted RBP30.67■■■□□ 2.5
CLDND1-230ENST00000514537 HTATSF1O43719 755 aaKnown RBP30.66■■■□□ 2.5
CLDND1-230ENST00000514537 PELP1Q8IZL8 1130 aaKnown RBP30.66■■■□□ 2.5
CLDND1-230ENST00000514537 SOS1Q07889 1333 aaPredicted RBP30.65■■■□□ 2.5
CLDND1-230ENST00000514537 BTBD11A6QL63 1104 aa30.64■■■□□ 2.5
CLDND1-230ENST00000514537 MCM10Q7L590 875 aa30.64■■■□□ 2.5
CLDND1-230ENST00000514537 PLEKHF1Q96S99 279 aa30.64■■■□□ 2.5
CLDND1-230ENST00000514537 SRP68Q9UHB9 627 aaKnown RBP30.64■■■□□ 2.5
CLDND1-230ENST00000514537 USP42Q9H9J4 1324 aaKnown RBP30.64■■■□□ 2.5
CLDND1-230ENST00000514537 ZBTB1Q9Y2K1 713 aa30.63■■■□□ 2.49
CLDND1-230ENST00000514537 HEG1Q9ULI3 1381 aa30.63■■■□□ 2.49
CLDND1-230ENST00000514537 STARD3NLO95772 234 aa30.62■■■□□ 2.49
CLDND1-230ENST00000514537 YBX3P16989 372 aaKnown RBP eCLIP30.62■■■□□ 2.49
CLDND1-230ENST00000514537 UBR2Q8IWV8 1755 aa30.61■■■□□ 2.49
CLDND1-230ENST00000514537 KCNQ3O43525 872 aa30.61■■■□□ 2.49
CLDND1-230ENST00000514537 NEFMP07197 916 aa30.61■■■□□ 2.49
CLDND1-230ENST00000514537 DCTN1Q14203 1278 aa30.61■■■□□ 2.49
CLDND1-230ENST00000514537 FMNL2Q96PY5 1086 aa30.61■■■□□ 2.49
CLDND1-230ENST00000514537 TEX13AQ9BXU3 409 aaPredicted RBP30.61■■■□□ 2.49
CLDND1-230ENST00000514537 FKBP8Q14318 412 aa30.6■■■□□ 2.49
CLDND1-230ENST00000514537 SIPA1L3O60292 1781 aaPredicted RBP30.59■■■□□ 2.49
CLDND1-230ENST00000514537 GRIN3BO60391 1043 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms