RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 ACSBG1Q96GR2 724 aa8.35□□□□□ -1.07
GYPB-213ENST00000513128 CARD11Q9BXL7 1154 aa8.35□□□□□ -1.07
GYPB-213ENST00000513128 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
GYPB-213ENST00000513128 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
GYPB-213ENST00000513128 SHANK3Q9BYB0 1731 aa8.34□□□□□ -1.07
GYPB-213ENST00000513128 FBLN1P23142 703 aa8.34□□□□□ -1.07
GYPB-213ENST00000513128 SLC15A2Q16348 729 aa8.34□□□□□ -1.07
GYPB-213ENST00000513128 DDX27Q96GQ7 796 aaKnown RBP8.34□□□□□ -1.07
GYPB-213ENST00000513128 ZNF316A6NFI3 1004 aaPredicted RBP8.33□□□□□ -1.08
GYPB-213ENST00000513128 EDC4Q6P2E9 1401 aaKnown RBP8.33□□□□□ -1.08
GYPB-213ENST00000513128 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
GYPB-213ENST00000513128 TUBGCP6Q96RT7 1819 aa8.33□□□□□ -1.08
GYPB-213ENST00000513128 FAM208AQ9UK61 1670 aaKnown RBP8.33□□□□□ -1.08
GYPB-213ENST00000513128 KAT6BQ8WYB5 2073 aa8.33□□□□□ -1.08
GYPB-213ENST00000513128 IL2RBP14784 551 aa8.32□□□□□ -1.08
GYPB-213ENST00000513128 ZNF827Q17R98 1081 aa8.32□□□□□ -1.08
GYPB-213ENST00000513128 MS4A4AQ96JQ5 239 aa8.32□□□□□ -1.08
GYPB-213ENST00000513128 TESK2Q96S53 571 aa8.32□□□□□ -1.08
GYPB-213ENST00000513128 LRRC4BQ9NT99 713 aa8.32□□□□□ -1.08
GYPB-213ENST00000513128 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
GYPB-213ENST00000513128 DOT1LQ8TEK3 1739 aa8.32□□□□□ -1.08
GYPB-213ENST00000513128 CHADLQ6NUI6 762 aa8.31□□□□□ -1.08
GYPB-213ENST00000513128 HDGFL2Q7Z4V5 671 aaPredicted RBP8.31□□□□□ -1.08
GYPB-213ENST00000513128 LTV1Q96GA3 475 aaPredicted RBP8.31□□□□□ -1.08
GYPB-213ENST00000513128 FHDC1Q9C0D6 1143 aaPredicted RBP8.31□□□□□ -1.08
GYPB-213ENST00000513128 LY75O60449 1722 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 QSER1Q2KHR3 1735 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 GPR37O15354 613 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 KCNQ4P56696 695 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 IFNL1Q8IU54 200 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 IP6K1Q92551 441 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 SYT17Q9BSW7 474 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 MTFR1LQ9H019 292 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 TERF2IPQ9NYB0 399 aa8.3□□□□□ -1.08
GYPB-213ENST00000513128 MAP3K19Q56UN5 1328 aa8.29□□□□□ -1.08
GYPB-213ENST00000513128 MEGF6O75095 1541 aa8.29□□□□□ -1.08
GYPB-213ENST00000513128 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
GYPB-213ENST00000513128 PITPNM1O00562 1244 aa8.29□□□□□ -1.08
GYPB-213ENST00000513128 DDX54Q8TDD1 881 aaKnown RBP8.29□□□□□ -1.08
GYPB-213ENST00000513128 NSD2O96028 1365 aa8.29□□□□□ -1.08
GYPB-213ENST00000513128 TONSLQ96HA7 1378 aa8.29□□□□□ -1.08
GYPB-213ENST00000513128 HOXC9P31274 260 aa8.28□□□□□ -1.08
GYPB-213ENST00000513128 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
GYPB-213ENST00000513128 CHD4Q14839 1912 aa8.28□□□□□ -1.08
GYPB-213ENST00000513128 UTRNP46939 3433 aa8.28□□□□□ -1.08
GYPB-213ENST00000513128 PRIM1P49642 420 aaKnown RBP8.27□□□□□ -1.09
GYPB-213ENST00000513128 RRS1Q15050 365 aaKnown RBP8.27□□□□□ -1.09
GYPB-213ENST00000513128 PNPLA7Q6ZV29 1317 aa8.27□□□□□ -1.09
GYPB-213ENST00000513128 KIF20BQ96Q89 1820 aa8.26□□□□□ -1.09
GYPB-213ENST00000513128 ANKRD36BQ8N2N9 1353 aa8.26□□□□□ -1.09
GYPB-213ENST00000513128 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
GYPB-213ENST00000513128 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
GYPB-213ENST00000513128 ZNF784Q8NCA9 323 aaPredicted RBP8.26□□□□□ -1.09
GYPB-213ENST00000513128 SYTL4Q96C24 671 aaPredicted RBP8.26□□□□□ -1.09
GYPB-213ENST00000513128 COG3Q96JB2 828 aa8.26□□□□□ -1.09
GYPB-213ENST00000513128 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
GYPB-213ENST00000513128 RBM42Q9BTD8 480 aaKnown RBP8.26□□□□□ -1.09
GYPB-213ENST00000513128 FYB1O15117 783 aa8.25□□□□□ -1.09
GYPB-213ENST00000513128 PDIA4P13667 645 aaKnown RBP8.25□□□□□ -1.09
GYPB-213ENST00000513128 AMPHP49418 695 aa8.25□□□□□ -1.09
GYPB-213ENST00000513128 CLUAP1Q96AJ1 413 aa8.25□□□□□ -1.09
GYPB-213ENST00000513128 GGNBP2Q9H3C7 697 aa8.25□□□□□ -1.09
GYPB-213ENST00000513128 TOGARAM1Q9Y4F4 1720 aa8.25□□□□□ -1.09
GYPB-213ENST00000513128 C5P01031 1676 aa8.24□□□□□ -1.09
GYPB-213ENST00000513128 MAP3K5Q99683 1374 aa8.24□□□□□ -1.09
GYPB-213ENST00000513128 SLC27A3Q5K4L6 730 aa8.24□□□□□ -1.09
GYPB-213ENST00000513128 CCDC82Q8N4S0 544 aa8.24□□□□□ -1.09
GYPB-213ENST00000513128 ZCRB1Q8TBF4 217 aaKnown RBP8.24□□□□□ -1.09
GYPB-213ENST00000513128 ITGB4P16144 1822 aa8.24□□□□□ -1.09
GYPB-213ENST00000513128 TAF1LQ8IZX4 1826 aa8.24□□□□□ -1.09
GYPB-213ENST00000513128 FLIIQ13045 1269 aa8.23□□□□□ -1.09
GYPB-213ENST00000513128 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
GYPB-213ENST00000513128 NLGN2Q8NFZ4 835 aa8.23□□□□□ -1.09
GYPB-213ENST00000513128 TFCP2L1Q9NZI6 479 aa8.23□□□□□ -1.09
GYPB-213ENST00000513128 FARP1Q9Y4F1 1045 aaPredicted RBP8.23□□□□□ -1.09
GYPB-213ENST00000513128 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 USP47Q96K76 1375 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 DPYSL4O14531 572 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 MAP3K13O43283 966 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 COL23A1Q86Y22 540 aaPredicted RBP8.22□□□□□ -1.09
GYPB-213ENST00000513128 SLC16A10Q8TF71 515 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 EMILIN3Q9NT22 766 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 CCNL1Q9UK58 526 aaPredicted RBP8.22□□□□□ -1.09
GYPB-213ENST00000513128 PKD1L3Q7Z443 1732 aa8.22□□□□□ -1.09
GYPB-213ENST00000513128 ANKRD26Q9UPS8 1709 aa8.21□□□□□ -1.09
GYPB-213ENST00000513128 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.1
GYPB-213ENST00000513128 CCDC102AQ96A19 550 aa8.21□□□□□ -1.1
GYPB-213ENST00000513128 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
GYPB-213ENST00000513128 INSRP06213 1382 aa8.21□□□□□ -1.1
GYPB-213ENST00000513128 MAP2P11137 1827 aaKnown RBP8.2□□□□□ -1.1
GYPB-213ENST00000513128 CYP27B1O15528 508 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 TRAK2O60296 914 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.16e-7■■■□□ 14.8
GYPB-213ENST00000513128 TMF1P82094 1093 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 GPR162Q16538 588 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 PPP1R15BQ5SWA1 713 aa8.2□□□□□ -1.1
GYPB-213ENST00000513128 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms