RNA–Protein interactions for RNA: ENST00000512445.5

SRPK1-212, Transcript of SRSF protein kinase 1, humanhuman

TSL 5

Gene SRPK1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-212ENST00000512445 LOC102724428A0A0B4J2F2 783 aa8.84□□□□□ -0.99
SRPK1-212ENST00000512445 HSP90AB1P08238 724 aaKnown RBP8.84□□□□□ -0.99
SRPK1-212ENST00000512445 SIK1P57059 783 aa8.84□□□□□ -0.99
SRPK1-212ENST00000512445 ITPK1Q13572 414 aa8.84□□□□□ -0.99
SRPK1-212ENST00000512445 NCAPD2Q15021 1401 aa8.84□□□□□ -0.99
SRPK1-212ENST00000512445 COL23A1Q86Y22 540 aaPredicted RBP8.84□□□□□ -0.99
SRPK1-212ENST00000512445 LINC00116Q8NCU8 138 aa8.84□□□□□ -0.99
SRPK1-212ENST00000512445 AK7Q96M32 723 aa8.84□□□□□ -0.99
SRPK1-212ENST00000512445 RREB1Q92766 1687 aa8.84□□□□□ -0.99
SRPK1-212ENST00000512445 PNPLA7Q6ZV29 1317 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 SHANK3Q9BYB0 1731 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 ERVV-2B6SEH9 535 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 PRKAR2BP31323 418 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 SLC39A6Q13433 755 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 AMIGO3Q86WK7 504 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 PHACTR3Q96KR7 559 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 NUDCQ9Y266 331 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 NPC1L1Q9UHC9 1359 aa8.83□□□□□ -1
SRPK1-212ENST00000512445 RNMTO43148 476 aaKnown RBP8.82□□□□□ -1
SRPK1-212ENST00000512445 PTGER2P43116 358 aa8.82□□□□□ -1
SRPK1-212ENST00000512445 AKAP4Q5JQC9 854 aa8.82□□□□□ -1
SRPK1-212ENST00000512445 MTFR1LQ9H019 292 aa8.82□□□□□ -1
SRPK1-212ENST00000512445 RTN4Q9NQC3 1192 aaKnown RBP8.82□□□□□ -1
SRPK1-212ENST00000512445 KDM6AO15550 1401 aaPredicted RBP8.81□□□□□ -1
SRPK1-212ENST00000512445 GNPATO15228 680 aa8.81□□□□□ -1
SRPK1-212ENST00000512445 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
SRPK1-212ENST00000512445 SLC4A9Q96Q91 983 aa8.81□□□□□ -1
SRPK1-212ENST00000512445 ARXQ96QS3 562 aa8.81□□□□□ -1
SRPK1-212ENST00000512445 FHDC1Q9C0D6 1143 aaPredicted RBP8.81□□□□□ -1
SRPK1-212ENST00000512445 KDRP35968 1356 aa8.81□□□□□ -1
SRPK1-212ENST00000512445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.8□□□□□ -1
SRPK1-212ENST00000512445 POLD1P28340 1107 aa8.8□□□□□ -1
SRPK1-212ENST00000512445 ZEB1P37275 1124 aaPredicted RBP8.8□□□□□ -1
SRPK1-212ENST00000512445 MKRN4PQ13434 485 aaPredicted RBP8.8□□□□□ -1
SRPK1-212ENST00000512445 DCTN1Q14203 1278 aa8.8□□□□□ -1
SRPK1-212ENST00000512445 RSPH6AQ9H0K4 717 aa8.8□□□□□ -1
SRPK1-212ENST00000512445 SLC52A2Q9HAB3 445 aa8.8□□□□□ -1
SRPK1-212ENST00000512445 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
SRPK1-212ENST00000512445 TOGARAM1Q9Y4F4 1720 aa8.8□□□□□ -1
SRPK1-212ENST00000512445 COL3A1P02461 1466 aaPredicted RBP8.79□□□□□ -1
SRPK1-212ENST00000512445 GNAT3A8MTJ3 354 aa8.79□□□□□ -1
SRPK1-212ENST00000512445 TEFQ10587 303 aa8.79□□□□□ -1
SRPK1-212ENST00000512445 MCM10Q7L590 875 aa8.79□□□□□ -1
SRPK1-212ENST00000512445 DNAJC10Q8IXB1 793 aa8.79□□□□□ -1
SRPK1-212ENST00000512445 IL17REQ8NFR9 667 aa8.79□□□□□ -1
SRPK1-212ENST00000512445 GAS2L2Q8NHY3 880 aa8.79□□□□□ -1
SRPK1-212ENST00000512445 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
SRPK1-212ENST00000512445 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
SRPK1-212ENST00000512445 RGPD3A6NKT7 1758 aaPredicted RBP8.77□□□□□ -1.01
SRPK1-212ENST00000512445 RGPD4Q7Z3J3 1758 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 KCNQ3O43525 872 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 FCHSD2O94868 740 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 RALBP1Q15311 655 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 TRAPPC3LQ5T215 181 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 CCDC146Q8IYE0 955 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 SLC16A10Q8TF71 515 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 RTF1Q92541 710 aaKnown RBP8.77□□□□□ -1.01
SRPK1-212ENST00000512445 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 SYT17Q9BSW7 474 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 THUMPD2Q9BTF0 503 aaKnown RBP8.77□□□□□ -1.01
SRPK1-212ENST00000512445 MIS18AQ9NYP9 233 aa8.77□□□□□ -1.01
SRPK1-212ENST00000512445 RTCBQ9Y3I0 505 aaKnown RBP8.77□□□□□ -1.01
SRPK1-212ENST00000512445 ZNF330Q9Y3S2 320 aaPredicted RBP8.77□□□□□ -1.01
SRPK1-212ENST00000512445 LRP5O75197 1615 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 MAP3K5Q99683 1374 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 ITGB4P16144 1822 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 NEFMP07197 916 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 CANXP27824 592 aaKnown RBP8.76□□□□□ -1.01
SRPK1-212ENST00000512445 CRKLP46109 303 aaKnown RBP8.76□□□□□ -1.01
SRPK1-212ENST00000512445 NEUROD2Q15784 382 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 TTC5Q8N0Z6 440 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 NLGN2Q8NFZ4 835 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
SRPK1-212ENST00000512445 SRP68Q9UHB9 627 aaKnown RBP8.76□□□□□ -1.01
SRPK1-212ENST00000512445 RRP7AQ9Y3A4 280 aaKnown RBP8.76□□□□□ -1.01
SRPK1-212ENST00000512445 PAPPAQ13219 1627 aa8.76□□□□□ -1.01
SRPK1-212ENST00000512445 BTBD11A6QL63 1104 aa8.75□□□□□ -1.01
SRPK1-212ENST00000512445 CAPN15O75808 1086 aa8.75□□□□□ -1.01
SRPK1-212ENST00000512445 SSFA2P28290 1259 aa8.75□□□□□ -1.01
SRPK1-212ENST00000512445 RFC4P35249 363 aa8.75□□□□□ -1.01
SRPK1-212ENST00000512445 GPR162Q16538 588 aa8.75□□□□□ -1.01
SRPK1-212ENST00000512445 CASZ1Q86V15 1759 aa8.75□□□□□ -1.01
SRPK1-212ENST00000512445 ZNF316A6NFI3 1004 aaPredicted RBP8.74□□□□□ -1.01
SRPK1-212ENST00000512445 RPS6KA4O75676 772 aa8.74□□□□□ -1.01
SRPK1-212ENST00000512445 MMP10P09238 476 aa8.74□□□□□ -1.01
SRPK1-212ENST00000512445 PIP4K2AP48426 406 aaPredicted RBP8.74□□□□□ -1.01
SRPK1-212ENST00000512445 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
SRPK1-212ENST00000512445 ZNF496Q96IT1 587 aaPredicted RBP8.74□□□□□ -1.01
SRPK1-212ENST00000512445 MYBBP1AQ9BQG0 1328 aaKnown RBP8.74□□□□□ -1.01
SRPK1-212ENST00000512445 MAPK8IP3Q9UPT6 1336 aa8.74□□□□□ -1.01
SRPK1-212ENST00000512445 LY75O60449 1722 aa8.74□□□□□ -1.01
SRPK1-212ENST00000512445 PRAMEF22A3QJZ6 481 aa8.73□□□□□ -1.01
SRPK1-212ENST00000512445 CYP19A1P11511 503 aaPredicted RBP8.73□□□□□ -1.01
SRPK1-212ENST00000512445 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
SRPK1-212ENST00000512445 C1QBPQ07021 282 aaKnown RBP8.73□□□□□ -1.01
SRPK1-212ENST00000512445 WDR43Q15061 677 aaKnown RBP eCLIP8.73□□□□□ -1.01
SRPK1-212ENST00000512445 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
SRPK1-212ENST00000512445 ZNF790Q6PG37 636 aa8.73□□□□□ -1.01
SRPK1-212ENST00000512445 CCDC87Q9NVE4 849 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms