RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CEMIPQ8WUJ3 1361 aa14.09□□□□□ -0.15
PFDN1-204ENST00000512707 NKX1-1Q15270 411 aaPredicted RBP14.09□□□□□ -0.15
PFDN1-204ENST00000512707 BABAM1Q9NWV8 329 aa14.09□□□□□ -0.15
PFDN1-204ENST00000512707 THSD7AQ9UPZ6 1657 aa14.08□□□□□ -0.16
PFDN1-204ENST00000512707 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
PFDN1-204ENST00000512707 CABP4P57796 275 aa14.08□□□□□ -0.16
PFDN1-204ENST00000512707 TAF7Q15545 349 aaPredicted RBP14.08□□□□□ -0.16
PFDN1-204ENST00000512707 IL17REQ8NFR9 667 aa14.08□□□□□ -0.16
PFDN1-204ENST00000512707 CDCA7LQ96GN5 454 aa14.08□□□□□ -0.16
PFDN1-204ENST00000512707 ONECUT3O60422 494 aaPredicted RBP14.07□□□□□ -0.16
PFDN1-204ENST00000512707 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
PFDN1-204ENST00000512707 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
PFDN1-204ENST00000512707 LRP5O75197 1615 aa14.07□□□□□ -0.16
PFDN1-204ENST00000512707 SHANK3Q9BYB0 1731 aa14.07□□□□□ -0.16
PFDN1-204ENST00000512707 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
PFDN1-204ENST00000512707 SEPT12Q8IYM1 358 aa14.06□□□□□ -0.16
PFDN1-204ENST00000512707 SLC52A2Q9HAB3 445 aa14.06□□□□□ -0.16
PFDN1-204ENST00000512707 ADAMTS7Q9UKP4 1686 aa14.06□□□□□ -0.16
PFDN1-204ENST00000512707 FANCIQ9NVI1 1328 aa14.06□□□□□ -0.16
PFDN1-204ENST00000512707 SCN11AQ9UI33 1791 aa14.05□□□□□ -0.16
PFDN1-204ENST00000512707 BTBD11A6QL63 1104 aa14.05□□□□□ -0.16
PFDN1-204ENST00000512707 CHL1O00533 1208 aa14.05□□□□□ -0.16
PFDN1-204ENST00000512707 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
PFDN1-204ENST00000512707 DUSP27Q5VZP5 1158 aa14.05□□□□□ -0.16
PFDN1-204ENST00000512707 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
PFDN1-204ENST00000512707 MRC1P22897 1456 aa14.05□□□□□ -0.16
PFDN1-204ENST00000512707 CT47B1P0C2W7 299 aaPredicted RBP14.04□□□□□ -0.16
PFDN1-204ENST00000512707 TRMT2AQ8IZ69 625 aaKnown RBP14.04□□□□□ -0.16
PFDN1-204ENST00000512707 TSR2Q969E8 191 aaKnown RBP14.04□□□□□ -0.16
PFDN1-204ENST00000512707 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
PFDN1-204ENST00000512707 MBIPQ9NS73 344 aa14.04□□□□□ -0.16
PFDN1-204ENST00000512707 TTC5Q8N0Z6 440 aa14.03□□□□□ -0.16
PFDN1-204ENST00000512707 MARCH10Q8NA82 808 aaPredicted RBP14.03□□□□□ -0.16
PFDN1-204ENST00000512707 CHMP4AQ9BY43 222 aa14.03□□□□□ -0.16
PFDN1-204ENST00000512707 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
PFDN1-204ENST00000512707 SYTL4Q96C24 671 aaPredicted RBP14.02□□□□□ -0.17
PFDN1-204ENST00000512707 SOS1Q07889 1333 aaPredicted RBP14.01□□□□□ -0.17
PFDN1-204ENST00000512707 KRT27Q7Z3Y8 459 aa14.01□□□□□ -0.17
PFDN1-204ENST00000512707 DEFB132Q7Z7B7 95 aa14.01□□□□□ -0.17
PFDN1-204ENST00000512707 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
PFDN1-204ENST00000512707 EXOSC9Q06265 439 aaKnown RBP14□□□□□ -0.17
PFDN1-204ENST00000512707 ZNF428Q96B54 188 aa14□□□□□ -0.17
PFDN1-204ENST00000512707 MIS18AQ9NYP9 233 aa14□□□□□ -0.17
PFDN1-204ENST00000512707 SF3B2Q13435 895 aaKnown RBP13.99□□□□□ -0.17
PFDN1-204ENST00000512707 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
PFDN1-204ENST00000512707 RCAN3Q9UKA8 241 aa13.99□□□□□ -0.17
PFDN1-204ENST00000512707 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
PFDN1-204ENST00000512707 BCL9O00512 1426 aa13.98□□□□□ -0.17
PFDN1-204ENST00000512707 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
PFDN1-204ENST00000512707 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
PFDN1-204ENST00000512707 TWISTNBQ3B726 338 aaPredicted RBP13.98□□□□□ -0.17
PFDN1-204ENST00000512707 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
PFDN1-204ENST00000512707 FAM196AQ6ZSG2 479 aa13.98□□□□□ -0.17
PFDN1-204ENST00000512707 TOGARAM1Q9Y4F4 1720 aa13.98□□□□□ -0.17
PFDN1-204ENST00000512707 KDM3BQ7LBC6 1761 aa13.97□□□□□ -0.17
PFDN1-204ENST00000512707 HOXB7P09629 217 aa13.97□□□□□ -0.17
PFDN1-204ENST00000512707 ACSBG1Q96GR2 724 aa13.97□□□□□ -0.17
PFDN1-204ENST00000512707 FMNL2Q96PY5 1086 aa13.97□□□□□ -0.17
PFDN1-204ENST00000512707 EIF4A1P60842 406 aaKnown RBP13.96□□□□□ -0.17
PFDN1-204ENST00000512707 PIGBQ92521 554 aa13.96□□□□□ -0.17
PFDN1-204ENST00000512707 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
PFDN1-204ENST00000512707 SLC39A6Q13433 755 aa13.95□□□□□ -0.18
PFDN1-204ENST00000512707 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
PFDN1-204ENST00000512707 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
PFDN1-204ENST00000512707 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
PFDN1-204ENST00000512707 STK31Q9BXU1 1019 aa13.94□□□□□ -0.18
PFDN1-204ENST00000512707 TNS1Q9HBL0 1735 aaKnown RBP13.94□□□□□ -0.18
PFDN1-204ENST00000512707 PAPPAQ13219 1627 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 ITGB4P16144 1822 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 SNRPA1P09661 255 aaKnown RBP13.93□□□□□ -0.18
PFDN1-204ENST00000512707 BAG6P46379 1132 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
PFDN1-204ENST00000512707 NHSQ6T4R5 1651 aa13.93□□□□□ -0.18
PFDN1-204ENST00000512707 KCNQ3O43525 872 aa13.92□□□□□ -0.18
PFDN1-204ENST00000512707 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
PFDN1-204ENST00000512707 VAMP4O75379 141 aa13.92□□□□□ -0.18
PFDN1-204ENST00000512707 CANXP27824 592 aaKnown RBP13.92□□□□□ -0.18
PFDN1-204ENST00000512707 HDGFL1Q5TGJ6 251 aa13.92□□□□□ -0.18
PFDN1-204ENST00000512707 TSPYL6Q8N831 410 aa13.92□□□□□ -0.18
PFDN1-204ENST00000512707 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
PFDN1-204ENST00000512707 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
PFDN1-204ENST00000512707 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
PFDN1-204ENST00000512707 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
PFDN1-204ENST00000512707 ASAP1Q9ULH1 1129 aa13.92□□□□□ -0.18
PFDN1-204ENST00000512707 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
PFDN1-204ENST00000512707 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-204ENST00000512707 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
PFDN1-204ENST00000512707 KRT24Q2M2I5 525 aa13.91□□□□□ -0.18
PFDN1-204ENST00000512707 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
PFDN1-204ENST00000512707 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-204ENST00000512707 HEG1Q9ULI3 1381 aa13.91□□□□□ -0.18
PFDN1-204ENST00000512707 KCNQ2O43526 872 aa13.9□□□□□ -0.18
PFDN1-204ENST00000512707 NEFLP07196 543 aa13.9□□□□□ -0.18
PFDN1-204ENST00000512707 HMGB2P26583 209 aaKnown RBP13.9□□□□□ -0.18
PFDN1-204ENST00000512707 PALLDQ8WX93 1383 aa13.9□□□□□ -0.18
PFDN1-204ENST00000512707 UBR2Q8IWV8 1755 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms