RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 SYNJ2O15056 1496 aa20.27■□□□□ 0.84
ARHGEF28-212ENST00000513042 CCDC113Q9H0I3 377 aa20.27■□□□□ 0.84
ARHGEF28-212ENST00000513042 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
ARHGEF28-212ENST00000513042 ESPNB1AK53 854 aa20.27■□□□□ 0.83
ARHGEF28-212ENST00000513042 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
ARHGEF28-212ENST00000513042 SLFN5Q08AF3 891 aa20.26■□□□□ 0.83
ARHGEF28-212ENST00000513042 CCDC82Q8N4S0 544 aa20.26■□□□□ 0.83
ARHGEF28-212ENST00000513042 PDCL2Q8N4E4 241 aa20.26■□□□□ 0.83
ARHGEF28-212ENST00000513042 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
ARHGEF28-212ENST00000513042 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
ARHGEF28-212ENST00000513042 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
ARHGEF28-212ENST00000513042 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-212ENST00000513042 SEC63Q9UGP8 760 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-212ENST00000513042 POLR3DP05423 398 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-212ENST00000513042 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 EZRP15311 586 aaKnown RBP20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 UBXN4Q92575 508 aa20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 PRG4Q92954 1404 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 CIZ1Q9ULV3 898 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 FCHSD2O94868 740 aa20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 CBX1P83916 185 aa20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 CCDC178Q5BJE1 867 aa20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 THEMISQ8N1K5 641 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF28-212ENST00000513042 PTCD1O75127 700 aaKnown RBP20.23■□□□□ 0.83
ARHGEF28-212ENST00000513042 SPA17Q15506 151 aa20.23■□□□□ 0.83
ARHGEF28-212ENST00000513042 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
ARHGEF28-212ENST00000513042 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF28-212ENST00000513042 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
ARHGEF28-212ENST00000513042 CPLX3Q8WVH0 158 aa20.22■□□□□ 0.83
ARHGEF28-212ENST00000513042 KIF1BPQ96EK5 621 aa20.22■□□□□ 0.83
ARHGEF28-212ENST00000513042 EHBP1L1Q8N3D4 1523 aa20.22■□□□□ 0.83
ARHGEF28-212ENST00000513042 PTPN14Q15678 1187 aa20.22■□□□□ 0.83
ARHGEF28-212ENST00000513042 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
ARHGEF28-212ENST00000513042 F6X3S4 739 aa20.22■□□□□ 0.83
ARHGEF28-212ENST00000513042 MKNK2Q9HBH9 465 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 DESP17661 470 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 SSFA2P28290 1259 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 CKAP2LQ8IYA6 745 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 CCDC183Q5T5S1 534 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 TMCO3Q6UWJ1 677 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 DYDC1Q8WWB3 177 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 CCDC97Q96F63 343 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-212ENST00000513042 TNNT1P13805 278 aa20.2■□□□□ 0.82
ARHGEF28-212ENST00000513042 TRMT1Q9NXH9 659 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-212ENST00000513042 URI1O94763 535 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF28-212ENST00000513042 SFPQP23246 707 aaKnown RBP eCLIP20.2■□□□□ 0.82
ARHGEF28-212ENST00000513042 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-212ENST00000513042 CRACR2BQ8N4Y2 399 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF28-212ENST00000513042 BCCIPQ9P287 314 aaKnown RBP eCLIP20.2■□□□□ 0.82
ARHGEF28-212ENST00000513042 CACNA2D4Q7Z3S7 1137 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 TSG101Q99816 390 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 CRACR2AQ9BSW2 395 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 NUDT16Q96DE0 195 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 C11orf95C9JLR9 678 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 RANBP6O60518 1105 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 MAP2K1Q02750 393 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 FKBP15Q5T1M5 1219 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 SCLT1Q96NL6 688 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 STARD3NLO95772 234 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 RAB11FIP3O75154 756 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 CCDC144CPQ8IYA2 1237 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
ARHGEF28-212ENST00000513042 TOP1P11387 765 aaKnown RBP20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 SLC4A8Q2Y0W8 1093 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 NAPBQ9H115 298 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 ANO10Q9NW15 660 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 AKAP2Q9Y2D5 859 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 KIF5CO60282 957 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 ZSCAN30Q86W11 494 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 NUP88Q99567 741 aaPredicted RBP20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 LIG1P18858 919 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 CAVIN4Q5BKX8 364 aa20.18■□□□□ 0.82
ARHGEF28-212ENST00000513042 PPP1R12BO60237 982 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 POTEJP0CG39 1038 aa20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 CTNNBL1Q8WYA6 563 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 CCDC96Q2M329 555 aa20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 PPFIA3O75145 1194 aa20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 KIF4BQ2VIQ3 1234 aa20.17■□□□□ 0.82
ARHGEF28-212ENST00000513042 ZSCAN12O43309 604 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 SLC12A7Q9Y666 1083 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 GOLGA6L10A0A0M3HER8 536 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 SSRP1Q08945 709 aaKnown RBP20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 GDPD2Q9HCC8 539 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 ATAD2Q6PL18 1390 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 RAPGEF3O95398 923 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 TMOD3Q9NYL9 352 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 DZIP1Q86YF9 867 aaKnown RBP20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 POLR3GO15318 223 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 TNIP1Q15025 636 aa20.16■□□□□ 0.82
ARHGEF28-212ENST00000513042 TAF7Q15545 349 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-212ENST00000513042 RAB11FIP4Q86YS3 637 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms